RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 TUSC1Q2TAM9 212 aa3.51□□□□□ -1.85
FGFR1-235ENST00000530701 GLMNQ92990 594 aa3.51□□□□□ -1.85
FGFR1-235ENST00000530701 CDCA7LQ96GN5 454 aa3.51□□□□□ -1.85
FGFR1-235ENST00000530701 LIMD1Q9UGP4 676 aa3.51□□□□□ -1.85
FGFR1-235ENST00000530701 COLQQ9Y215 455 aaPredicted RBP3.51□□□□□ -1.85
FGFR1-235ENST00000530701 RCCD1A6NED2 376 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 NBPF26B4DH59 902 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 SPTLC1O15269 473 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 CSB-PGBD3P0DP91 1061 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 DNAJB2P25686 324 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 GJA5P36382 358 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 SLC4A3P48751 1232 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 FOSBP53539 338 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 DOK7Q18PE1 504 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 WASHC4Q2M389 1173 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 RSBN1LQ6PCB5 846 aaPredicted RBP3.5□□□□□ -1.85
FGFR1-235ENST00000530701 RDH13Q8NBN7 331 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 MTMR14Q8NCE2 650 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 GZF1Q9H116 711 aaPredicted RBP3.5□□□□□ -1.85
FGFR1-235ENST00000530701 METRNQ9UJH8 293 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 NDUFB9Q9Y6M9 179 aa3.5□□□□□ -1.85
FGFR1-235ENST00000530701 PSDA5PKW4 1024 aaPredicted RBP3.49□□□□□ -1.85
FGFR1-235ENST00000530701 MOXD2PA6NHM9 499 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 USP17L8P0C7I0 530 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 CD46P15529 392 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 PPP4R3BQ5MIZ7 849 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 PACS2Q86VP3 889 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 ZNF710Q8N1W2 664 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 TSC1Q92574 1164 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 PBXIP1Q96AQ6 731 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 KCNH8Q96L42 1107 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 MYT1LQ9UL68 1186 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 TBC1D2BQ9UPU7 963 aa3.49□□□□□ -1.85
FGFR1-235ENST00000530701 NUDT7P0C024 238 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 RFX1P22670 979 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 USP46P62068 366 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 PRPF38BQ5VTL8 546 aaKnown RBP3.48□□□□□ -1.85
FGFR1-235ENST00000530701 NUDT18Q6ZVK8 323 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 TTC13Q8NBP0 860 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 HELBQ8NG08 1087 aaPredicted RBP3.48□□□□□ -1.85
FGFR1-235ENST00000530701 ADAM33Q9BZ11 813 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 ZBTB3Q9H5J0 574 aa3.48□□□□□ -1.85
FGFR1-235ENST00000530701 POM121CA8CG34 1229 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 LILRB3O75022 631 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 KDM4AO75164 1064 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 GABBR2O75899 941 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 PTPREP23469 700 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 HDGFP51858 240 aaKnown RBP3.47□□□□□ -1.85
FGFR1-235ENST00000530701 MFAP1P55081 439 aaKnown RBP3.47□□□□□ -1.85
FGFR1-235ENST00000530701 KCNA1Q09470 495 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 QPCTQ16769 361 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 GRIPAP1Q4V328 841 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 HDGFL1Q5TGJ6 251 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 PNMA1Q8ND90 353 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 PNMA3Q9UL41 463 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 USTQ9Y2C2 406 aa3.47□□□□□ -1.85
FGFR1-235ENST00000530701 PPP1R3GB7ZBB8 358 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 BRD1O95696 1058 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 FDX1P10109 184 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 NDUFV2P19404 249 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 EVX2Q03828 476 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 IRF5Q13568 498 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 ARSIQ5FYB1 569 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 RTL5Q5HYW3 569 aaPredicted RBP3.46□□□□□ -1.86
FGFR1-235ENST00000530701 PELP1Q8IZL8 1130 aaKnown RBP3.46□□□□□ -1.86
FGFR1-235ENST00000530701 TATDN2Q93075 761 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 EYA1Q99502 592 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 TMEM134Q9H6X4 195 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 ZSWIM6Q9HCJ5 1215 aa3.46□□□□□ -1.86
FGFR1-235ENST00000530701 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.45□□□□□ -1.86
FGFR1-235ENST00000530701 RBM25P49756 843 aaKnown RBP3.45□□□□□ -1.86
FGFR1-235ENST00000530701 SEMA3FQ13275 785 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 MTMR2Q13614 643 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 B4GALNT3Q6L9W6 998 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 CABLES1Q8TDN4 633 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 BCL2L12Q9HB09 334 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 MTMR7Q9Y216 660 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 PCDHB15Q9Y5E8 787 aa3.45□□□□□ -1.86
FGFR1-235ENST00000530701 KDM4FA0A1W2PPD8 638 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 TRIM6-TRIM34B2RNG4 842 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 C6orf229H3BNL8 230 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 LMOD1P29536 600 aaPredicted RBP3.44□□□□□ -1.86
FGFR1-235ENST00000530701 SOX11P35716 441 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 VAC14Q08AM6 782 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 FBXO31Q5XUX0 539 aaPredicted RBP3.44□□□□□ -1.86
FGFR1-235ENST00000530701 RGS22Q8NE09 1264 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 PPP1R12CQ9BZL4 782 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 TSKSQ9UJT2 592 aa3.44□□□□□ -1.86
FGFR1-235ENST00000530701 POTEFA5A3E0 1075 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 E9PSI1 815 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 HOXA2O43364 376 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 COL9A1P20849 921 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 GCGRP47871 477 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 EIF4G2P78344 907 aaKnown RBP eCLIP3.43□□□□□ -1.86
FGFR1-235ENST00000530701 CTDSPL2Q05D32 466 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 CCDC27Q2M243 656 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 KHSRPQ92945 711 aaKnown RBP eCLIP3.43□□□□□ -1.86
FGFR1-235ENST00000530701 LHX6Q9UPM6 363 aa3.43□□□□□ -1.86
FGFR1-235ENST00000530701 PALM3A6NDB9 673 aaPredicted RBP3.42□□□□□ -1.86
FGFR1-235ENST00000530701 SMAPO00193 183 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms