RNA–Protein interactions for RNA: ENST00000532836.5

TTC39A-217, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-217ENST00000532836 SRCAPQ6ZRS2 3230 aa19.62■□□□□ 0.73
TTC39A-217ENST00000532836 KANK1Q14678 1352 aa19.62■□□□□ 0.73
TTC39A-217ENST00000532836 CHD2O14647 1828 aaKnown RBP19.61■□□□□ 0.73
TTC39A-217ENST00000532836 HDGFP51858 240 aaKnown RBP19.61■□□□□ 0.73
TTC39A-217ENST00000532836 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
TTC39A-217ENST00000532836 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
TTC39A-217ENST00000532836 SLC52A1Q9NWF4 448 aa19.6■□□□□ 0.73
TTC39A-217ENST00000532836 AFF2P51816 1311 aa19.58■□□□□ 0.73
TTC39A-217ENST00000532836 ATF3P18847 181 aa19.58■□□□□ 0.72
TTC39A-217ENST00000532836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.72
TTC39A-217ENST00000532836 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
TTC39A-217ENST00000532836 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
TTC39A-217ENST00000532836 TBX22Q9Y458 520 aa19.57■□□□□ 0.72
TTC39A-217ENST00000532836 MYOM3Q5VTT5 1437 aa19.57■□□□□ 0.72
TTC39A-217ENST00000532836 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
TTC39A-217ENST00000532836 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
TTC39A-217ENST00000532836 ADGRB3O60242 1522 aa19.56■□□□□ 0.72
TTC39A-217ENST00000532836 NUTM2BA6NNL0 878 aaPredicted RBP19.55■□□□□ 0.72
TTC39A-217ENST00000532836 NUTM2EB1AL46 878 aaPredicted RBP19.55■□□□□ 0.72
TTC39A-217ENST00000532836 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
TTC39A-217ENST00000532836 QTRT2Q9H974 415 aaKnown RBP19.55■□□□□ 0.72
TTC39A-217ENST00000532836 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
TTC39A-217ENST00000532836 LMTK2Q8IWU2 1503 aa19.55■□□□□ 0.72
TTC39A-217ENST00000532836 NOS1P29475 1434 aa19.54■□□□□ 0.72
TTC39A-217ENST00000532836 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.72
TTC39A-217ENST00000532836 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
TTC39A-217ENST00000532836 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.72
TTC39A-217ENST00000532836 DIP2AQ14689 1571 aa19.52■□□□□ 0.71
TTC39A-217ENST00000532836 RGS12O14924 1447 aa19.51■□□□□ 0.71
TTC39A-217ENST00000532836 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
TTC39A-217ENST00000532836 BRINP3Q76B58 766 aa19.51■□□□□ 0.71
TTC39A-217ENST00000532836 NGLY1Q96IV0 654 aa19.51■□□□□ 0.71
TTC39A-217ENST00000532836 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
TTC39A-217ENST00000532836 ZFYVE9O95405 1425 aa19.5■□□□□ 0.71
TTC39A-217ENST00000532836 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
TTC39A-217ENST00000532836 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
TTC39A-217ENST00000532836 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
TTC39A-217ENST00000532836 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.49■□□□□ 0.71
TTC39A-217ENST00000532836 RIMS2Q9UQ26 1411 aa19.46■□□□□ 0.71
TTC39A-217ENST00000532836 C8orf37Q96NL8 207 aa19.46■□□□□ 0.71
TTC39A-217ENST00000532836 CCDC125Q86Z20 511 aa19.45■□□□□ 0.7
TTC39A-217ENST00000532836 DCCP43146 1447 aa19.44■□□□□ 0.7
TTC39A-217ENST00000532836 RPRD2Q5VT52 1461 aaKnown RBP19.43■□□□□ 0.7
TTC39A-217ENST00000532836 ABCC5O15440 1437 aa19.42■□□□□ 0.7
TTC39A-217ENST00000532836 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
TTC39A-217ENST00000532836 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
TTC39A-217ENST00000532836 ASXL1Q8IXJ9 1541 aa19.4■□□□□ 0.7
TTC39A-217ENST00000532836 MYO5BQ9ULV0 1848 aa19.39■□□□□ 0.7
TTC39A-217ENST00000532836 ANKRD30AQ9BXX3 1397 aa19.39■□□□□ 0.69
TTC39A-217ENST00000532836 ADAMTS13Q76LX8 1427 aa19.39■□□□□ 0.69
TTC39A-217ENST00000532836 NHSL1Q5SYE7 1610 aa19.38■□□□□ 0.69
TTC39A-217ENST00000532836 AMOTL2Q9Y2J4 779 aa19.38■□□□□ 0.69
TTC39A-217ENST00000532836 TMEM131LA2VDJ0 1609 aa19.37■□□□□ 0.69
TTC39A-217ENST00000532836 PNPLA6Q8IY17 1366 aa19.37■□□□□ 0.69
TTC39A-217ENST00000532836 TRPC5Q9UL62 973 aaPredicted RBP19.37■□□□□ 0.69
TTC39A-217ENST00000532836 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
TTC39A-217ENST00000532836 GCC2Q8IWJ2 1684 aa19.35■□□□□ 0.69
TTC39A-217ENST00000532836 TRPM2O94759 1503 aa19.35■□□□□ 0.69
TTC39A-217ENST00000532836 DAPK1P53355 1430 aa19.34■□□□□ 0.69
TTC39A-217ENST00000532836 USP21Q9UK80 565 aa19.34■□□□□ 0.69
TTC39A-217ENST00000532836 MST1RQ04912 1400 aa19.34■□□□□ 0.69
TTC39A-217ENST00000532836 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.68
TTC39A-217ENST00000532836 ADAMTS2O95450 1211 aa19.32■□□□□ 0.68
TTC39A-217ENST00000532836 FNBP4Q8N3X1 1017 aaPredicted RBP19.32■□□□□ 0.68
TTC39A-217ENST00000532836 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
TTC39A-217ENST00000532836 PTPN23Q9H3S7 1636 aa19.29■□□□□ 0.68
TTC39A-217ENST00000532836 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
TTC39A-217ENST00000532836 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
TTC39A-217ENST00000532836 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
TTC39A-217ENST00000532836 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
TTC39A-217ENST00000532836 ATRNO75882 1429 aa19.26■□□□□ 0.67
TTC39A-217ENST00000532836 EP400Q96L91 3159 aa19.26■□□□□ 0.67
TTC39A-217ENST00000532836 DDX17Q92841 729 aaKnown RBP19.25■□□□□ 0.67
TTC39A-217ENST00000532836 XRN1Q8IZH2 1706 aaKnown RBP19.23■□□□□ 0.67
TTC39A-217ENST00000532836 ADGRL3Q9HAR2 1447 aa19.22■□□□□ 0.67
TTC39A-217ENST00000532836 UNC13BO14795 1591 aa19.22■□□□□ 0.67
TTC39A-217ENST00000532836 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
TTC39A-217ENST00000532836 LAMC1P11047 1609 aa19.22■□□□□ 0.67
TTC39A-217ENST00000532836 ADGRL2O95490 1459 aa19.21■□□□□ 0.67
TTC39A-217ENST00000532836 BLMP54132 1417 aaPredicted RBP19.2■□□□□ 0.66
TTC39A-217ENST00000532836 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
TTC39A-217ENST00000532836 LRP5O75197 1615 aa19.2■□□□□ 0.66
TTC39A-217ENST00000532836 C1orf167Q5SNV9 1468 aa19.18■□□□□ 0.66
TTC39A-217ENST00000532836 GJD4Q96KN9 370 aaPredicted RBP19.18■□□□□ 0.66
TTC39A-217ENST00000532836 SF3B2Q13435 895 aaKnown RBP19.16■□□□□ 0.66
TTC39A-217ENST00000532836 BCL9LQ86UU0 1499 aa19.16■□□□□ 0.66
TTC39A-217ENST00000532836 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.66
TTC39A-217ENST00000532836 METP08581 1390 aa19.14■□□□□ 0.65
TTC39A-217ENST00000532836 NRXN3Q9Y4C0 1643 aa19.14■□□□□ 0.65
TTC39A-217ENST00000532836 E9PCH4 1651 aa19.12■□□□□ 0.65
TTC39A-217ENST00000532836 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
TTC39A-217ENST00000532836 APLP2Q06481 763 aa19.11■□□□□ 0.65
TTC39A-217ENST00000532836 ORAI2Q96SN7 254 aa19.11■□□□□ 0.65
TTC39A-217ENST00000532836 MYOM2P54296 1465 aa19.1■□□□□ 0.65
TTC39A-217ENST00000532836 DEFB132Q7Z7B7 95 aa19.09■□□□□ 0.65
TTC39A-217ENST00000532836 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
TTC39A-217ENST00000532836 MARF1Q9Y4F3 1742 aaKnown RBP19.08■□□□□ 0.65
TTC39A-217ENST00000532836 NPHP3Q7Z494 1330 aa19.07■□□□□ 0.64
TTC39A-217ENST00000532836 UNC5CLQ8IV45 518 aa19.07■□□□□ 0.64
TTC39A-217ENST00000532836 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms