RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 MROH1Q8NDA8 1641 aa19.59■□□□□ 0.73
CAPN1-224ENST00000533129 NEFMP07197 916 aa19.59■□□□□ 0.73
CAPN1-224ENST00000533129 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
CAPN1-224ENST00000533129 RICTORQ6R327 1708 aa19.59■□□□□ 0.73
CAPN1-224ENST00000533129 KIF3BO15066 747 aa19.59■□□□□ 0.73
CAPN1-224ENST00000533129 ABCA6Q8N139 1617 aa19.58■□□□□ 0.72
CAPN1-224ENST00000533129 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.72
CAPN1-224ENST00000533129 WASHC2CQ9Y4E1 1318 aa19.57■□□□□ 0.72
CAPN1-224ENST00000533129 FRMPD1Q5SYB0 1578 aa19.56■□□□□ 0.72
CAPN1-224ENST00000533129 IL27Q8NEV9 243 aa19.56■□□□□ 0.72
CAPN1-224ENST00000533129 ZMYM4Q5VZL5 1548 aa19.56■□□□□ 0.72
CAPN1-224ENST00000533129 PARD3Q8TEW0 1356 aa19.55■□□□□ 0.72
CAPN1-224ENST00000533129 NLRP13Q86W25 1043 aa19.55■□□□□ 0.72
CAPN1-224ENST00000533129 LAS1LQ9Y4W2 734 aaKnown RBP19.55■□□□□ 0.72
CAPN1-224ENST00000533129 INSRP06213 1382 aa19.55■□□□□ 0.72
CAPN1-224ENST00000533129 TRPM2O94759 1503 aa19.54■□□□□ 0.72
CAPN1-224ENST00000533129 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
CAPN1-224ENST00000533129 ANO8Q9HCE9 1232 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-224ENST00000533129 DDRGK1Q96HY6 314 aa19.53■□□□□ 0.72
CAPN1-224ENST00000533129 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
CAPN1-224ENST00000533129 PPRC1Q5VV67 1664 aaKnown RBP19.53■□□□□ 0.72
CAPN1-224ENST00000533129 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
CAPN1-224ENST00000533129 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
CAPN1-224ENST00000533129 PTPRTO14522 1441 aa19.52■□□□□ 0.72
CAPN1-224ENST00000533129 SPHKAPQ2M3C7 1700 aa19.51■□□□□ 0.71
CAPN1-224ENST00000533129 EFCAB6Q5THR3 1501 aa19.5■□□□□ 0.71
CAPN1-224ENST00000533129 BLMP54132 1417 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-224ENST00000533129 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-224ENST00000533129 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
CAPN1-224ENST00000533129 TSPOAP1O95153 1857 aa19.47■□□□□ 0.71
CAPN1-224ENST00000533129 TRPM1Q7Z4N2 1603 aa19.47■□□□□ 0.71
CAPN1-224ENST00000533129 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
CAPN1-224ENST00000533129 CEP152O94986 1710 aa19.45■□□□□ 0.7
CAPN1-224ENST00000533129 PRAG1Q86YV5 1406 aa19.44■□□□□ 0.7
CAPN1-224ENST00000533129 YEATS2Q9ULM3 1422 aa19.44■□□□□ 0.7
CAPN1-224ENST00000533129 CLTCL1P53675 1640 aa19.43■□□□□ 0.7
CAPN1-224ENST00000533129 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
CAPN1-224ENST00000533129 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
CAPN1-224ENST00000533129 RTN4Q9NQC3 1192 aaKnown RBP19.43■□□□□ 0.7
CAPN1-224ENST00000533129 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
CAPN1-224ENST00000533129 LAMC1P11047 1609 aa19.42■□□□□ 0.7
CAPN1-224ENST00000533129 PER1O15534 1290 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-224ENST00000533129 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
CAPN1-224ENST00000533129 CRBNQ96SW2 442 aa19.41■□□□□ 0.7
CAPN1-224ENST00000533129 ABCC3O15438 1527 aa19.41■□□□□ 0.7
CAPN1-224ENST00000533129 GGT6Q6P531 493 aa19.4■□□□□ 0.7
CAPN1-224ENST00000533129 COL17A1Q9UMD9 1497 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-224ENST00000533129 GSE1Q14687 1217 aa19.39■□□□□ 0.7
CAPN1-224ENST00000533129 ZC3H13Q5T200 1668 aaKnown RBP19.38■□□□□ 0.69
CAPN1-224ENST00000533129 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
CAPN1-224ENST00000533129 PLIN1O60240 522 aa19.38■□□□□ 0.69
CAPN1-224ENST00000533129 KDM2BQ8NHM5 1336 aa19.37■□□□□ 0.69
CAPN1-224ENST00000533129 GPRASP1Q5JY77 1395 aa19.37■□□□□ 0.69
CAPN1-224ENST00000533129 STAC3Q96MF2 364 aa19.37■□□□□ 0.69
CAPN1-224ENST00000533129 CAMSAP1Q5T5Y3 1602 aa19.36■□□□□ 0.69
CAPN1-224ENST00000533129 NPATQ14207 1427 aa19.36■□□□□ 0.69
CAPN1-224ENST00000533129 NFKBIBQ15653 356 aa19.36■□□□□ 0.69
CAPN1-224ENST00000533129 CENPQQ7L2Z9 268 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-224ENST00000533129 AGLP35573 1532 aa19.32■□□□□ 0.68
CAPN1-224ENST00000533129 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
CAPN1-224ENST00000533129 KIF1BO60333 1816 aa19.32■□□□□ 0.68
CAPN1-224ENST00000533129 SKAP1Q86WV1 359 aa19.32■□□□□ 0.68
CAPN1-224ENST00000533129 MADDQ8WXG6 1647 aa19.32■□□□□ 0.68
CAPN1-224ENST00000533129 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
CAPN1-224ENST00000533129 FAM161AQ3B820 660 aa19.3■□□□□ 0.68
CAPN1-224ENST00000533129 BRPF3Q9ULD4 1205 aa19.29■□□□□ 0.68
CAPN1-224ENST00000533129 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
CAPN1-224ENST00000533129 DISP3Q9P2K9 1392 aa19.28■□□□□ 0.68
CAPN1-224ENST00000533129 NOS1P29475 1434 aa19.28■□□□□ 0.68
CAPN1-224ENST00000533129 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
CAPN1-224ENST00000533129 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
CAPN1-224ENST00000533129 ADGRB3O60242 1522 aa19.28■□□□□ 0.68
CAPN1-224ENST00000533129 MYOM2P54296 1465 aa19.27■□□□□ 0.68
CAPN1-224ENST00000533129 TESK2Q96S53 571 aa19.27■□□□□ 0.68
CAPN1-224ENST00000533129 C8orf34Q49A92 452 aa19.27■□□□□ 0.67
CAPN1-224ENST00000533129 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-224ENST00000533129 MROH2AA6NES4 1674 aa19.25■□□□□ 0.67
CAPN1-224ENST00000533129 PANK3Q9H999 370 aa19.25■□□□□ 0.67
CAPN1-224ENST00000533129 SIGLEC1Q9BZZ2 1709 aa19.25■□□□□ 0.67
CAPN1-224ENST00000533129 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
CAPN1-224ENST00000533129 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
CAPN1-224ENST00000533129 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
CAPN1-224ENST00000533129 VIRMAQ69YN4 1812 aaKnown RBP19.24■□□□□ 0.67
CAPN1-224ENST00000533129 SLC4A3P48751 1232 aa19.24■□□□□ 0.67
CAPN1-224ENST00000533129 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
CAPN1-224ENST00000533129 KIAA1210Q9ULL0 1709 aa19.23■□□□□ 0.67
CAPN1-224ENST00000533129 DUSP27Q5VZP5 1158 aa19.22■□□□□ 0.67
CAPN1-224ENST00000533129 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-224ENST00000533129 SYNMO15061 1565 aa19.22■□□□□ 0.67
CAPN1-224ENST00000533129 ZNF521Q96K83 1311 aa19.21■□□□□ 0.67
CAPN1-224ENST00000533129 TMF1P82094 1093 aa19.21■□□□□ 0.67
CAPN1-224ENST00000533129 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
CAPN1-224ENST00000533129 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-224ENST00000533129 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
CAPN1-224ENST00000533129 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
CAPN1-224ENST00000533129 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
CAPN1-224ENST00000533129 EIF3AQ14152 1382 aaKnown RBP19.18■□□□□ 0.66
CAPN1-224ENST00000533129 CFAP65Q6ZU64 1925 aaKnown RBP19.18■□□□□ 0.66
CAPN1-224ENST00000533129 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
CAPN1-224ENST00000533129 IQGAP1P46940 1657 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms