RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CREBRFQ8IUR6 639 aa8.96□□□□□ -0.97
CTNND1-229ENST00000531014 KIF3AQ9Y496 699 aa8.96□□□□□ -0.97
CTNND1-229ENST00000531014 ARAP1Q96P48 1450 aa8.96□□□□□ -0.98
CTNND1-229ENST00000531014 WASHC2AQ641Q2 1341 aa8.96□□□□□ -0.98
CTNND1-229ENST00000531014 RASSF8Q8NHQ8 419 aa8.96□□□□□ -0.98
CTNND1-229ENST00000531014 MSH6P52701 1360 aa8.96□□□□□ -0.98
CTNND1-229ENST00000531014 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-229ENST00000531014 ABCC10Q5T3U5 1492 aa8.95□□□□□ -0.98
CTNND1-229ENST00000531014 DYDC1Q8WWB3 177 aa8.95□□□□□ -0.98
CTNND1-229ENST00000531014 FAM135AQ9P2D6 1515 aa8.95□□□□□ -0.98
CTNND1-229ENST00000531014 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-229ENST00000531014 NUDCQ9Y266 331 aa8.94□□□□□ -0.98
CTNND1-229ENST00000531014 EFCAB5A4FU69 1503 aa8.94□□□□□ -0.98
CTNND1-229ENST00000531014 IPO7O95373 1038 aaKnown RBP8.94□□□□□ -0.98
CTNND1-229ENST00000531014 NGDNQ8NEJ9 315 aaKnown RBP8.94□□□□□ -0.98
CTNND1-229ENST00000531014 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
CTNND1-229ENST00000531014 CEP170Q5SW79 1584 aa8.94□□□□□ -0.98
CTNND1-229ENST00000531014 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
CTNND1-229ENST00000531014 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
CTNND1-229ENST00000531014 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
CTNND1-229ENST00000531014 LRPPRCP42704 1394 aaKnown RBP8.93□□□□□ -0.98
CTNND1-229ENST00000531014 TCERG1O14776 1098 aaKnown RBP8.93□□□□□ -0.98
CTNND1-229ENST00000531014 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
CTNND1-229ENST00000531014 SLC52A1Q9NWF4 448 aa8.93□□□□□ -0.98
CTNND1-229ENST00000531014 NEUROD2Q15784 382 aa8.93□□□□□ -0.98
CTNND1-229ENST00000531014 ZNF772Q68DY9 489 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-229ENST00000531014 CADPS2Q86UW7 1296 aa8.93□□□□□ -0.98
CTNND1-229ENST00000531014 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
CTNND1-229ENST00000531014 PES1O00541 588 aaKnown RBP8.92□□□□□ -0.98
CTNND1-229ENST00000531014 TPM2P07951 284 aa8.92□□□□□ -0.98
CTNND1-229ENST00000531014 TPD52L1Q16890 204 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-229ENST00000531014 ZRSR2Q15696 482 aaKnown RBP8.92□□□□□ -0.98
CTNND1-229ENST00000531014 NEO1Q92859 1461 aa8.92□□□□□ -0.98
CTNND1-229ENST00000531014 ARHGAP35Q9NRY4 1499 aa8.92□□□□□ -0.98
CTNND1-229ENST00000531014 IPO9Q96P70 1041 aaKnown RBP8.92□□□□□ -0.98
CTNND1-229ENST00000531014 HSPA2P54652 639 aa8.92□□□□□ -0.98
CTNND1-229ENST00000531014 INCENPQ9NQS7 918 aa8.92□□□□□ -0.98
CTNND1-229ENST00000531014 BECN2A8MW95 431 aa8.91□□□□□ -0.98
CTNND1-229ENST00000531014 NBPF8Q3BBV2 869 aa8.91□□□□□ -0.98
CTNND1-229ENST00000531014 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
CTNND1-229ENST00000531014 TAF3Q5VWG9 929 aa8.91□□□□□ -0.98
CTNND1-229ENST00000531014 TSPYL1Q9H0U9 437 aa8.91□□□□□ -0.98
CTNND1-229ENST00000531014 USP8P40818 1118 aa8.9□□□□□ -0.98
CTNND1-229ENST00000531014 SKOR2Q2VWA4 1001 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-229ENST00000531014 EIF3AQ14152 1382 aaKnown RBP8.9□□□□□ -0.98
CTNND1-229ENST00000531014 KRI1Q8N9T8 703 aaKnown RBP8.9□□□□□ -0.98
CTNND1-229ENST00000531014 C9orf84Q5VXU9 1444 aa8.9□□□□□ -0.99
CTNND1-229ENST00000531014 GPRASP1Q5JY77 1395 aa8.9□□□□□ -0.99
CTNND1-229ENST00000531014 GSE1Q14687 1217 aa8.9□□□□□ -0.99
CTNND1-229ENST00000531014 SF3A1Q15459 793 aaKnown RBP8.9□□□□□ -0.99
CTNND1-229ENST00000531014 HOMER1Q86YM7 354 aa8.9□□□□□ -0.99
CTNND1-229ENST00000531014 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.99
CTNND1-229ENST00000531014 TNRQ92752 1358 aa8.89□□□□□ -0.99
CTNND1-229ENST00000531014 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
CTNND1-229ENST00000531014 MNS1Q8NEH6 495 aa8.89□□□□□ -0.99
CTNND1-229ENST00000531014 ERCC4Q92889 916 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-229ENST00000531014 TROQ12816 1431 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-229ENST00000531014 MSH5O43196 834 aa8.89□□□□□ -0.99
CTNND1-229ENST00000531014 FAM43AQ8N2R8 423 aa8.89□□□□□ -0.99
CTNND1-229ENST00000531014 HECW1Q76N89 1606 aa8.89□□□□□ -0.99
CTNND1-229ENST00000531014 GOLGA6L7A0A1B0GV03 622 aa8.88□□□□□ -0.99
CTNND1-229ENST00000531014 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
CTNND1-229ENST00000531014 LEKR1Q6ZMV7 388 aa8.88□□□□□ -0.99
CTNND1-229ENST00000531014 SRPK2P78362 688 aaKnown RBP8.88□□□□□ -0.99
CTNND1-229ENST00000531014 HIRIP3Q9BW71 556 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-229ENST00000531014 KIF16BQ96L93 1317 aa8.88□□□□□ -0.99
CTNND1-229ENST00000531014 DEF6Q9H4E7 631 aa8.88□□□□□ -0.99
CTNND1-229ENST00000531014 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 ZNF518AQ6AHZ1 1483 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 KLHL34Q8N239 644 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 DIAPH3Q9NSV4 1193 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 PDE3BQ13370 1112 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 CHD1O14646 1710 aa8.87□□□□□ -0.99
CTNND1-229ENST00000531014 HDGFL2Q7Z4V5 671 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-229ENST00000531014 EPRSP07814 1512 aaKnown RBP8.86□□□□□ -0.99
CTNND1-229ENST00000531014 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
CTNND1-229ENST00000531014 ANO8Q9HCE9 1232 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-229ENST00000531014 DDX49Q9Y6V7 483 aaKnown RBP8.86□□□□□ -0.99
CTNND1-229ENST00000531014 C11orf95C9JLR9 678 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-229ENST00000531014 UHRF1BP1LA0JNW5 1464 aa8.86□□□□□ -0.99
CTNND1-229ENST00000531014 ATP10AO60312 1499 aa8.86□□□□□ -0.99
CTNND1-229ENST00000531014 PTPRKQ15262 1439 aa8.86□□□□□ -0.99
CTNND1-229ENST00000531014 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
CTNND1-229ENST00000531014 RWDD1Q9H446 243 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-229ENST00000531014 ATP6V1DQ9Y5K8 247 aa8.86□□□□□ -0.99
CTNND1-229ENST00000531014 MARCH6O60337 910 aa8.85□□□□□ -0.99
CTNND1-229ENST00000531014 STK26Q9P289 416 aa8.85□□□□□ -0.99
CTNND1-229ENST00000531014 KIAA0754O94854 1291 aa8.85□□□□□ -0.99
CTNND1-229ENST00000531014 MYOM3Q5VTT5 1437 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 MAGI2Q86UL8 1455 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 KIF14Q15058 1648 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 ST18O60284 1047 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 CCDC173Q0VFZ6 552 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 IPO8O15397 1037 aaKnown RBP8.84□□□□□ -0.99
CTNND1-229ENST00000531014 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
CTNND1-229ENST00000531014 PBRM1Q86U86 1689 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 NUP155O75694 1391 aa8.84□□□□□ -0.99
CTNND1-229ENST00000531014 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-229ENST00000531014 CHMP4CQ96CF2 233 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms