RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
PPP1CA-206ENST00000529724 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
PPP1CA-206ENST00000529724 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
PPP1CA-206ENST00000529724 ATAD2Q6PL18 1390 aa17.12■□□□□ 0.33
PPP1CA-206ENST00000529724 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
PPP1CA-206ENST00000529724 QTRT2Q9H974 415 aaKnown RBP17.11■□□□□ 0.33
PPP1CA-206ENST00000529724 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
PPP1CA-206ENST00000529724 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
PPP1CA-206ENST00000529724 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
PPP1CA-206ENST00000529724 IDI1Q13907 227 aa17.09■□□□□ 0.33
PPP1CA-206ENST00000529724 EP400Q96L91 3159 aa17.08■□□□□ 0.33
PPP1CA-206ENST00000529724 FOXD1Q16676 465 aa17.08■□□□□ 0.32
PPP1CA-206ENST00000529724 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
PPP1CA-206ENST00000529724 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-206ENST00000529724 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
PPP1CA-206ENST00000529724 C8orf37Q96NL8 207 aa17.06■□□□□ 0.32
PPP1CA-206ENST00000529724 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
PPP1CA-206ENST00000529724 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
PPP1CA-206ENST00000529724 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
PPP1CA-206ENST00000529724 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
PPP1CA-206ENST00000529724 BCANQ96GW7 911 aa17.02■□□□□ 0.32
PPP1CA-206ENST00000529724 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.31
PPP1CA-206ENST00000529724 ATF3P18847 181 aa17.01■□□□□ 0.31
PPP1CA-206ENST00000529724 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
PPP1CA-206ENST00000529724 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
PPP1CA-206ENST00000529724 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
PPP1CA-206ENST00000529724 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
PPP1CA-206ENST00000529724 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
PPP1CA-206ENST00000529724 NOS1P29475 1434 aa16.99■□□□□ 0.31
PPP1CA-206ENST00000529724 LRP5O75197 1615 aa16.99■□□□□ 0.31
PPP1CA-206ENST00000529724 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
PPP1CA-206ENST00000529724 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
PPP1CA-206ENST00000529724 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
PPP1CA-206ENST00000529724 CCDC125Q86Z20 511 aa16.96■□□□□ 0.31
PPP1CA-206ENST00000529724 LRRC59Q96AG4 307 aaKnown RBP16.96■□□□□ 0.31
PPP1CA-206ENST00000529724 ERBINQ96RT1 1412 aa16.96■□□□□ 0.3
PPP1CA-206ENST00000529724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
PPP1CA-206ENST00000529724 ADAMTS13Q76LX8 1427 aa16.95■□□□□ 0.3
PPP1CA-206ENST00000529724 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
PPP1CA-206ENST00000529724 ADAMTS2O95450 1211 aa16.93■□□□□ 0.3
PPP1CA-206ENST00000529724 ATRNO75882 1429 aa16.93■□□□□ 0.3
PPP1CA-206ENST00000529724 DCCP43146 1447 aa16.93■□□□□ 0.3
PPP1CA-206ENST00000529724 MST1RQ04912 1400 aa16.93■□□□□ 0.3
PPP1CA-206ENST00000529724 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
PPP1CA-206ENST00000529724 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
PPP1CA-206ENST00000529724 USP21Q9UK80 565 aa16.92■□□□□ 0.3
PPP1CA-206ENST00000529724 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
PPP1CA-206ENST00000529724 SLC52A1Q9NWF4 448 aa16.91■□□□□ 0.3
PPP1CA-206ENST00000529724 KANK1Q14678 1352 aa16.9■□□□□ 0.3
PPP1CA-206ENST00000529724 PIK3R4Q99570 1358 aa16.9■□□□□ 0.3
PPP1CA-206ENST00000529724 PPP1R15AO75807 674 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-206ENST00000529724 MYO5BQ9ULV0 1848 aa16.89■□□□□ 0.29
PPP1CA-206ENST00000529724 PTPRUQ92729 1446 aa16.89■□□□□ 0.29
PPP1CA-206ENST00000529724 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
PPP1CA-206ENST00000529724 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
PPP1CA-206ENST00000529724 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
PPP1CA-206ENST00000529724 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
PPP1CA-206ENST00000529724 DEFB132Q7Z7B7 95 aa16.85■□□□□ 0.29
PPP1CA-206ENST00000529724 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
PPP1CA-206ENST00000529724 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
PPP1CA-206ENST00000529724 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
PPP1CA-206ENST00000529724 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-206ENST00000529724 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
PPP1CA-206ENST00000529724 TRPM2O94759 1503 aa16.84■□□□□ 0.29
PPP1CA-206ENST00000529724 BCL9LQ86UU0 1499 aa16.81■□□□□ 0.28
PPP1CA-206ENST00000529724 ABCC5O15440 1437 aa16.81■□□□□ 0.28
PPP1CA-206ENST00000529724 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.81■□□□□ 0.28
PPP1CA-206ENST00000529724 XRN1Q8IZH2 1706 aaKnown RBP16.8■□□□□ 0.28
PPP1CA-206ENST00000529724 CROCC2H7BZ55 1655 aa16.8■□□□□ 0.28
PPP1CA-206ENST00000529724 LAMC1P11047 1609 aa16.8■□□□□ 0.28
PPP1CA-206ENST00000529724 HRCP23327 699 aa16.79■□□□□ 0.28
PPP1CA-206ENST00000529724 RPRD2Q5VT52 1461 aaKnown RBP16.79■□□□□ 0.28
PPP1CA-206ENST00000529724 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-206ENST00000529724 PSDA5PKW4 1024 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-206ENST00000529724 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-206ENST00000529724 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
PPP1CA-206ENST00000529724 UNC13BO14795 1591 aa16.76■□□□□ 0.27
PPP1CA-206ENST00000529724 MYOM2P54296 1465 aa16.75■□□□□ 0.27
PPP1CA-206ENST00000529724 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
PPP1CA-206ENST00000529724 COL22A1Q8NFW1 1626 aaPredicted RBP16.75■□□□□ 0.27
PPP1CA-206ENST00000529724 GLI3P10071 1580 aa16.73■□□□□ 0.27
PPP1CA-206ENST00000529724 NRXN3Q9Y4C0 1643 aa16.73■□□□□ 0.27
PPP1CA-206ENST00000529724 YY1P25490 414 aa16.72■□□□□ 0.27
PPP1CA-206ENST00000529724 NALCNQ8IZF0 1738 aa16.72■□□□□ 0.27
PPP1CA-206ENST00000529724 DAPK1P53355 1430 aa16.71■□□□□ 0.27
PPP1CA-206ENST00000529724 BRWD3Q6RI45 1802 aa16.71■□□□□ 0.27
PPP1CA-206ENST00000529724 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
PPP1CA-206ENST00000529724 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
PPP1CA-206ENST00000529724 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
PPP1CA-206ENST00000529724 SF3B2Q13435 895 aaKnown RBP16.7■□□□□ 0.26
PPP1CA-206ENST00000529724 ORAI2Q96SN7 254 aa16.69■□□□□ 0.26
PPP1CA-206ENST00000529724 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
PPP1CA-206ENST00000529724 METP08581 1390 aa16.68■□□□□ 0.26
PPP1CA-206ENST00000529724 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
PPP1CA-206ENST00000529724 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
PPP1CA-206ENST00000529724 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
PPP1CA-206ENST00000529724 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
PPP1CA-206ENST00000529724 SLIT2O94813 1529 aa16.65■□□□□ 0.26
PPP1CA-206ENST00000529724 PTPN23Q9H3S7 1636 aa16.64■□□□□ 0.25
PPP1CA-206ENST00000529724 IFFO2Q5TF58 517 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms