RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 FAM9AQ8IZU1 332 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-226ENST00000530720 MAGI2Q86UL8 1455 aa7.61□□□□□ -1.19
CTNND1-226ENST00000530720 PLCH2O75038 1416 aa7.61□□□□□ -1.19
CTNND1-226ENST00000530720 ZNF316A6NFI3 1004 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-226ENST00000530720 MYO5CQ9NQX4 1742 aa7.6□□□□□ -1.19
CTNND1-226ENST00000530720 FER1L4A9Z1Z3 1794 aa7.59□□□□□ -1.19
CTNND1-226ENST00000530720 ARHGEF12Q9NZN5 1544 aa7.59□□□□□ -1.19
CTNND1-226ENST00000530720 KDM5CP41229 1560 aa7.59□□□□□ -1.2
CTNND1-226ENST00000530720 SLC34A2O95436 690 aa7.58□□□□□ -1.2
CTNND1-226ENST00000530720 RNF166Q96A37 237 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-226ENST00000530720 FMN1Q68DA7 1419 aa7.58□□□□□ -1.2
CTNND1-226ENST00000530720 SCAPERQ9BY12 1400 aa7.58□□□□□ -1.2
CTNND1-226ENST00000530720 PPP1R37O75864 691 aa7.57□□□□□ -1.2
CTNND1-226ENST00000530720 TMC2Q8TDI7 906 aa7.57□□□□□ -1.2
CTNND1-226ENST00000530720 CDC42BPBQ9Y5S2 1711 aa7.57□□□□□ -1.2
CTNND1-226ENST00000530720 ARID4BQ4LE39 1312 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-226ENST00000530720 REREQ9P2R6 1566 aa7.56□□□□□ -1.2
CTNND1-226ENST00000530720 DIP2CQ9Y2E4 1556 aa7.56□□□□□ -1.2
CTNND1-226ENST00000530720 TROQ12816 1431 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-226ENST00000530720 C9orf84Q5VXU9 1444 aa7.56□□□□□ -1.2
CTNND1-226ENST00000530720 NUDT7P0C024 238 aa7.56□□□□□ -1.2
CTNND1-226ENST00000530720 MYT1LQ9UL68 1186 aa7.56□□□□□ -1.2
CTNND1-226ENST00000530720 ABCA6Q8N139 1617 aa7.56□□□□□ -1.2
CTNND1-226ENST00000530720 ATP10AO60312 1499 aa7.55□□□□□ -1.2
CTNND1-226ENST00000530720 HSPA2P54652 639 aa7.55□□□□□ -1.2
CTNND1-226ENST00000530720 FBXO41Q8TF61 875 aa7.55□□□□□ -1.2
CTNND1-226ENST00000530720 PCDHGA4Q9Y5G9 962 aa7.55□□□□□ -1.2
CTNND1-226ENST00000530720 PREX2Q70Z35 1606 aa7.55□□□□□ -1.2
CTNND1-226ENST00000530720 PREX1Q8TCU6 1659 aa7.54□□□□□ -1.2
CTNND1-226ENST00000530720 ABCC1P33527 1531 aa7.54□□□□□ -1.2
CTNND1-226ENST00000530720 ARHGAP5Q13017 1502 aa7.54□□□□□ -1.2
CTNND1-226ENST00000530720 PTGER2P43116 358 aa7.54□□□□□ -1.2
CTNND1-226ENST00000530720 ZNF518AQ6AHZ1 1483 aa7.54□□□□□ -1.2
CTNND1-226ENST00000530720 ITSN2Q9NZM3 1697 aa7.54□□□□□ -1.2
CTNND1-226ENST00000530720 CDC42BPAQ5VT25 1732 aa7.53□□□□□ -1.2
CTNND1-226ENST00000530720 LHX6Q9UPM6 363 aa7.53□□□□□ -1.2
CTNND1-226ENST00000530720 STRCQ7RTU9 1775 aa7.53□□□□□ -1.2
CTNND1-226ENST00000530720 CASKIN1Q8WXD9 1431 aa7.52□□□□□ -1.2
CTNND1-226ENST00000530720 KIDINS220Q9ULH0 1771 aa7.52□□□□□ -1.21
CTNND1-226ENST00000530720 MLH3Q9UHC1 1453 aa7.52□□□□□ -1.21
CTNND1-226ENST00000530720 UBTFP17480 764 aaKnown RBP7.52□□□□□ -1.21
CTNND1-226ENST00000530720 EFCAB2Q5VUJ9 269 aa7.52□□□□□ -1.21
CTNND1-226ENST00000530720 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
CTNND1-226ENST00000530720 HS6ST3Q8IZP7 471 aa7.52□□□□□ -1.21
CTNND1-226ENST00000530720 TRAPPC8Q9Y2L5 1435 aa7.52□□□□□ -1.21
CTNND1-226ENST00000530720 C3P01024 1663 aa7.51□□□□□ -1.21
CTNND1-226ENST00000530720 LSM11P83369 360 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTNND1-226ENST00000530720 MLECQ14165 292 aa7.51□□□□□ -1.21
CTNND1-226ENST00000530720 AFAP1Q8N556 730 aa7.51□□□□□ -1.21
CTNND1-226ENST00000530720 AGLP35573 1532 aa7.51□□□□□ -1.21
CTNND1-226ENST00000530720 SAMD9LQ8IVG5 1584 aa7.5□□□□□ -1.21
CTNND1-226ENST00000530720 CCDC18Q5T9S5 1454 aa7.5□□□□□ -1.21
CTNND1-226ENST00000530720 PBX2P40425 430 aa7.5□□□□□ -1.21
CTNND1-226ENST00000530720 CLIP1P30622 1438 aa7.5□□□□□ -1.21
CTNND1-226ENST00000530720 CEBPAP49715 358 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-226ENST00000530720 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
CTNND1-226ENST00000530720 FYCO1Q9BQS8 1478 aa7.49□□□□□ -1.21
CTNND1-226ENST00000530720 FOXK1P85037 733 aa7.48□□□□□ -1.21
CTNND1-226ENST00000530720 ATP1B4Q9UN42 357 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-226ENST00000530720 CDK11AQ9UQ88 783 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-226ENST00000530720 GPATCH8Q9UKJ3 1502 aaKnown RBP7.47□□□□□ -1.21
CTNND1-226ENST00000530720 PLXNC1O60486 1568 aa7.47□□□□□ -1.21
CTNND1-226ENST00000530720 INO80Q9ULG1 1556 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-226ENST00000530720 PTCD2Q8WV60 388 aaKnown RBP7.47□□□□□ -1.21
CTNND1-226ENST00000530720 GPHNQ9NQX3 736 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-226ENST00000530720 SYCP2Q9BX26 1530 aa7.47□□□□□ -1.21
CTNND1-226ENST00000530720 PSDA5PKW4 1024 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-226ENST00000530720 CHGAP10645 457 aaKnown RBP7.46□□□□□ -1.22
CTNND1-226ENST00000530720 PLPP6Q8IY26 295 aa7.46□□□□□ -1.22
CTNND1-226ENST00000530720 CERKQ8TCT0 537 aa7.46□□□□□ -1.22
CTNND1-226ENST00000530720 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.22
CTNND1-226ENST00000530720 MROH2AA6NES4 1674 aa7.46□□□□□ -1.22
CTNND1-226ENST00000530720 LTBP4Q8N2S1 1624 aa7.45□□□□□ -1.22
CTNND1-226ENST00000530720 UHRF1BP1Q6BDS2 1440 aa7.45□□□□□ -1.22
CTNND1-226ENST00000530720 ATP7AQ04656 1500 aa7.44□□□□□ -1.22
CTNND1-226ENST00000530720 DSG2Q14126 1118 aa7.44□□□□□ -1.22
CTNND1-226ENST00000530720 TIAM1Q13009 1591 aa7.43□□□□□ -1.22
CTNND1-226ENST00000530720 SETD1BQ9UPS6 1966 aaKnown RBP7.43□□□□□ -1.22
CTNND1-226ENST00000530720 ARHGAP33O14559 1287 aa7.43□□□□□ -1.22
CTNND1-226ENST00000530720 SUPT6HQ7KZ85 1726 aaKnown RBP7.43□□□□□ -1.22
CTNND1-226ENST00000530720 PTPRTO14522 1441 aa7.43□□□□□ -1.22
CTNND1-226ENST00000530720 NCOA1Q15788 1441 aa7.43□□□□□ -1.22
CTNND1-226ENST00000530720 KIAA1107Q9UPP5 1409 aa7.43□□□□□ -1.22
CTNND1-226ENST00000530720 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
CTNND1-226ENST00000530720 ZNF142P52746 1687 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-226ENST00000530720 CLTCQ00610 1675 aaKnown RBP7.42□□□□□ -1.22
CTNND1-226ENST00000530720 NKX1-1Q15270 411 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-226ENST00000530720 NPATQ14207 1427 aa7.42□□□□□ -1.22
CTNND1-226ENST00000530720 CNTLNQ9NXG0 1405 aa7.42□□□□□ -1.22
CTNND1-226ENST00000530720 MBD5Q9P267 1494 aa7.42□□□□□ -1.22
CTNND1-226ENST00000530720 TBC1D12O60347 775 aa7.41□□□□□ -1.22
CTNND1-226ENST00000530720 CAMSAP1Q5T5Y3 1602 aa7.41□□□□□ -1.22
CTNND1-226ENST00000530720 ADGBQ8N7X0 1667 aa7.41□□□□□ -1.22
CTNND1-226ENST00000530720 HNRNPMP52272 730 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNND1-226ENST00000530720 ADGRD1Q6QNK2 874 aa7.4□□□□□ -1.22
CTNND1-226ENST00000530720 RYDENQ9NUL5 291 aaKnown RBP7.4□□□□□ -1.22
CTNND1-226ENST00000530720 PTPRKQ15262 1439 aa7.4□□□□□ -1.22
CTNND1-226ENST00000530720 A2MP01023 1474 aa7.4□□□□□ -1.22
CTNND1-226ENST00000530720 PLEKHH2Q8IVE3 1493 aa7.4□□□□□ -1.22
CTNND1-226ENST00000530720 EHBP1L1Q8N3D4 1523 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms