RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.35
GRAMD1B-208ENST00000532581 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.35
GRAMD1B-208ENST00000532581 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
GRAMD1B-208ENST00000532581 PLIN1O60240 522 aa17.26■□□□□ 0.35
GRAMD1B-208ENST00000532581 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
GRAMD1B-208ENST00000532581 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
GRAMD1B-208ENST00000532581 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
GRAMD1B-208ENST00000532581 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
GRAMD1B-208ENST00000532581 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
GRAMD1B-208ENST00000532581 TET3O43151 1660 aa17.24■□□□□ 0.35
GRAMD1B-208ENST00000532581 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
GRAMD1B-208ENST00000532581 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
GRAMD1B-208ENST00000532581 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
GRAMD1B-208ENST00000532581 SPAG9O60271 1321 aaKnown RBP17.24■□□□□ 0.35
GRAMD1B-208ENST00000532581 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
GRAMD1B-208ENST00000532581 MYOM1P52179 1685 aa17.23■□□□□ 0.35
GRAMD1B-208ENST00000532581 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
GRAMD1B-208ENST00000532581 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
GRAMD1B-208ENST00000532581 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
GRAMD1B-208ENST00000532581 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
GRAMD1B-208ENST00000532581 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
GRAMD1B-208ENST00000532581 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
GRAMD1B-208ENST00000532581 VWDEQ8N2E2 1590 aa17.2■□□□□ 0.34
GRAMD1B-208ENST00000532581 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
GRAMD1B-208ENST00000532581 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
GRAMD1B-208ENST00000532581 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
GRAMD1B-208ENST00000532581 INO80Q9ULG1 1556 aaPredicted RBP17.18■□□□□ 0.34
GRAMD1B-208ENST00000532581 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
GRAMD1B-208ENST00000532581 KANK1Q14678 1352 aa17.17■□□□□ 0.34
GRAMD1B-208ENST00000532581 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
GRAMD1B-208ENST00000532581 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
GRAMD1B-208ENST00000532581 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
GRAMD1B-208ENST00000532581 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
GRAMD1B-208ENST00000532581 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
GRAMD1B-208ENST00000532581 MYOM2P54296 1465 aa17.16■□□□□ 0.34
GRAMD1B-208ENST00000532581 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
GRAMD1B-208ENST00000532581 MAP3K4Q9Y6R4 1608 aa17.14■□□□□ 0.33
GRAMD1B-208ENST00000532581 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
GRAMD1B-208ENST00000532581 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
GRAMD1B-208ENST00000532581 USP35Q9P2H5 1018 aa17.14■□□□□ 0.33
GRAMD1B-208ENST00000532581 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
GRAMD1B-208ENST00000532581 ABCA6Q8N139 1617 aa17.12■□□□□ 0.33
GRAMD1B-208ENST00000532581 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
GRAMD1B-208ENST00000532581 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
GRAMD1B-208ENST00000532581 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
GRAMD1B-208ENST00000532581 NKTRP30414 1462 aaKnown RBP17.1■□□□□ 0.33
GRAMD1B-208ENST00000532581 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
GRAMD1B-208ENST00000532581 FANCAO15360 1455 aa17.1■□□□□ 0.33
GRAMD1B-208ENST00000532581 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
GRAMD1B-208ENST00000532581 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
GRAMD1B-208ENST00000532581 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
GRAMD1B-208ENST00000532581 KIF1BO60333 1816 aa17.08■□□□□ 0.32
GRAMD1B-208ENST00000532581 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
GRAMD1B-208ENST00000532581 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.32
GRAMD1B-208ENST00000532581 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
GRAMD1B-208ENST00000532581 NEFMP07197 916 aa17.07■□□□□ 0.32
GRAMD1B-208ENST00000532581 CCDC146Q8IYE0 955 aa17.07■□□□□ 0.32
GRAMD1B-208ENST00000532581 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
GRAMD1B-208ENST00000532581 SBNO2Q9Y2G9 1366 aa17.07■□□□□ 0.32
GRAMD1B-208ENST00000532581 KIF3BO15066 747 aa17.06■□□□□ 0.32
GRAMD1B-208ENST00000532581 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
GRAMD1B-208ENST00000532581 E9PSI1 815 aa17.06■□□□□ 0.32
GRAMD1B-208ENST00000532581 APAF1O14727 1248 aa17.05■□□□□ 0.32
GRAMD1B-208ENST00000532581 FAM161AQ3B820 660 aa17.05■□□□□ 0.32
GRAMD1B-208ENST00000532581 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
GRAMD1B-208ENST00000532581 ADGRL1O94910 1474 aa17.05■□□□□ 0.32
GRAMD1B-208ENST00000532581 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
GRAMD1B-208ENST00000532581 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 LMTK2Q8IWU2 1503 aa17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 POLR3AO14802 1390 aaPredicted RBP17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
GRAMD1B-208ENST00000532581 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.32
GRAMD1B-208ENST00000532581 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.31
GRAMD1B-208ENST00000532581 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
GRAMD1B-208ENST00000532581 BCAR3O75815 825 aa16.99■□□□□ 0.31
GRAMD1B-208ENST00000532581 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
GRAMD1B-208ENST00000532581 ZC3H13Q5T200 1668 aaKnown RBP16.98■□□□□ 0.31
GRAMD1B-208ENST00000532581 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
GRAMD1B-208ENST00000532581 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
GRAMD1B-208ENST00000532581 CENPJQ9HC77 1338 aaPredicted RBP16.97■□□□□ 0.31
GRAMD1B-208ENST00000532581 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
GRAMD1B-208ENST00000532581 NOS1P29475 1434 aa16.96■□□□□ 0.31
GRAMD1B-208ENST00000532581 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
GRAMD1B-208ENST00000532581 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
GRAMD1B-208ENST00000532581 USP32Q8NFA0 1604 aa16.95■□□□□ 0.3
GRAMD1B-208ENST00000532581 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
GRAMD1B-208ENST00000532581 RGS3P49796 1198 aa16.95■□□□□ 0.3
GRAMD1B-208ENST00000532581 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
GRAMD1B-208ENST00000532581 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
GRAMD1B-208ENST00000532581 ZNF518AQ6AHZ1 1483 aa16.94■□□□□ 0.3
GRAMD1B-208ENST00000532581 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
GRAMD1B-208ENST00000532581 PPLO60437 1756 aa16.94■□□□□ 0.3
GRAMD1B-208ENST00000532581 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
GRAMD1B-208ENST00000532581 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
GRAMD1B-208ENST00000532581 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
GRAMD1B-208ENST00000532581 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
GRAMD1B-208ENST00000532581 NFKBIBQ15653 356 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms