RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 NOP9Q86U38 636 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-222ENST00000531967 TBC1D2BQ9UPU7 963 aa7.23□□□□□ -1.25
ECHDC1-222ENST00000531967 ATG7O95352 703 aa7.23□□□□□ -1.25
ECHDC1-222ENST00000531967 TMEM259Q4ZIN3 620 aa7.23□□□□□ -1.25
ECHDC1-222ENST00000531967 SBNO2Q9Y2G9 1366 aa7.23□□□□□ -1.25
ECHDC1-222ENST00000531967 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.22□□□□□ -1.25
ECHDC1-222ENST00000531967 GPATCH3Q96I76 525 aa7.22□□□□□ -1.25
ECHDC1-222ENST00000531967 METTL14Q9HCE5 456 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-222ENST00000531967 PRDM10Q9NQV6 1147 aa7.22□□□□□ -1.25
ECHDC1-222ENST00000531967 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-222ENST00000531967 FCHSD2O94868 740 aa7.21□□□□□ -1.25
ECHDC1-222ENST00000531967 RECKO95980 971 aa7.21□□□□□ -1.25
ECHDC1-222ENST00000531967 FBXO31Q5XUX0 539 aaPredicted RBP7.21□□□□□ -1.25
ECHDC1-222ENST00000531967 BEGAINQ9BUH8 593 aa7.21□□□□□ -1.25
ECHDC1-222ENST00000531967 SOX12O15370 315 aa7.21□□□□□ -1.26
ECHDC1-222ENST00000531967 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
ECHDC1-222ENST00000531967 MYSM1Q5VVJ2 828 aa7.21□□□□□ -1.26
ECHDC1-222ENST00000531967 PRM3Q9NNZ6 103 aa7.21□□□□□ -1.26
ECHDC1-222ENST00000531967 KLHL42Q9P2K6 505 aa7.21□□□□□ -1.26
ECHDC1-222ENST00000531967 LMOD1P29536 600 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 CLCN1P35523 988 aa7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 NPAS4Q8IUM7 802 aa7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 NAP1L5Q96NT1 182 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 CLK2P49760 499 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 MCCD1P59942 119 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-222ENST00000531967 PALM3A6NDB9 673 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 PSEN1P49768 467 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 SPTY2D1Q68D10 685 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 LARGE2Q8N3Y3 721 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 EMILIN3Q9NT22 766 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 GPCPD1Q9NPB8 672 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 PCDHB8Q9UN66 801 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 PCDHB13Q9Y5F0 798 aa7.19□□□□□ -1.26
ECHDC1-222ENST00000531967 PTMSP20962 102 aa7.18□□□□□ -1.26
ECHDC1-222ENST00000531967 GRXCR2A6NFK2 248 aa7.18□□□□□ -1.26
ECHDC1-222ENST00000531967 PEX14O75381 377 aa7.18□□□□□ -1.26
ECHDC1-222ENST00000531967 MARSP56192 900 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-222ENST00000531967 DNAJC2Q99543 621 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-222ENST00000531967 LNPKQ9C0E8 428 aa7.18□□□□□ -1.26
ECHDC1-222ENST00000531967 TLDC2A0PJX2 215 aa7.17□□□□□ -1.26
ECHDC1-222ENST00000531967 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-222ENST00000531967 ERCC5P28715 1186 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-222ENST00000531967 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
ECHDC1-222ENST00000531967 VTI1AQ96AJ9 217 aa7.17□□□□□ -1.26
ECHDC1-222ENST00000531967 SOCS7O14512 581 aa7.17□□□□□ -1.26
ECHDC1-222ENST00000531967 ANKRD33BA6NCL7 494 aa7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 IGBP1P78318 339 aa7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 MDM2Q00987 491 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 FAM50AQ14320 339 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 PHLDB3Q6NSJ2 640 aa7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 APBB1IPQ7Z5R6 666 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 EGFLAMQ63HQ2 1017 aa7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 PPP2R2DQ66LE6 453 aa7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 MAGEC2Q9UBF1 373 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 LAS1LQ9Y4W2 734 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-222ENST00000531967 hCG_2014768A0A024R1R8 64 aa7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 PARNO95453 639 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 C7P10643 843 aa7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 ZEB1P37275 1124 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 RALBP1Q15311 655 aa7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 CREBZFQ9NS37 354 aa7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 SOWAHDA6NJG2 315 aa7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 PTPROQ16827 1216 aa7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 CUEDC1Q9NWM3 386 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-222ENST00000531967 TSNAXIP1Q2TAA8 658 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 SDE2Q6IQ49 451 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 TANGO6Q9C0B7 1094 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 TERF2IPQ9NYB0 399 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 TFIP11Q9UBB9 837 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 OSBPP22059 807 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 PSME1Q06323 249 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 SMC5Q8IY18 1101 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 TMTC2Q8N394 836 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 GPATCH11Q8N954 259 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 KCNB2Q92953 911 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 SPACA7Q96KW9 195 aa7.14□□□□□ -1.27
ECHDC1-222ENST00000531967 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-222ENST00000531967 TAGLNQ01995 201 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-222ENST00000531967 CCDC194A0A1B0GVG4 234 aa7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 UBA5Q9GZZ9 404 aa7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 CABP2Q9NPB3 220 aa7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 FOXD4L6Q3SYB3 417 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 FOXD4L3Q6VB84 417 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 PIK3R5Q8WYR1 880 aa7.12□□□□□ -1.27
ECHDC1-222ENST00000531967 CCDC144BQ3MJ40 725 aa7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 MS4A4AQ96JQ5 239 aa7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 HMGB1P1B2RPK0 211 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 PTGDRQ13258 359 aa7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 WASHC4Q2M389 1173 aa7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 TBX22Q9Y458 520 aa7.11□□□□□ -1.27
ECHDC1-222ENST00000531967 TMEM164Q5U3C3 297 aa7.1□□□□□ -1.27
ECHDC1-222ENST00000531967 PHOX2BQ99453 314 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms