RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
CSDE1-214ENST00000530886 CAMSAP2Q08AD1 1489 aa10.35□□□□□ -0.75
CSDE1-214ENST00000530886 PLEKHH1Q9ULM0 1364 aa10.35□□□□□ -0.75
CSDE1-214ENST00000530886 NAP1L2Q9ULW6 460 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-214ENST00000530886 MAPK8IP3Q9UPT6 1336 aa10.34□□□□□ -0.75
CSDE1-214ENST00000530886 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
CSDE1-214ENST00000530886 GTPBP4Q9BZE4 634 aaKnown RBP10.34□□□□□ -0.75
CSDE1-214ENST00000530886 GPRASP1Q5JY77 1395 aa10.34□□□□□ -0.75
CSDE1-214ENST00000530886 IBTKQ9P2D0 1353 aaPredicted RBP10.34□□□□□ -0.75
CSDE1-214ENST00000530886 SEC24BO95487 1268 aa10.34□□□□□ -0.75
CSDE1-214ENST00000530886 ZSCAN20P17040 1043 aaPredicted RBP10.34□□□□□ -0.75
CSDE1-214ENST00000530886 ZNF326Q5BKZ1 582 aaKnown RBP10.34□□□□□ -0.75
CSDE1-214ENST00000530886 CHMP5Q9NZZ3 219 aa10.34□□□□□ -0.75
CSDE1-214ENST00000530886 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 IQGAP2Q13576 1575 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 ZNF500O60304 480 aaPredicted RBP10.33□□□□□ -0.76
CSDE1-214ENST00000530886 PTMSP20962 102 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 DUSP27Q5VZP5 1158 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 NLRP13Q86W25 1043 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 TBC1D32Q96NH3 1257 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 SLKQ9H2G2 1235 aaPredicted RBP10.33□□□□□ -0.76
CSDE1-214ENST00000530886 IQGAP1P46940 1657 aa10.33□□□□□ -0.76
CSDE1-214ENST00000530886 CCDC94Q9BW85 323 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-214ENST00000530886 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
CSDE1-214ENST00000530886 CNGB1Q14028 1251 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-214ENST00000530886 URB2Q14146 1524 aaKnown RBP10.32□□□□□ -0.76
CSDE1-214ENST00000530886 TAF3Q5VWG9 929 aa10.31□□□□□ -0.76
CSDE1-214ENST00000530886 ARHGAP31Q2M1Z3 1444 aa10.31□□□□□ -0.76
CSDE1-214ENST00000530886 LETM1O95202 739 aaPredicted RBP10.31□□□□□ -0.76
CSDE1-214ENST00000530886 RSPH4AQ5TD94 716 aa10.31□□□□□ -0.76
CSDE1-214ENST00000530886 DDIT3P35638 169 aa10.3□□□□□ -0.76
CSDE1-214ENST00000530886 SKOR2Q2VWA4 1001 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-214ENST00000530886 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-214ENST00000530886 NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
CSDE1-214ENST00000530886 PPP4R3BQ5MIZ7 849 aa10.3□□□□□ -0.76
CSDE1-214ENST00000530886 PRAG1Q86YV5 1406 aa10.3□□□□□ -0.76
CSDE1-214ENST00000530886 SHPRHQ149N8 1683 aa10.29□□□□□ -0.76
CSDE1-214ENST00000530886 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-214ENST00000530886 RAPGEF6Q8TEU7 1601 aa10.29□□□□□ -0.76
CSDE1-214ENST00000530886 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-214ENST00000530886 WDR7Q9Y4E6 1490 aa10.29□□□□□ -0.76
CSDE1-214ENST00000530886 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-214ENST00000530886 TMEM51Q9NW97 253 aa10.29□□□□□ -0.76
CSDE1-214ENST00000530886 FAM13BQ9NYF5 915 aa10.29□□□□□ -0.76
CSDE1-214ENST00000530886 SHANK2Q9UPX8 1470 aa10.29□□□□□ -0.76
CSDE1-214ENST00000530886 ZHX1Q9UKY1 873 aaPredicted RBP10.28□□□□□ -0.76
CSDE1-214ENST00000530886 KIAA0556O60303 1618 aa10.28□□□□□ -0.76
CSDE1-214ENST00000530886 ADAMTS12P58397 1594 aa10.28□□□□□ -0.76
CSDE1-214ENST00000530886 MCM5P33992 734 aa10.28□□□□□ -0.76
CSDE1-214ENST00000530886 TNNT2P45379 298 aaPredicted RBP10.28□□□□□ -0.76
CSDE1-214ENST00000530886 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
CSDE1-214ENST00000530886 GZF1Q9H116 711 aaPredicted RBP10.28□□□□□ -0.76
CSDE1-214ENST00000530886 NINLQ9Y2I6 1382 aa10.28□□□□□ -0.76
CSDE1-214ENST00000530886 MSNP26038 577 aaKnown RBP10.28□□□□□ -0.76
CSDE1-214ENST00000530886 NOL7Q9UMY1 257 aaKnown RBP10.28□□□□□ -0.76
CSDE1-214ENST00000530886 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.76
CSDE1-214ENST00000530886 MAGI2Q86UL8 1455 aa10.27□□□□□ -0.76
CSDE1-214ENST00000530886 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
CSDE1-214ENST00000530886 IGHDP01880 384 aa10.27□□□□□ -0.77
CSDE1-214ENST00000530886 UQCRHP07919 91 aa10.27□□□□□ -0.77
CSDE1-214ENST00000530886 GAS2L3Q86XJ1 694 aa10.27□□□□□ -0.77
CSDE1-214ENST00000530886 SYNMO15061 1565 aa10.27□□□□□ -0.77
CSDE1-214ENST00000530886 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
CSDE1-214ENST00000530886 DISP1Q96F81 1524 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 FAM135AQ9P2D6 1515 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 SYNJ2O15056 1496 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
CSDE1-214ENST00000530886 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
CSDE1-214ENST00000530886 TESK2Q96S53 571 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 DISP3Q9P2K9 1392 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 UNC13BO14795 1591 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 ARXQ96QS3 562 aa10.26□□□□□ -0.77
CSDE1-214ENST00000530886 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
CSDE1-214ENST00000530886 GPATCH8Q9UKJ3 1502 aaKnown RBP10.25□□□□□ -0.77
CSDE1-214ENST00000530886 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
CSDE1-214ENST00000530886 CEP152O94986 1710 aa10.25□□□□□ -0.77
CSDE1-214ENST00000530886 EIF2AK4Q9P2K8 1649 aaKnown RBP10.25□□□□□ -0.77
CSDE1-214ENST00000530886 PDLIM2Q96JY6 352 aa10.24□□□□□ -0.77
CSDE1-214ENST00000530886 R3HCC1Q9Y3T6 440 aaKnown RBP10.24□□□□□ -0.77
CSDE1-214ENST00000530886 NKTRP30414 1462 aaKnown RBP10.23□□□□□ -0.77
CSDE1-214ENST00000530886 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
CSDE1-214ENST00000530886 ANKRD30AQ9BXX3 1397 aa10.23□□□□□ -0.77
CSDE1-214ENST00000530886 NASPP49321 788 aaPredicted RBP10.23□□□□□ -0.77
CSDE1-214ENST00000530886 CLEC17AQ6ZS10 378 aa10.23□□□□□ -0.77
CSDE1-214ENST00000530886 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
CSDE1-214ENST00000530886 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.23□□□□□ -0.77
CSDE1-214ENST00000530886 A2MP01023 1474 aa10.23□□□□□ -0.77
CSDE1-214ENST00000530886 SLFN5Q08AF3 891 aa10.22□□□□□ -0.77
CSDE1-214ENST00000530886 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
CSDE1-214ENST00000530886 SLC20A2Q08357 652 aa10.22□□□□□ -0.77
CSDE1-214ENST00000530886 ANP32BQ92688 251 aaKnown RBP10.22□□□□□ -0.77
CSDE1-214ENST00000530886 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.77
CSDE1-214ENST00000530886 PIK3C2GO75747 1445 aa10.21□□□□□ -0.77
CSDE1-214ENST00000530886 ARHGEF5Q12774 1597 aa10.21□□□□□ -0.77
CSDE1-214ENST00000530886 HSP90AB1P08238 724 aaKnown RBP10.21□□□□□ -0.77
CSDE1-214ENST00000530886 GTF2F1P35269 517 aaKnown RBP eCLIP10.21□□□□□ -0.771e-7■■■■■ 29.4
CSDE1-214ENST00000530886 MADDQ8WXG6 1647 aa10.21□□□□□ -0.78
CSDE1-214ENST00000530886 RBM25P49756 843 aaKnown RBP10.21□□□□□ -0.78
CSDE1-214ENST00000530886 GBP4Q96PP9 640 aa10.21□□□□□ -0.78
CSDE1-214ENST00000530886 GRIN2AQ12879 1464 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms