RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
SRPRA-206ENST00000532259 IQGAP1P46940 1657 aa20.79■□□□□ 0.92
SRPRA-206ENST00000532259 STAC3Q96MF2 364 aa20.79■□□□□ 0.92
SRPRA-206ENST00000532259 FBXO31Q5XUX0 539 aaPredicted RBP20.78■□□□□ 0.92
SRPRA-206ENST00000532259 SCAF11Q99590 1463 aaKnown RBP20.77■□□□□ 0.92
SRPRA-206ENST00000532259 ZMYM4Q5VZL5 1548 aa20.77■□□□□ 0.92
SRPRA-206ENST00000532259 SYNMO15061 1565 aa20.77■□□□□ 0.92
SRPRA-206ENST00000532259 NEURL4Q96JN8 1562 aa20.77■□□□□ 0.92
SRPRA-206ENST00000532259 IFT172Q9UG01 1749 aa20.77■□□□□ 0.91
SRPRA-206ENST00000532259 PER1O15534 1290 aaPredicted RBP20.77■□□□□ 0.91
SRPRA-206ENST00000532259 IDI1Q13907 227 aa20.77■□□□□ 0.91
SRPRA-206ENST00000532259 MLECQ14165 292 aa20.77■□□□□ 0.91
SRPRA-206ENST00000532259 PANK3Q9H999 370 aa20.77■□□□□ 0.91
SRPRA-206ENST00000532259 MYOM2P54296 1465 aa20.76■□□□□ 0.91
SRPRA-206ENST00000532259 BCANQ96GW7 911 aa20.75■□□□□ 0.91
SRPRA-206ENST00000532259 TMEM132EQ6IEE7 984 aa20.74■□□□□ 0.91
SRPRA-206ENST00000532259 CC2D1BQ5T0F9 858 aaKnown RBP20.72■□□□□ 0.91
SRPRA-206ENST00000532259 FKBP8Q14318 412 aa20.72■□□□□ 0.91
SRPRA-206ENST00000532259 NRXN1Q9ULB1 1477 aa20.72■□□□□ 0.91
SRPRA-206ENST00000532259 TMC1Q8TDI8 760 aa20.71■□□□□ 0.91
SRPRA-206ENST00000532259 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
SRPRA-206ENST00000532259 PPLO60437 1756 aa20.7■□□□□ 0.9
SRPRA-206ENST00000532259 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
SRPRA-206ENST00000532259 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
SRPRA-206ENST00000532259 PIK3C2BO00750 1634 aa20.69■□□□□ 0.9
SRPRA-206ENST00000532259 PIK3C2GO75747 1445 aa20.68■□□□□ 0.9
SRPRA-206ENST00000532259 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
SRPRA-206ENST00000532259 ZC3H13Q5T200 1668 aaKnown RBP20.67■□□□□ 0.9
SRPRA-206ENST00000532259 C14orf93Q9H972 538 aaKnown RBP20.67■□□□□ 0.9
SRPRA-206ENST00000532259 MYBBP1AQ9BQG0 1328 aaKnown RBP20.66■□□□□ 0.9
SRPRA-206ENST00000532259 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
SRPRA-206ENST00000532259 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
SRPRA-206ENST00000532259 RALBP1Q15311 655 aa20.65■□□□□ 0.9
SRPRA-206ENST00000532259 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
SRPRA-206ENST00000532259 PREX1Q8TCU6 1659 aa20.64■□□□□ 0.89
SRPRA-206ENST00000532259 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
SRPRA-206ENST00000532259 MYO5BQ9ULV0 1848 aa20.63■□□□□ 0.89
SRPRA-206ENST00000532259 RPGRIP1LQ68CZ1 1315 aa20.63■□□□□ 0.89
SRPRA-206ENST00000532259 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
SRPRA-206ENST00000532259 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
SRPRA-206ENST00000532259 IRX6P78412 446 aaPredicted RBP20.62■□□□□ 0.89
SRPRA-206ENST00000532259 NEFLP07196 543 aa20.61■□□□□ 0.89
SRPRA-206ENST00000532259 ERVK-7P63135 1459 aa20.61■□□□□ 0.89
SRPRA-206ENST00000532259 ADGRB1O14514 1584 aa20.61■□□□□ 0.89
SRPRA-206ENST00000532259 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
SRPRA-206ENST00000532259 CLTCQ00610 1675 aaKnown RBP20.6■□□□□ 0.89
SRPRA-206ENST00000532259 AGLP35573 1532 aa20.59■□□□□ 0.89
SRPRA-206ENST00000532259 CENPJQ9HC77 1338 aaPredicted RBP20.58■□□□□ 0.89
SRPRA-206ENST00000532259 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.88
SRPRA-206ENST00000532259 REREQ9P2R6 1566 aa20.58■□□□□ 0.88
SRPRA-206ENST00000532259 CDCA8Q53HL2 280 aa20.58■□□□□ 0.88
SRPRA-206ENST00000532259 BRD4O60885 1362 aaPredicted RBP20.57■□□□□ 0.88
SRPRA-206ENST00000532259 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
SRPRA-206ENST00000532259 MYOM1P52179 1685 aa20.57■□□□□ 0.88
SRPRA-206ENST00000532259 ARHGEF40Q8TER5 1519 aa20.57■□□□□ 0.88
SRPRA-206ENST00000532259 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
SRPRA-206ENST00000532259 NLRP13Q86W25 1043 aa20.56■□□□□ 0.88
SRPRA-206ENST00000532259 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
SRPRA-206ENST00000532259 STK26Q9P289 416 aa20.56■□□□□ 0.88
SRPRA-206ENST00000532259 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
SRPRA-206ENST00000532259 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
SRPRA-206ENST00000532259 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
SRPRA-206ENST00000532259 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
SRPRA-206ENST00000532259 KDM5AP29375 1690 aaKnown RBP20.52■□□□□ 0.88
SRPRA-206ENST00000532259 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
SRPRA-206ENST00000532259 LRPPRCP42704 1394 aaKnown RBP20.52■□□□□ 0.87
SRPRA-206ENST00000532259 MYO3AQ8NEV4 1616 aa20.5■□□□□ 0.87
SRPRA-206ENST00000532259 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
SRPRA-206ENST00000532259 QRICH2Q9H0J4 1663 aa20.49■□□□□ 0.87
SRPRA-206ENST00000532259 SLC12A5Q9H2X9 1139 aa20.49■□□□□ 0.87
SRPRA-206ENST00000532259 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
SRPRA-206ENST00000532259 ZMYM3Q14202 1370 aa20.48■□□□□ 0.87
SRPRA-206ENST00000532259 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
SRPRA-206ENST00000532259 ESF1Q9H501 851 aaKnown RBP20.48■□□□□ 0.87
SRPRA-206ENST00000532259 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
SRPRA-206ENST00000532259 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
SRPRA-206ENST00000532259 SPATA31D1Q6ZQQ2 1576 aa20.45■□□□□ 0.86
SRPRA-206ENST00000532259 A2ML1A8K2U0 1454 aa20.44■□□□□ 0.86
SRPRA-206ENST00000532259 ARHGEF28Q8N1W1 1705 aaKnown RBP20.44■□□□□ 0.86
SRPRA-206ENST00000532259 CABP2Q9NPB3 220 aa20.44■□□□□ 0.86
SRPRA-206ENST00000532259 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
SRPRA-206ENST00000532259 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
SRPRA-206ENST00000532259 CEBPAP49715 358 aaPredicted RBP20.42■□□□□ 0.86
SRPRA-206ENST00000532259 PRAM1Q96QH2 718 aa20.41■□□□□ 0.86
SRPRA-206ENST00000532259 TULP4Q9NRJ4 1543 aa20.4■□□□□ 0.86
SRPRA-206ENST00000532259 MINK1Q8N4C8 1332 aaPredicted RBP20.4■□□□□ 0.86
SRPRA-206ENST00000532259 RIMS2Q9UQ26 1411 aa20.39■□□□□ 0.85
SRPRA-206ENST00000532259 ALKQ9UM73 1620 aa20.39■□□□□ 0.85
SRPRA-206ENST00000532259 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
SRPRA-206ENST00000532259 YTHDC2Q9H6S0 1430 aaKnown RBP20.38■□□□□ 0.85
SRPRA-206ENST00000532259 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
SRPRA-206ENST00000532259 EVC2Q86UK5 1308 aa20.37■□□□□ 0.85
SRPRA-206ENST00000532259 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
SRPRA-206ENST00000532259 PTPRMP28827 1452 aa20.37■□□□□ 0.85
SRPRA-206ENST00000532259 POGKQ9P215 609 aa20.36■□□□□ 0.85
SRPRA-206ENST00000532259 NUDCQ9Y266 331 aa20.35■□□□□ 0.85
SRPRA-206ENST00000532259 WAPLQ7Z5K2 1190 aa20.35■□□□□ 0.85
SRPRA-206ENST00000532259 SRPK2P78362 688 aaKnown RBP20.34■□□□□ 0.85
SRPRA-206ENST00000532259 SMG6Q86US8 1419 aaKnown RBP20.34■□□□□ 0.85
SRPRA-206ENST00000532259 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms