RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-223ENST00000532678 MAST1Q9Y2H9 1570 aa12.54□□□□□ -0.4
PUM1-223ENST00000532678 RNF17Q9BXT8 1623 aaKnown RBP12.54□□□□□ -0.4
PUM1-223ENST00000532678 TNRQ92752 1358 aa12.54□□□□□ -0.4
PUM1-223ENST00000532678 CEP152O94986 1710 aa12.54□□□□□ -0.4
PUM1-223ENST00000532678 PZPP20742 1482 aa12.53□□□□□ -0.4
PUM1-223ENST00000532678 MROH1Q8NDA8 1641 aa12.52□□□□□ -0.4
PUM1-223ENST00000532678 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
PUM1-223ENST00000532678 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.41
PUM1-223ENST00000532678 CROCC2H7BZ55 1655 aa12.51□□□□□ -0.41
PUM1-223ENST00000532678 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
PUM1-223ENST00000532678 MYOM3Q5VTT5 1437 aa12.51□□□□□ -0.41
PUM1-223ENST00000532678 ABCC3O15438 1527 aa12.51□□□□□ -0.41
PUM1-223ENST00000532678 SPATA31D1Q6ZQQ2 1576 aa12.51□□□□□ -0.41
PUM1-223ENST00000532678 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
PUM1-223ENST00000532678 EIF2AK4Q9P2K8 1649 aaKnown RBP12.5□□□□□ -0.41
PUM1-223ENST00000532678 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
PUM1-223ENST00000532678 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
PUM1-223ENST00000532678 PYGBP11216 843 aa12.49□□□□□ -0.41
PUM1-223ENST00000532678 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
PUM1-223ENST00000532678 CFAP65Q6ZU64 1925 aaKnown RBP12.49□□□□□ -0.41
PUM1-223ENST00000532678 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
PUM1-223ENST00000532678 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
PUM1-223ENST00000532678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.412e-9■■□□□ 13.2
PUM1-223ENST00000532678 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
PUM1-223ENST00000532678 TSPY4P0CV99 314 aa12.47□□□□□ -0.41
PUM1-223ENST00000532678 TSPY10P0CW01 314 aa12.47□□□□□ -0.41
PUM1-223ENST00000532678 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
PUM1-223ENST00000532678 MAP3K13O43283 966 aa12.46□□□□□ -0.41
PUM1-223ENST00000532678 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.41
PUM1-223ENST00000532678 ERVK-7P63135 1459 aa12.46□□□□□ -0.42
PUM1-223ENST00000532678 MIA2Q96PC5 1412 aa12.45□□□□□ -0.42
PUM1-223ENST00000532678 ILDR2Q71H61 639 aa12.45□□□□□ -0.42
PUM1-223ENST00000532678 DUOX2Q9NRD8 1548 aa12.45□□□□□ -0.42
PUM1-223ENST00000532678 NLRP1Q9C000 1473 aa12.45□□□□□ -0.42
PUM1-223ENST00000532678 VWDEQ8N2E2 1590 aa12.44□□□□□ -0.42
PUM1-223ENST00000532678 UBAP1LF5GYI3 381 aa12.44□□□□□ -0.42
PUM1-223ENST00000532678 GABBR2O75899 941 aa12.44□□□□□ -0.42
PUM1-223ENST00000532678 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
PUM1-223ENST00000532678 IQGAP1P46940 1657 aa12.44□□□□□ -0.42
PUM1-223ENST00000532678 ABCC5O15440 1437 aa12.44□□□□□ -0.42
PUM1-223ENST00000532678 PRDM15P57071 1507 aaPredicted RBP12.43□□□□□ -0.42
PUM1-223ENST00000532678 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
PUM1-223ENST00000532678 STRCP1A6NGW2 1772 aa12.43□□□□□ -0.42
PUM1-223ENST00000532678 KIF15Q9NS87 1388 aa12.43□□□□□ -0.42
PUM1-223ENST00000532678 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
PUM1-223ENST00000532678 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
PUM1-223ENST00000532678 DEPDC5O75140 1603 aa12.42□□□□□ -0.42
PUM1-223ENST00000532678 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
PUM1-223ENST00000532678 NPHP4O75161 1426 aaPredicted RBP12.41□□□□□ -0.42
PUM1-223ENST00000532678 DAPK1P53355 1430 aa12.41□□□□□ -0.42
PUM1-223ENST00000532678 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
PUM1-223ENST00000532678 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
PUM1-223ENST00000532678 CPS1P31327 1500 aa12.4□□□□□ -0.42
PUM1-223ENST00000532678 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
PUM1-223ENST00000532678 RRP7BPQ9NSQ0 103 aa12.39□□□□□ -0.43
PUM1-223ENST00000532678 ALKQ9UM73 1620 aa12.39□□□□□ -0.43
PUM1-223ENST00000532678 MED14O60244 1454 aa12.39□□□□□ -0.43
PUM1-223ENST00000532678 ERBINQ96RT1 1412 aa12.38□□□□□ -0.43
PUM1-223ENST00000532678 PIK3C2BO00750 1634 aa12.38□□□□□ -0.43
PUM1-223ENST00000532678 ANKLE2Q86XL3 938 aa12.38□□□□□ -0.43
PUM1-223ENST00000532678 RNF25Q96BH1 459 aaPredicted RBP12.38□□□□□ -0.43
PUM1-223ENST00000532678 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
PUM1-223ENST00000532678 GALR2O43603 387 aaPredicted RBP12.37□□□□□ -0.43
PUM1-223ENST00000532678 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
PUM1-223ENST00000532678 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
PUM1-223ENST00000532678 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
PUM1-223ENST00000532678 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
PUM1-223ENST00000532678 SYNMO15061 1565 aa12.35□□□□□ -0.43
PUM1-223ENST00000532678 RGL2O15211 777 aa12.35□□□□□ -0.43
PUM1-223ENST00000532678 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
PUM1-223ENST00000532678 HSPA1LP34931 641 aa12.33□□□□□ -0.44
PUM1-223ENST00000532678 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
PUM1-223ENST00000532678 ARHGAP31Q2M1Z3 1444 aa12.33□□□□□ -0.44
PUM1-223ENST00000532678 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
PUM1-223ENST00000532678 ARHGAP23Q9P227 1491 aa12.33□□□□□ -0.44
PUM1-223ENST00000532678 XIRP1Q702N8 1843 aaKnown RBP12.32□□□□□ -0.44
PUM1-223ENST00000532678 SLIT1O75093 1534 aa12.32□□□□□ -0.44
PUM1-223ENST00000532678 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
PUM1-223ENST00000532678 TIE1P35590 1138 aa12.32□□□□□ -0.44
PUM1-223ENST00000532678 EFCAB6Q5THR3 1501 aa12.32□□□□□ -0.44
PUM1-223ENST00000532678 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
PUM1-223ENST00000532678 LTKP29376 864 aa12.31□□□□□ -0.44
PUM1-223ENST00000532678 LMTK2Q8IWU2 1503 aa12.31□□□□□ -0.44
PUM1-223ENST00000532678 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
PUM1-223ENST00000532678 ADGRL2O95490 1459 aa12.3□□□□□ -0.44
PUM1-223ENST00000532678 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
PUM1-223ENST00000532678 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
PUM1-223ENST00000532678 MYO5BQ9ULV0 1848 aa12.3□□□□□ -0.44
PUM1-223ENST00000532678 KANK1Q14678 1352 aa12.3□□□□□ -0.44
PUM1-223ENST00000532678 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
PUM1-223ENST00000532678 ADGRB3O60242 1522 aa12.29□□□□□ -0.44
PUM1-223ENST00000532678 SOCS7O14512 581 aa12.28□□□□□ -0.44
PUM1-223ENST00000532678 TOM1O60784 492 aa12.28□□□□□ -0.44
PUM1-223ENST00000532678 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
PUM1-223ENST00000532678 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
PUM1-223ENST00000532678 TMEM2Q9UHN6 1383 aa12.27□□□□□ -0.45
PUM1-223ENST00000532678 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
PUM1-223ENST00000532678 NOS1P29475 1434 aa12.26□□□□□ -0.45
PUM1-223ENST00000532678 TET3O43151 1660 aa12.26□□□□□ -0.45
PUM1-223ENST00000532678 PSEN1P49768 467 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms