RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 ARHGEF28Q8N1W1 1705 aaKnown RBP6□□□□□ -1.45
CTSC-208ENST00000533897 ANKRD26Q9UPS8 1709 aa6□□□□□ -1.45
CTSC-208ENST00000533897 TRMT2AQ8IZ69 625 aaKnown RBP6□□□□□ -1.45
CTSC-208ENST00000533897 ERVK-7P63135 1459 aa6□□□□□ -1.45
CTSC-208ENST00000533897 PLEKHD1A6NEE1 506 aa5.99□□□□□ -1.45
CTSC-208ENST00000533897 CARD11Q9BXL7 1154 aa5.99□□□□□ -1.45
CTSC-208ENST00000533897 SCAF11Q99590 1463 aaKnown RBP5.99□□□□□ -1.45
CTSC-208ENST00000533897 ADGRB2O60241 1585 aa5.99□□□□□ -1.45
CTSC-208ENST00000533897 HECW2Q9P2P5 1572 aa5.99□□□□□ -1.45
CTSC-208ENST00000533897 PDE3BQ13370 1112 aa5.98□□□□□ -1.45
CTSC-208ENST00000533897 CLTCQ00610 1675 aaKnown RBP5.98□□□□□ -1.45
CTSC-208ENST00000533897 NLRP13Q86W25 1043 aa5.98□□□□□ -1.45
CTSC-208ENST00000533897 PLEKHH1Q9ULM0 1364 aa5.98□□□□□ -1.45
CTSC-208ENST00000533897 UGGT1Q9NYU2 1555 aa5.98□□□□□ -1.45
CTSC-208ENST00000533897 DCAF11Q8TEB1 546 aa5.97□□□□□ -1.45
CTSC-208ENST00000533897 NLRP1Q9C000 1473 aa5.97□□□□□ -1.45
CTSC-208ENST00000533897 AMER1Q5JTC6 1135 aaPredicted RBP5.97□□□□□ -1.45
CTSC-208ENST00000533897 FANCAO15360 1455 aa5.97□□□□□ -1.45
CTSC-208ENST00000533897 CAMSAP1Q5T5Y3 1602 aa5.97□□□□□ -1.45
CTSC-208ENST00000533897 SBNO2Q9Y2G9 1366 aa5.96□□□□□ -1.46
CTSC-208ENST00000533897 IPO9Q96P70 1041 aaKnown RBP5.96□□□□□ -1.46
CTSC-208ENST00000533897 SETD1AO15047 1707 aaKnown RBP5.96□□□□□ -1.46
CTSC-208ENST00000533897 ZNF777Q9ULD5 760 aaPredicted RBP5.95□□□□□ -1.46
CTSC-208ENST00000533897 NOP58Q9Y2X3 529 aaKnown RBP5.95□□□□□ -1.46
CTSC-208ENST00000533897 EXOC6Q8TAG9 804 aa5.95□□□□□ -1.46
CTSC-208ENST00000533897 BACH2Q9BYV9 841 aa5.95□□□□□ -1.46
CTSC-208ENST00000533897 TSPY4P0CV99 314 aa5.95□□□□□ -1.46
CTSC-208ENST00000533897 TSPY10P0CW01 314 aa5.95□□□□□ -1.46
CTSC-208ENST00000533897 MS4A1P11836 297 aa5.95□□□□□ -1.46
CTSC-208ENST00000533897 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
CTSC-208ENST00000533897 RCAN3Q9UKA8 241 aa5.94□□□□□ -1.46
CTSC-208ENST00000533897 MYT1LQ9UL68 1186 aa5.94□□□□□ -1.46
CTSC-208ENST00000533897 CFAP74Q9C0B2 1584 aa5.94□□□□□ -1.46
CTSC-208ENST00000533897 MYO5BQ9ULV0 1848 aa5.94□□□□□ -1.46
CTSC-208ENST00000533897 RICTORQ6R327 1708 aa5.94□□□□□ -1.46
CTSC-208ENST00000533897 DUSP27Q5VZP5 1158 aa5.94□□□□□ -1.46
CTSC-208ENST00000533897 NEXMIFQ5QGS0 1516 aa5.93□□□□□ -1.46
CTSC-208ENST00000533897 TMC1Q8TDI8 760 aa5.93□□□□□ -1.46
CTSC-208ENST00000533897 GLI2P10070 1586 aa5.93□□□□□ -1.46
CTSC-208ENST00000533897 TCERG1O14776 1098 aaKnown RBP5.93□□□□□ -1.46
CTSC-208ENST00000533897 PANK3Q9H999 370 aa5.93□□□□□ -1.46
CTSC-208ENST00000533897 ABCC3O15438 1527 aa5.93□□□□□ -1.46
CTSC-208ENST00000533897 TULP4Q9NRJ4 1543 aa5.92□□□□□ -1.46
CTSC-208ENST00000533897 STAC3Q96MF2 364 aa5.92□□□□□ -1.46
CTSC-208ENST00000533897 PHF23Q9BUL5 403 aaPredicted RBP5.92□□□□□ -1.46
CTSC-208ENST00000533897 COL3A1P02461 1466 aaPredicted RBP5.92□□□□□ -1.46
CTSC-208ENST00000533897 CDC42BPGQ6DT37 1551 aa5.92□□□□□ -1.46
CTSC-208ENST00000533897 PPP2R1AP30153 589 aa5.92□□□□□ -1.46
CTSC-208ENST00000533897 EIF3AQ14152 1382 aaKnown RBP5.92□□□□□ -1.46
CTSC-208ENST00000533897 C20orf194Q5TEA3 1177 aa5.91□□□□□ -1.46
CTSC-208ENST00000533897 CCDC136Q96JN2 1154 aa5.91□□□□□ -1.46
CTSC-208ENST00000533897 KDM2AQ9Y2K7 1162 aa5.91□□□□□ -1.46
CTSC-208ENST00000533897 KIF20BQ96Q89 1820 aa5.91□□□□□ -1.46
CTSC-208ENST00000533897 PDE4AP27815 886 aa5.9□□□□□ -1.46
CTSC-208ENST00000533897 NKTRP30414 1462 aaKnown RBP5.9□□□□□ -1.46
CTSC-208ENST00000533897 ZNF326Q5BKZ1 582 aaKnown RBP5.9□□□□□ -1.46
CTSC-208ENST00000533897 ADAMTS8Q9UP79 889 aa5.9□□□□□ -1.46
CTSC-208ENST00000533897 KANK1Q14678 1352 aa5.9□□□□□ -1.46
CTSC-208ENST00000533897 TMEM131LA2VDJ0 1609 aa5.9□□□□□ -1.46
CTSC-208ENST00000533897 ADGRL1O94910 1474 aa5.9□□□□□ -1.47
CTSC-208ENST00000533897 MLH3Q9UHC1 1453 aa5.9□□□□□ -1.47
CTSC-208ENST00000533897 POLR3AO14802 1390 aaPredicted RBP5.9□□□□□ -1.47
CTSC-208ENST00000533897 DEKP35659 375 aaKnown RBP5.9□□□□□ -1.47
CTSC-208ENST00000533897 C8orf34Q49A92 452 aa5.9□□□□□ -1.47
CTSC-208ENST00000533897 SPINK5Q9NQ38 1064 aaPredicted RBP5.9□□□□□ -1.47
CTSC-208ENST00000533897 USP19O94966 1318 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 DIP2CQ9Y2E4 1556 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 RIMBP3CA6NJZ7 1639 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 RIMBP3BA6NNM3 1639 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 RIMBP3Q9UFD9 1639 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 SLFN5Q08AF3 891 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 NOS1P29475 1434 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 ZMYM3Q14202 1370 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 PREX1Q8TCU6 1659 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 CARD14Q9BXL6 1004 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 CRBNQ96SW2 442 aa5.89□□□□□ -1.47
CTSC-208ENST00000533897 TMF1P82094 1093 aa5.88□□□□□ -1.47
CTSC-208ENST00000533897 AEBP2Q6ZN18 517 aaPredicted RBP5.88□□□□□ -1.47
CTSC-208ENST00000533897 NPATQ14207 1427 aa5.88□□□□□ -1.47
CTSC-208ENST00000533897 CD163L1Q9NR16 1453 aa5.88□□□□□ -1.47
CTSC-208ENST00000533897 SKAP1Q86WV1 359 aa5.88□□□□□ -1.47
CTSC-208ENST00000533897 DMRT2Q9Y5R5 561 aa5.88□□□□□ -1.47
CTSC-208ENST00000533897 POGZQ7Z3K3 1410 aa5.87□□□□□ -1.47
CTSC-208ENST00000533897 PLIN1O60240 522 aa5.87□□□□□ -1.47
CTSC-208ENST00000533897 NCBP3Q53F19 620 aaKnown RBP5.87□□□□□ -1.47
CTSC-208ENST00000533897 MED14O60244 1454 aa5.87□□□□□ -1.47
CTSC-208ENST00000533897 SENP3-EIF4A1A0A087X0R7 540 aa5.87□□□□□ -1.47
CTSC-208ENST00000533897 FBLN2P98095 1184 aa5.87□□□□□ -1.47
CTSC-208ENST00000533897 TUBGCP6Q96RT7 1819 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 ZFYVE9O95405 1425 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 CC2D1BQ5T0F9 858 aaKnown RBP5.86□□□□□ -1.47
CTSC-208ENST00000533897 PTPRMP28827 1452 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 ARHGAP31Q2M1Z3 1444 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 EFCAB2Q5VUJ9 269 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 NRXN3Q9Y4C0 1643 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 ADGRF5Q8IZF2 1346 aa5.86□□□□□ -1.47
CTSC-208ENST00000533897 SLC24A1O60721 1099 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 NINLQ9Y2I6 1382 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 RGL3Q3MIN7 710 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms