RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
BRCA2-205ENST00000533776 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
BRCA2-205ENST00000533776 SLC19A1P41440 591 aa8.6□□□□□ -1.03
BRCA2-205ENST00000533776 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
BRCA2-205ENST00000533776 PNMA3Q9UL41 463 aa8.6□□□□□ -1.03
BRCA2-205ENST00000533776 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
BRCA2-205ENST00000533776 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
BRCA2-205ENST00000533776 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
BRCA2-205ENST00000533776 SPRYD7Q5W111 196 aa8.59□□□□□ -1.03
BRCA2-205ENST00000533776 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
BRCA2-205ENST00000533776 TATDN2Q93075 761 aa8.58□□□□□ -1.04
BRCA2-205ENST00000533776 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
BRCA2-205ENST00000533776 PADI6Q6TGC4 694 aa8.57□□□□□ -1.04
BRCA2-205ENST00000533776 GDF9O60383 454 aa8.56□□□□□ -1.04
BRCA2-205ENST00000533776 NUDT18Q6ZVK8 323 aa8.56□□□□□ -1.04
BRCA2-205ENST00000533776 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
BRCA2-205ENST00000533776 P3H3Q8IVL6 736 aa8.55□□□□□ -1.04
BRCA2-205ENST00000533776 NPDC1Q9NQX5 325 aaPredicted RBP8.55□□□□□ -1.04
BRCA2-205ENST00000533776 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
BRCA2-205ENST00000533776 DACH1Q9UI36 760 aa8.54□□□□□ -1.04
BRCA2-205ENST00000533776 RNF40O75150 1001 aa8.53□□□□□ -1.04
BRCA2-205ENST00000533776 APLP1P51693 650 aa8.53□□□□□ -1.04
BRCA2-205ENST00000533776 CRIPAKQ8N1N5 446 aa8.53□□□□□ -1.04
BRCA2-205ENST00000533776 RNF223E7ERA6 249 aa8.52□□□□□ -1.05
BRCA2-205ENST00000533776 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
BRCA2-205ENST00000533776 GMPR2Q9P2T1 348 aaKnown RBP8.51□□□□□ -1.05
BRCA2-205ENST00000533776 C11orf95C9JLR9 678 aaPredicted RBP8.5□□□□□ -1.05
BRCA2-205ENST00000533776 TNFRSF10AO00220 468 aa8.5□□□□□ -1.05
BRCA2-205ENST00000533776 SEMA3EO15041 775 aa8.5□□□□□ -1.05
BRCA2-205ENST00000533776 NUTM2FA1L443 756 aa8.49□□□□□ -1.05
BRCA2-205ENST00000533776 HDGFP51858 240 aaKnown RBP8.49□□□□□ -1.05
BRCA2-205ENST00000533776 HAP1P54257 671 aaPredicted RBP8.49□□□□□ -1.05
BRCA2-205ENST00000533776 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
BRCA2-205ENST00000533776 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
BRCA2-205ENST00000533776 PTGDRQ13258 359 aa8.47□□□□□ -1.05
BRCA2-205ENST00000533776 SWT1Q5T5J6 900 aaKnown RBP8.47□□□□□ -1.05
BRCA2-205ENST00000533776 ZPR1O75312 459 aa8.46□□□□□ -1.06
BRCA2-205ENST00000533776 COPS2P61201 443 aa8.46□□□□□ -1.06
BRCA2-205ENST00000533776 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
BRCA2-205ENST00000533776 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
BRCA2-205ENST00000533776 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
BRCA2-205ENST00000533776 EYA1Q99502 592 aa8.44□□□□□ -1.06
BRCA2-205ENST00000533776 AVPP01185 164 aa8.43□□□□□ -1.06
BRCA2-205ENST00000533776 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
BRCA2-205ENST00000533776 SLF2Q8IX21 1173 aa8.42□□□□□ -1.06
BRCA2-205ENST00000533776 ANKLE1Q8NAG6 615 aa8.42□□□□□ -1.06
BRCA2-205ENST00000533776 FCHSD2O94868 740 aa8.41□□□□□ -1.06
BRCA2-205ENST00000533776 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
BRCA2-205ENST00000533776 TESPA1A2RU30 521 aaPredicted RBP8.4□□□□□ -1.06
BRCA2-205ENST00000533776 DNAJB2P25686 324 aa8.4□□□□□ -1.06
BRCA2-205ENST00000533776 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
BRCA2-205ENST00000533776 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
BRCA2-205ENST00000533776 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
BRCA2-205ENST00000533776 RBM26Q5T8P6 1007 aaKnown RBP8.39□□□□□ -1.07
BRCA2-205ENST00000533776 AXIN1O15169 862 aa8.38□□□□□ -1.07
BRCA2-205ENST00000533776 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
BRCA2-205ENST00000533776 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
BRCA2-205ENST00000533776 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
BRCA2-205ENST00000533776 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
BRCA2-205ENST00000533776 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
BRCA2-205ENST00000533776 KDM2AQ9Y2K7 1162 aa8.37□□□□□ -1.07
BRCA2-205ENST00000533776 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
BRCA2-205ENST00000533776 ZSCAN1Q8NBB4 408 aa8.36□□□□□ -1.07
BRCA2-205ENST00000533776 TMEM134Q9H6X4 195 aa8.36□□□□□ -1.07
BRCA2-205ENST00000533776 LMOD2Q6P5Q4 547 aa8.35□□□□□ -1.07
BRCA2-205ENST00000533776 HIC1Q14526 733 aa8.34□□□□□ -1.07
BRCA2-205ENST00000533776 SNRPBP14678 240 aaKnown RBP8.33□□□□□ -1.08
BRCA2-205ENST00000533776 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
BRCA2-205ENST00000533776 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
BRCA2-205ENST00000533776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.32□□□□□ -1.08
BRCA2-205ENST00000533776 FECHP22830 423 aa8.32□□□□□ -1.08
BRCA2-205ENST00000533776 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
BRCA2-205ENST00000533776 TOR4AQ9NXH8 423 aa8.32□□□□□ -1.08
BRCA2-205ENST00000533776 GNPATO15228 680 aa8.31□□□□□ -1.08
BRCA2-205ENST00000533776 GPR37O15354 613 aa8.31□□□□□ -1.08
BRCA2-205ENST00000533776 CFHP08603 1231 aa8.31□□□□□ -1.08
BRCA2-205ENST00000533776 BLOC1S3Q6QNY0 202 aa8.31□□□□□ -1.08
BRCA2-205ENST00000533776 S1PR4O95977 384 aa8.3□□□□□ -1.08
BRCA2-205ENST00000533776 OATP04181 439 aa8.3□□□□□ -1.08
BRCA2-205ENST00000533776 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
BRCA2-205ENST00000533776 SLC10A3P09131 477 aa8.29□□□□□ -1.08
BRCA2-205ENST00000533776 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
BRCA2-205ENST00000533776 METTL3Q86U44 580 aaKnown RBP8.29□□□□□ -1.08
BRCA2-205ENST00000533776 GPIHBP1Q8IV16 184 aa8.29□□□□□ -1.08
BRCA2-205ENST00000533776 TLL1O43897 1013 aa8.28□□□□□ -1.08
BRCA2-205ENST00000533776 FOXC1Q12948 553 aa8.28□□□□□ -1.08
BRCA2-205ENST00000533776 GMPRP36959 345 aa8.27□□□□□ -1.09
BRCA2-205ENST00000533776 TRIM47Q96LD4 638 aa8.27□□□□□ -1.09
BRCA2-205ENST00000533776 ACTN4O43707 911 aaKnown RBP8.26□□□□□ -1.09
BRCA2-205ENST00000533776 VSIG10Q8N0Z9 540 aa8.26□□□□□ -1.09
BRCA2-205ENST00000533776 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
BRCA2-205ENST00000533776 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
BRCA2-205ENST00000533776 ATP13A2Q9NQ11 1180 aa8.25□□□□□ -1.09
BRCA2-205ENST00000533776 GSK3AP49840 483 aa8.23□□□□□ -1.09
BRCA2-205ENST00000533776 RDH13Q8NBN7 331 aa8.23□□□□□ -1.09
BRCA2-205ENST00000533776 SLC16A10Q8TF71 515 aa8.23□□□□□ -1.09
BRCA2-205ENST00000533776 RSPH4AQ5TD94 716 aa8.22□□□□□ -1.09
BRCA2-205ENST00000533776 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
BRCA2-205ENST00000533776 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
BRCA2-205ENST00000533776 PUS10Q3MIT2 529 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms