RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
CASP4-212ENST00000533730 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
CASP4-212ENST00000533730 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
CASP4-212ENST00000533730 DPYSL4O14531 572 aa12.1□□□□□ -0.47
CASP4-212ENST00000533730 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
CASP4-212ENST00000533730 ARID3CA6NKF2 412 aa12.09□□□□□ -0.47
CASP4-212ENST00000533730 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
CASP4-212ENST00000533730 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
CASP4-212ENST00000533730 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
CASP4-212ENST00000533730 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
CASP4-212ENST00000533730 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
CASP4-212ENST00000533730 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
CASP4-212ENST00000533730 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
CASP4-212ENST00000533730 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
CASP4-212ENST00000533730 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
CASP4-212ENST00000533730 TBC1D12O60347 775 aa12.05□□□□□ -0.48
CASP4-212ENST00000533730 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
CASP4-212ENST00000533730 KHSRPQ92945 711 aaKnown RBP eCLIP12.05□□□□□ -0.48
CASP4-212ENST00000533730 KCNH8Q96L42 1107 aa12.05□□□□□ -0.48
CASP4-212ENST00000533730 ST18O60284 1047 aa12.04□□□□□ -0.48
CASP4-212ENST00000533730 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
CASP4-212ENST00000533730 PDIA6Q15084 440 aa12.04□□□□□ -0.48
CASP4-212ENST00000533730 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
CASP4-212ENST00000533730 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
CASP4-212ENST00000533730 MAP3K4Q9Y6R4 1608 aa12.04□□□□□ -0.48
CASP4-212ENST00000533730 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
CASP4-212ENST00000533730 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
CASP4-212ENST00000533730 ZMYND10O75800 440 aa12.03□□□□□ -0.48
CASP4-212ENST00000533730 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
CASP4-212ENST00000533730 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.49
CASP4-212ENST00000533730 CD109Q6YHK3 1445 aa12.02□□□□□ -0.49
CASP4-212ENST00000533730 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
CASP4-212ENST00000533730 EVI5O60447 810 aa12.01□□□□□ -0.49
CASP4-212ENST00000533730 TROQ12816 1431 aaPredicted RBP12.01□□□□□ -0.49
CASP4-212ENST00000533730 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
CASP4-212ENST00000533730 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
CASP4-212ENST00000533730 NUDT7P0C024 238 aa11.99□□□□□ -0.49
CASP4-212ENST00000533730 FAM163AQ96GL9 167 aaPredicted RBP11.99□□□□□ -0.49
CASP4-212ENST00000533730 TSPOAP1O95153 1857 aa11.99□□□□□ -0.49
CASP4-212ENST00000533730 KIF14Q15058 1648 aa11.98□□□□□ -0.49
CASP4-212ENST00000533730 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
CASP4-212ENST00000533730 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
CASP4-212ENST00000533730 PTGER2P43116 358 aa11.97□□□□□ -0.49
CASP4-212ENST00000533730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
CASP4-212ENST00000533730 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
CASP4-212ENST00000533730 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
CASP4-212ENST00000533730 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
CASP4-212ENST00000533730 MAP3K1Q13233 1512 aa11.94□□□□□ -0.5
CASP4-212ENST00000533730 NEO1Q92859 1461 aa11.94□□□□□ -0.5
CASP4-212ENST00000533730 KDM6BO15054 1643 aa11.93□□□□□ -0.5
CASP4-212ENST00000533730 TTC37Q6PGP7 1564 aa11.93□□□□□ -0.5
CASP4-212ENST00000533730 EHBP1L1Q8N3D4 1523 aa11.93□□□□□ -0.5
CASP4-212ENST00000533730 ARAP3Q8WWN8 1544 aa11.93□□□□□ -0.5
CASP4-212ENST00000533730 CFAP74Q9C0B2 1584 aa11.92□□□□□ -0.5
CASP4-212ENST00000533730 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
CASP4-212ENST00000533730 PLCH2O75038 1416 aa11.92□□□□□ -0.5
CASP4-212ENST00000533730 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
CASP4-212ENST00000533730 MLLT3P42568 568 aaPredicted RBP11.91□□□□□ -0.5
CASP4-212ENST00000533730 FANCAO15360 1455 aa11.9□□□□□ -0.5
CASP4-212ENST00000533730 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
CASP4-212ENST00000533730 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
CASP4-212ENST00000533730 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.5
CASP4-212ENST00000533730 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
CASP4-212ENST00000533730 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
CASP4-212ENST00000533730 DDX12PQ92771 950 aa11.88□□□□□ -0.51
CASP4-212ENST00000533730 FOSBP53539 338 aa11.87□□□□□ -0.51
CASP4-212ENST00000533730 AK7Q96M32 723 aa11.87□□□□□ -0.51
CASP4-212ENST00000533730 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
CASP4-212ENST00000533730 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 PREX2Q70Z35 1606 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 PHF14O94880 888 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 PODXL2Q9NZ53 605 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 PCDHGA10Q9Y5H3 936 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
CASP4-212ENST00000533730 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
CASP4-212ENST00000533730 COL17A1Q9UMD9 1497 aaPredicted RBP11.85□□□□□ -0.51
CASP4-212ENST00000533730 EMP3P54852 163 aa11.85□□□□□ -0.51
CASP4-212ENST00000533730 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
CASP4-212ENST00000533730 OSBPP22059 807 aa11.84□□□□□ -0.51
CASP4-212ENST00000533730 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
CASP4-212ENST00000533730 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
CASP4-212ENST00000533730 GPATCH8Q9UKJ3 1502 aaKnown RBP11.84□□□□□ -0.51
CASP4-212ENST00000533730 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 GRXCR2A6NFK2 248 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 ITSN2Q9NZM3 1697 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 CDC42BPBQ9Y5S2 1711 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
CASP4-212ENST00000533730 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
CASP4-212ENST00000533730 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
CASP4-212ENST00000533730 ZNF454Q8N9F8 522 aa11.82□□□□□ -0.52
CASP4-212ENST00000533730 EPAS1Q99814 870 aa11.82□□□□□ -0.52
CASP4-212ENST00000533730 ZMYND15Q9H091 742 aa11.82□□□□□ -0.52
CASP4-212ENST00000533730 ERBB3P21860 1342 aa11.82□□□□□ -0.52
CASP4-212ENST00000533730 SCAPERQ9BY12 1400 aa11.81□□□□□ -0.52
CASP4-212ENST00000533730 GPIHBP1Q8IV16 184 aa11.81□□□□□ -0.52
CASP4-212ENST00000533730 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms