RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 EFCAB5A4FU69 1503 aa8.95□□□□□ -0.98
CHKA-208ENST00000533910 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
CHKA-208ENST00000533910 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 NUTM2FA1L443 756 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 ARHGAP33O14559 1287 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 TRIM66O15016 1216 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 DDX12PQ92771 950 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 AXIN2Q9Y2T1 843 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 SNAPC4Q5SXM2 1469 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 SAMD9Q5K651 1589 aa8.93□□□□□ -0.98
CHKA-208ENST00000533910 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
CHKA-208ENST00000533910 PPP4R3BQ5MIZ7 849 aa8.92□□□□□ -0.98
CHKA-208ENST00000533910 OSBPP22059 807 aa8.91□□□□□ -0.98
CHKA-208ENST00000533910 FECHP22830 423 aa8.9□□□□□ -0.98
CHKA-208ENST00000533910 PDE4DQ08499 809 aa8.9□□□□□ -0.98
CHKA-208ENST00000533910 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
CHKA-208ENST00000533910 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
CHKA-208ENST00000533910 IQGAP2Q13576 1575 aa8.9□□□□□ -0.99
CHKA-208ENST00000533910 GRIN2AQ12879 1464 aa8.89□□□□□ -0.99
CHKA-208ENST00000533910 OXER1Q8TDS5 423 aa8.89□□□□□ -0.99
CHKA-208ENST00000533910 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
CHKA-208ENST00000533910 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
CHKA-208ENST00000533910 ADGRD1Q6QNK2 874 aa8.87□□□□□ -0.99
CHKA-208ENST00000533910 ARXQ96QS3 562 aa8.87□□□□□ -0.99
CHKA-208ENST00000533910 UGGT2Q9NYU1 1516 aa8.86□□□□□ -0.99
CHKA-208ENST00000533910 CFAP43Q8NDM7 1665 aa8.86□□□□□ -0.99
CHKA-208ENST00000533910 TK2O00142 265 aa8.86□□□□□ -0.99
CHKA-208ENST00000533910 EVI5O60447 810 aa8.86□□□□□ -0.99
CHKA-208ENST00000533910 PCF11O94913 1555 aaKnown RBP8.86□□□□□ -0.99
CHKA-208ENST00000533910 CEP170Q5SW79 1584 aa8.86□□□□□ -0.99
CHKA-208ENST00000533910 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
CHKA-208ENST00000533910 MAP3K1Q13233 1512 aa8.85□□□□□ -0.99
CHKA-208ENST00000533910 KIAA0586Q9BVV6 1533 aa8.85□□□□□ -0.99
CHKA-208ENST00000533910 CHD1O14646 1710 aa8.84□□□□□ -0.99
CHKA-208ENST00000533910 NUP160Q12769 1436 aa8.84□□□□□ -0.99
CHKA-208ENST00000533910 PSEN2P49810 448 aa8.83□□□□□ -1
CHKA-208ENST00000533910 STAC3Q96MF2 364 aa8.83□□□□□ -1
CHKA-208ENST00000533910 FAM117AQ9C073 453 aa8.83□□□□□ -1
CHKA-208ENST00000533910 FYCO1Q9BQS8 1478 aa8.83□□□□□ -1
CHKA-208ENST00000533910 FHOD3Q2V2M9 1422 aa8.82□□□□□ -1
CHKA-208ENST00000533910 IRF6O14896 467 aa8.82□□□□□ -1
CHKA-208ENST00000533910 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
CHKA-208ENST00000533910 ZNF454Q8N9F8 522 aa8.82□□□□□ -1
CHKA-208ENST00000533910 KIAA0556O60303 1618 aa8.82□□□□□ -1
CHKA-208ENST00000533910 TIAM1Q13009 1591 aa8.82□□□□□ -1
CHKA-208ENST00000533910 GNPATO15228 680 aa8.81□□□□□ -1
CHKA-208ENST00000533910 KCNK17Q96T54 332 aa8.81□□□□□ -1
CHKA-208ENST00000533910 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
CHKA-208ENST00000533910 MINK1Q8N4C8 1332 aaPredicted RBP8.8□□□□□ -1
CHKA-208ENST00000533910 FMN1Q68DA7 1419 aa8.8□□□□□ -1
CHKA-208ENST00000533910 RANGAP1P46060 587 aaPredicted RBP8.8□□□□□ -1
CHKA-208ENST00000533910 MAP2K5Q13163 448 aa8.8□□□□□ -1
CHKA-208ENST00000533910 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
CHKA-208ENST00000533910 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
CHKA-208ENST00000533910 HCSTQ9UBK5 93 aa8.8□□□□□ -1
CHKA-208ENST00000533910 LRRIQ1Q96JM4 1722 aa8.8□□□□□ -1
CHKA-208ENST00000533910 CASKIN1Q8WXD9 1431 aa8.8□□□□□ -1
CHKA-208ENST00000533910 FCHSD2O94868 740 aa8.79□□□□□ -1
CHKA-208ENST00000533910 DISP1Q96F81 1524 aa8.79□□□□□ -1
CHKA-208ENST00000533910 HRO43593 1189 aa8.78□□□□□ -1
CHKA-208ENST00000533910 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
CHKA-208ENST00000533910 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
CHKA-208ENST00000533910 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
CHKA-208ENST00000533910 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
CHKA-208ENST00000533910 PTGDRQ13258 359 aa8.77□□□□□ -1.01
CHKA-208ENST00000533910 PARP9Q8IXQ6 854 aa8.77□□□□□ -1.01
CHKA-208ENST00000533910 PCGF6Q9BYE7 350 aa8.77□□□□□ -1.01
CHKA-208ENST00000533910 BCL2L12Q9HB09 334 aa8.77□□□□□ -1.01
CHKA-208ENST00000533910 HECW1Q76N89 1606 aa8.76□□□□□ -1.01
CHKA-208ENST00000533910 PTPREP23469 700 aa8.76□□□□□ -1.01
CHKA-208ENST00000533910 FOSBP53539 338 aa8.76□□□□□ -1.01
CHKA-208ENST00000533910 HIC1Q14526 733 aa8.76□□□□□ -1.01
CHKA-208ENST00000533910 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
CHKA-208ENST00000533910 CHMP7Q8WUX9 453 aaPredicted RBP8.75□□□□□ -1.01
CHKA-208ENST00000533910 TSR1Q2NL82 804 aaKnown RBP8.74□□□□□ -1.01
CHKA-208ENST00000533910 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
CHKA-208ENST00000533910 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
CHKA-208ENST00000533910 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
CHKA-208ENST00000533910 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
CHKA-208ENST00000533910 LRRC9Q6ZRR7 1453 aa8.74□□□□□ -1.01
CHKA-208ENST00000533910 CLASP1Q7Z460 1538 aa8.74□□□□□ -1.01
CHKA-208ENST00000533910 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
CHKA-208ENST00000533910 AMHR2Q16671 573 aa8.73□□□□□ -1.01
CHKA-208ENST00000533910 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
CHKA-208ENST00000533910 VPS9D1Q9Y2B5 631 aa8.73□□□□□ -1.01
CHKA-208ENST00000533910 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
CHKA-208ENST00000533910 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
CHKA-208ENST00000533910 FAM161AQ3B820 660 aa8.72□□□□□ -1.01
CHKA-208ENST00000533910 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
CHKA-208ENST00000533910 MAP3K7O43318 606 aa8.71□□□□□ -1.02
CHKA-208ENST00000533910 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.02
CHKA-208ENST00000533910 EHBP1L1Q8N3D4 1523 aa8.7□□□□□ -1.02
CHKA-208ENST00000533910 MS4A1P11836 297 aa8.7□□□□□ -1.02
CHKA-208ENST00000533910 EN1Q05925 392 aaPredicted RBP8.7□□□□□ -1.02
CHKA-208ENST00000533910 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
CHKA-208ENST00000533910 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
CHKA-208ENST00000533910 CARMIL2Q6F5E8 1435 aa8.7□□□□□ -1.02
CHKA-208ENST00000533910 RRBP1Q9P2E9 1410 aaKnown RBP8.7□□□□□ -1.02
CHKA-208ENST00000533910 KANK4Q5T7N3 995 aaPredicted RBP8.69□□□□□ -1.02
CHKA-208ENST00000533910 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms