RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
CLP1-205ENST00000533682 PANK3Q9H999 370 aa16.3■□□□□ 0.2
CLP1-205ENST00000533682 FKBP8Q14318 412 aa16.29■□□□□ 0.2
CLP1-205ENST00000533682 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
CLP1-205ENST00000533682 BCANQ96GW7 911 aa16.29■□□□□ 0.2
CLP1-205ENST00000533682 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
CLP1-205ENST00000533682 NOS1P29475 1434 aa16.29■□□□□ 0.2
CLP1-205ENST00000533682 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
CLP1-205ENST00000533682 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
CLP1-205ENST00000533682 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
CLP1-205ENST00000533682 CAMSAP1Q5T5Y3 1602 aa16.27■□□□□ 0.2
CLP1-205ENST00000533682 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
CLP1-205ENST00000533682 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
CLP1-205ENST00000533682 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
CLP1-205ENST00000533682 IDI1Q13907 227 aa16.25■□□□□ 0.19
CLP1-205ENST00000533682 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
CLP1-205ENST00000533682 NEURL4Q96JN8 1562 aa16.25■□□□□ 0.19
CLP1-205ENST00000533682 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
CLP1-205ENST00000533682 MYOM2P54296 1465 aa16.24■□□□□ 0.19
CLP1-205ENST00000533682 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
CLP1-205ENST00000533682 SYNMO15061 1565 aa16.23■□□□□ 0.19
CLP1-205ENST00000533682 RALBP1Q15311 655 aa16.23■□□□□ 0.19
CLP1-205ENST00000533682 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
CLP1-205ENST00000533682 TRAK1Q9UPV9 953 aa16.21■□□□□ 0.19
CLP1-205ENST00000533682 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
CLP1-205ENST00000533682 KTN1Q86UP2 1357 aaKnown RBP16.21■□□□□ 0.19
CLP1-205ENST00000533682 MLECQ14165 292 aa16.21■□□□□ 0.19
CLP1-205ENST00000533682 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.18
CLP1-205ENST00000533682 PPLO60437 1756 aa16.21■□□□□ 0.18
CLP1-205ENST00000533682 PARD3Q8TEW0 1356 aa16.2■□□□□ 0.18
CLP1-205ENST00000533682 ZBED9Q6R2W3 1325 aa16.2■□□□□ 0.18
CLP1-205ENST00000533682 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
CLP1-205ENST00000533682 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
CLP1-205ENST00000533682 KIF13AQ9H1H9 1805 aa16.19■□□□□ 0.18
CLP1-205ENST00000533682 C14orf93Q9H972 538 aaKnown RBP16.18■□□□□ 0.18
CLP1-205ENST00000533682 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
CLP1-205ENST00000533682 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
CLP1-205ENST00000533682 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
CLP1-205ENST00000533682 ARHGAP31Q2M1Z3 1444 aa16.17■□□□□ 0.18
CLP1-205ENST00000533682 BRD4O60885 1362 aaPredicted RBP16.17■□□□□ 0.18
CLP1-205ENST00000533682 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
CLP1-205ENST00000533682 NEFLP07196 543 aa16.16■□□□□ 0.18
CLP1-205ENST00000533682 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
CLP1-205ENST00000533682 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
CLP1-205ENST00000533682 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
CLP1-205ENST00000533682 ERVK-7P63135 1459 aa16.14■□□□□ 0.17
CLP1-205ENST00000533682 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.17
CLP1-205ENST00000533682 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
CLP1-205ENST00000533682 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.17
CLP1-205ENST00000533682 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
CLP1-205ENST00000533682 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
CLP1-205ENST00000533682 SLC52A1Q9NWF4 448 aa16.13■□□□□ 0.17
CLP1-205ENST00000533682 MYOM1P52179 1685 aa16.13■□□□□ 0.17
CLP1-205ENST00000533682 NEXMIFQ5QGS0 1516 aa16.13■□□□□ 0.17
CLP1-205ENST00000533682 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
CLP1-205ENST00000533682 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
CLP1-205ENST00000533682 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
CLP1-205ENST00000533682 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
CLP1-205ENST00000533682 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLP1-205ENST00000533682 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
CLP1-205ENST00000533682 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
CLP1-205ENST00000533682 STK26Q9P289 416 aa16.09■□□□□ 0.17
CLP1-205ENST00000533682 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
CLP1-205ENST00000533682 CLTCQ00610 1675 aaKnown RBP16.09■□□□□ 0.17
CLP1-205ENST00000533682 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
CLP1-205ENST00000533682 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
CLP1-205ENST00000533682 SLC12A5Q9H2X9 1139 aa16.07■□□□□ 0.16
CLP1-205ENST00000533682 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
CLP1-205ENST00000533682 MYO3AQ8NEV4 1616 aa16.06■□□□□ 0.16
CLP1-205ENST00000533682 QRICH2Q9H0J4 1663 aa16.05■□□□□ 0.16
CLP1-205ENST00000533682 AGLP35573 1532 aa16.05■□□□□ 0.16
CLP1-205ENST00000533682 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
CLP1-205ENST00000533682 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
CLP1-205ENST00000533682 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
CLP1-205ENST00000533682 ADAMTS8Q9UP79 889 aa16.03■□□□□ 0.16
CLP1-205ENST00000533682 SLC24A1O60721 1099 aa16.02■□□□□ 0.15
CLP1-205ENST00000533682 NUDCQ9Y266 331 aa16.02■□□□□ 0.15
CLP1-205ENST00000533682 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
CLP1-205ENST00000533682 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
CLP1-205ENST00000533682 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
CLP1-205ENST00000533682 ARHGEF40Q8TER5 1519 aa16.01■□□□□ 0.15
CLP1-205ENST00000533682 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
CLP1-205ENST00000533682 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
CLP1-205ENST00000533682 ZFYVE9O95405 1425 aa16■□□□□ 0.15
CLP1-205ENST00000533682 ZMYM3Q14202 1370 aa15.99■□□□□ 0.15
CLP1-205ENST00000533682 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
CLP1-205ENST00000533682 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
CLP1-205ENST00000533682 TNNT2P45379 298 aaPredicted RBP15.98■□□□□ 0.15
CLP1-205ENST00000533682 PRAM1Q96QH2 718 aa15.97■□□□□ 0.15
CLP1-205ENST00000533682 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
CLP1-205ENST00000533682 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
CLP1-205ENST00000533682 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
CLP1-205ENST00000533682 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
CLP1-205ENST00000533682 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
CLP1-205ENST00000533682 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
CLP1-205ENST00000533682 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.14
CLP1-205ENST00000533682 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
CLP1-205ENST00000533682 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
CLP1-205ENST00000533682 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
CLP1-205ENST00000533682 SRPK2P78362 688 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms