RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 KCTD12Q96CX2 325 aaKnown RBP6.35□□□□□ -1.39
ATM-220ENST00000533526 SLC24A3Q9HC58 644 aa6.35□□□□□ -1.39
ATM-220ENST00000533526 DAXXQ9UER7 740 aaPredicted RBP6.35□□□□□ -1.39
ATM-220ENST00000533526 TRIM66O15016 1216 aa6.33□□□□□ -1.4
ATM-220ENST00000533526 CLCN1P35523 988 aa6.33□□□□□ -1.4
ATM-220ENST00000533526 PPP4CP60510 307 aa6.33□□□□□ -1.4
ATM-220ENST00000533526 AMHR2Q16671 573 aa6.33□□□□□ -1.4
ATM-220ENST00000533526 SWT1Q5T5J6 900 aaKnown RBP6.33□□□□□ -1.4
ATM-220ENST00000533526 THSD4Q6ZMP0 1018 aa6.33□□□□□ -1.4
ATM-220ENST00000533526 HCSTQ9UBK5 93 aa6.33□□□□□ -1.4
ATM-220ENST00000533526 TSR3Q9UJK0 312 aaKnown RBP6.33□□□□□ -1.4
ATM-220ENST00000533526 NYAP1Q6ZVC0 841 aa6.32□□□□□ -1.4
ATM-220ENST00000533526 SULF1Q8IWU6 871 aa6.32□□□□□ -1.4
ATM-220ENST00000533526 PHOX2BQ99453 314 aa6.32□□□□□ -1.4
ATM-220ENST00000533526 GPCPD1Q9NPB8 672 aa6.31□□□□□ -1.4
ATM-220ENST00000533526 BCAMP50895 628 aa6.3□□□□□ -1.4
ATM-220ENST00000533526 MDM2Q00987 491 aaPredicted RBP6.3□□□□□ -1.4
ATM-220ENST00000533526 HPS5Q9UPZ3 1129 aa6.3□□□□□ -1.4
ATM-220ENST00000533526 PTPN5P54829 565 aa6.29□□□□□ -1.4
ATM-220ENST00000533526 PDE4DQ08499 809 aa6.29□□□□□ -1.4
ATM-220ENST00000533526 PRR14Q9BWN1 585 aa6.29□□□□□ -1.4
ATM-220ENST00000533526 DDX11L8A8MPP1 907 aa6.28□□□□□ -1.4
ATM-220ENST00000533526 RNF40O75150 1001 aa6.28□□□□□ -1.4
ATM-220ENST00000533526 TTLL12Q14166 644 aaPredicted RBP6.28□□□□□ -1.4
ATM-220ENST00000533526 TMUB1Q9BVT8 246 aa6.28□□□□□ -1.4
ATM-220ENST00000533526 KMT5BQ4FZB7 885 aa6.27□□□□□ -1.41
ATM-220ENST00000533526 NLRP7Q8WX94 980 aa6.27□□□□□ -1.41
ATM-220ENST00000533526 WBP1LQ9NX94 342 aa6.27□□□□□ -1.41
ATM-220ENST00000533526 PRKCSHP14314 528 aaPredicted RBP6.26□□□□□ -1.41
ATM-220ENST00000533526 SSTR3P32745 418 aaPredicted RBP6.26□□□□□ -1.41
ATM-220ENST00000533526 RDH13Q8NBN7 331 aa6.26□□□□□ -1.41
ATM-220ENST00000533526 FAM217BQ9NTX9 383 aaPredicted RBP6.26□□□□□ -1.41
ATM-220ENST00000533526 SLC10A3P09131 477 aa6.25□□□□□ -1.41
ATM-220ENST00000533526 PARP9Q8IXQ6 854 aa6.25□□□□□ -1.41
ATM-220ENST00000533526 CD46P15529 392 aa6.24□□□□□ -1.41
ATM-220ENST00000533526 GIGYF2Q6Y7W6 1299 aaKnown RBP6.24□□□□□ -1.41
ATM-220ENST00000533526 REPIN1Q9BWE0 567 aaKnown RBP6.24□□□□□ -1.41
ATM-220ENST00000533526 ACTN4O43707 911 aaKnown RBP6.23□□□□□ -1.41
ATM-220ENST00000533526 CFHP08603 1231 aa6.23□□□□□ -1.41
ATM-220ENST00000533526 GCGRP47871 477 aa6.23□□□□□ -1.41
ATM-220ENST00000533526 GRIPAP1Q4V328 841 aa6.23□□□□□ -1.41
ATM-220ENST00000533526 DIXDC1Q155Q3 683 aa6.22□□□□□ -1.41
ATM-220ENST00000533526 APLP1P51693 650 aa6.21□□□□□ -1.42
ATM-220ENST00000533526 USP46P62068 366 aa6.21□□□□□ -1.42
ATM-220ENST00000533526 NUTM1Q86Y26 1132 aa6.21□□□□□ -1.42
ATM-220ENST00000533526 KDM4AO75164 1064 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 ATP6V1AP38606 617 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 NEUROD2Q15784 382 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 DDRGK1Q96HY6 314 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 BEGAINQ9BUH8 593 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 KDM4CQ9H3R0 1056 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 PCDHB3Q9Y5E6 796 aa6.2□□□□□ -1.42
ATM-220ENST00000533526 MS4A1P11836 297 aa6.19□□□□□ -1.42
ATM-220ENST00000533526 NR1I2O75469 434 aa6.18□□□□□ -1.42
ATM-220ENST00000533526 RSPH6AQ9H0K4 717 aa6.18□□□□□ -1.42
ATM-220ENST00000533526 IL21Q9HBE4 155 aa6.18□□□□□ -1.42
ATM-220ENST00000533526 GPBP1L1Q9HC44 474 aaPredicted RBP6.18□□□□□ -1.42
ATM-220ENST00000533526 BRPF1P55201 1214 aaPredicted RBP6.17□□□□□ -1.42
ATM-220ENST00000533526 KCNC4Q03721 635 aa6.17□□□□□ -1.42
ATM-220ENST00000533526 FUT2Q10981 343 aa6.17□□□□□ -1.42
ATM-220ENST00000533526 ITGBL1O95965 494 aaPredicted RBP6.16□□□□□ -1.42
ATM-220ENST00000533526 TJAP1Q5JTD0 557 aa6.16□□□□□ -1.42
ATM-220ENST00000533526 MORN1Q5T089 497 aa6.16□□□□□ -1.42
ATM-220ENST00000533526 IFFO2Q5TF58 517 aa6.16□□□□□ -1.42
ATM-220ENST00000533526 SPIRE2Q8WWL2 714 aa6.16□□□□□ -1.42
ATM-220ENST00000533526 MTRQ99707 1265 aa6.16□□□□□ -1.42
ATM-220ENST00000533526 GJA5P36382 358 aa6.15□□□□□ -1.42
ATM-220ENST00000533526 SCUBE3Q8IX30 993 aa6.15□□□□□ -1.42
ATM-220ENST00000533526 TBC1D2Q9BYX2 928 aa6.15□□□□□ -1.42
ATM-220ENST00000533526 SALL2Q9Y467 1007 aaPredicted RBP6.15□□□□□ -1.42
ATM-220ENST00000533526 HOXA2O43364 376 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 ZPR1O75312 459 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 COPS2P61201 443 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 Q3C1V9 767 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 PUS10Q3MIT2 529 aaKnown RBP6.14□□□□□ -1.43
ATM-220ENST00000533526 BLOC1S3Q6QNY0 202 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 FAM117AQ9C073 453 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 PLA2G2EQ9NZK7 142 aa6.14□□□□□ -1.43
ATM-220ENST00000533526 FMNL1O95466 1100 aaPredicted RBP6.12□□□□□ -1.43
ATM-220ENST00000533526 FDX1P10109 184 aa6.12□□□□□ -1.43
ATM-220ENST00000533526 SLC27A5Q9Y2P5 690 aa6.12□□□□□ -1.43
ATM-220ENST00000533526 MOXD2PA6NHM9 499 aa6.11□□□□□ -1.43
ATM-220ENST00000533526 SPTLC1O15269 473 aa6.11□□□□□ -1.43
ATM-220ENST00000533526 TUSC1Q2TAM9 212 aa6.11□□□□□ -1.43
ATM-220ENST00000533526 RIC3Q7Z5B4 369 aa6.11□□□□□ -1.43
ATM-220ENST00000533526 IL27Q8NEV9 243 aa6.11□□□□□ -1.43
ATM-220ENST00000533526 GOPCQ9HD26 462 aa6.11□□□□□ -1.43
ATM-220ENST00000533526 SPDYE5A6NIY4 337 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 GGCXP38435 758 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
ATM-220ENST00000533526 SH3D19Q5HYK7 790 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 MYSM1Q5VVJ2 828 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 RSBN1LQ6PCB5 846 aaPredicted RBP6.1□□□□□ -1.43
ATM-220ENST00000533526 BRICD5Q6PL45 260 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 ZNF516Q92618 1163 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 SPSB2Q99619 263 aa6.1□□□□□ -1.43
ATM-220ENST00000533526 PLEKHG3A1L390 1219 aa6.09□□□□□ -1.43
ATM-220ENST00000533526 ADH1BP00325 375 aa6.09□□□□□ -1.43
ATM-220ENST00000533526 NDUFV2P19404 249 aa6.09□□□□□ -1.43
ATM-220ENST00000533526 THAP11Q96EK4 314 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms