RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
SVIP-204ENST00000530199 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
SVIP-204ENST00000530199 PARP9Q8IXQ6 854 aa12.37□□□□□ -0.43
SVIP-204ENST00000530199 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
SVIP-204ENST00000530199 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
SVIP-204ENST00000530199 WRNQ14191 1432 aaPredicted RBP eCLIP12.36□□□□□ -0.43
SVIP-204ENST00000530199 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
SVIP-204ENST00000530199 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
SVIP-204ENST00000530199 CDHR5Q9HBB8 845 aa12.34□□□□□ -0.43
SVIP-204ENST00000530199 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
SVIP-204ENST00000530199 PTPRGP23470 1445 aa12.34□□□□□ -0.43
SVIP-204ENST00000530199 KIF21BO75037 1637 aa12.33□□□□□ -0.43
SVIP-204ENST00000530199 MAP3K7O43318 606 aa12.33□□□□□ -0.44
SVIP-204ENST00000530199 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
SVIP-204ENST00000530199 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
SVIP-204ENST00000530199 UHRF1BP1LA0JNW5 1464 aa12.33□□□□□ -0.44
SVIP-204ENST00000530199 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
SVIP-204ENST00000530199 SLAIN1Q8ND83 568 aa12.32□□□□□ -0.44
SVIP-204ENST00000530199 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
SVIP-204ENST00000530199 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
SVIP-204ENST00000530199 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
SVIP-204ENST00000530199 CUL7Q14999 1698 aa12.29□□□□□ -0.44
SVIP-204ENST00000530199 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
SVIP-204ENST00000530199 FBXW7Q969H0 707 aa12.28□□□□□ -0.44
SVIP-204ENST00000530199 MAGI3Q5TCQ9 1506 aa12.27□□□□□ -0.44
SVIP-204ENST00000530199 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
SVIP-204ENST00000530199 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
SVIP-204ENST00000530199 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
SVIP-204ENST00000530199 FOSBP53539 338 aa12.24□□□□□ -0.45
SVIP-204ENST00000530199 HSPA2P54652 639 aa12.24□□□□□ -0.45
SVIP-204ENST00000530199 UACAQ9BZF9 1416 aa12.23□□□□□ -0.45
SVIP-204ENST00000530199 REPIN1Q9BWE0 567 aaKnown RBP12.23□□□□□ -0.45
SVIP-204ENST00000530199 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
SVIP-204ENST00000530199 MS4A1P11836 297 aa12.21□□□□□ -0.45
SVIP-204ENST00000530199 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
SVIP-204ENST00000530199 MADDQ8WXG6 1647 aa12.21□□□□□ -0.46
SVIP-204ENST00000530199 ARAP3Q8WWN8 1544 aa12.21□□□□□ -0.46
SVIP-204ENST00000530199 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
SVIP-204ENST00000530199 CARMIL2Q6F5E8 1435 aa12.2□□□□□ -0.46
SVIP-204ENST00000530199 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
SVIP-204ENST00000530199 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
SVIP-204ENST00000530199 CLCN1P35523 988 aa12.19□□□□□ -0.46
SVIP-204ENST00000530199 C6orf132Q5T0Z8 1188 aa12.19□□□□□ -0.46
SVIP-204ENST00000530199 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
SVIP-204ENST00000530199 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
SVIP-204ENST00000530199 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
SVIP-204ENST00000530199 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
SVIP-204ENST00000530199 WDR7Q9Y4E6 1490 aa12.18□□□□□ -0.46
SVIP-204ENST00000530199 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
SVIP-204ENST00000530199 NUDT7P0C024 238 aa12.17□□□□□ -0.46
SVIP-204ENST00000530199 HOXB3P14651 431 aaPredicted RBP12.17□□□□□ -0.46
SVIP-204ENST00000530199 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
SVIP-204ENST00000530199 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
SVIP-204ENST00000530199 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
SVIP-204ENST00000530199 ZCCHC11Q5TAX3 1644 aaKnown RBP12.17□□□□□ -0.46
SVIP-204ENST00000530199 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
SVIP-204ENST00000530199 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.46
SVIP-204ENST00000530199 ARXQ96QS3 562 aa12.16□□□□□ -0.46
SVIP-204ENST00000530199 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
SVIP-204ENST00000530199 OATP04181 439 aa12.15□□□□□ -0.46
SVIP-204ENST00000530199 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
SVIP-204ENST00000530199 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
SVIP-204ENST00000530199 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
SVIP-204ENST00000530199 TTBK1Q5TCY1 1321 aaPredicted RBP12.14□□□□□ -0.47
SVIP-204ENST00000530199 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
SVIP-204ENST00000530199 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
SVIP-204ENST00000530199 METTL3Q86U44 580 aaKnown RBP12.14□□□□□ -0.47
SVIP-204ENST00000530199 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
SVIP-204ENST00000530199 TTC13Q8NBP0 860 aa12.13□□□□□ -0.47
SVIP-204ENST00000530199 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
SVIP-204ENST00000530199 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
SVIP-204ENST00000530199 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
SVIP-204ENST00000530199 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
SVIP-204ENST00000530199 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
SVIP-204ENST00000530199 ZMYND15Q9H091 742 aa12.12□□□□□ -0.47
SVIP-204ENST00000530199 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
SVIP-204ENST00000530199 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
SVIP-204ENST00000530199 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
SVIP-204ENST00000530199 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
SVIP-204ENST00000530199 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
SVIP-204ENST00000530199 PRSS12P56730 875 aa12.08□□□□□ -0.48
SVIP-204ENST00000530199 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
SVIP-204ENST00000530199 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
SVIP-204ENST00000530199 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
SVIP-204ENST00000530199 ARID4BQ4LE39 1312 aaPredicted RBP12.08□□□□□ -0.48
SVIP-204ENST00000530199 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
SVIP-204ENST00000530199 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
SVIP-204ENST00000530199 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
SVIP-204ENST00000530199 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
SVIP-204ENST00000530199 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
SVIP-204ENST00000530199 LHX6Q9UPM6 363 aa12.06□□□□□ -0.48
SVIP-204ENST00000530199 LTBP4Q8N2S1 1624 aa12.06□□□□□ -0.48
SVIP-204ENST00000530199 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
SVIP-204ENST00000530199 FLIIQ13045 1269 aa12.05□□□□□ -0.48
SVIP-204ENST00000530199 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
SVIP-204ENST00000530199 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
SVIP-204ENST00000530199 IGF1RP08069 1367 aa12.05□□□□□ -0.48
SVIP-204ENST00000530199 PTPRTO14522 1441 aa12.04□□□□□ -0.48
SVIP-204ENST00000530199 SKIV2LQ15477 1246 aaKnown RBP12.03□□□□□ -0.48
SVIP-204ENST00000530199 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms