RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, humanhuman

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-208ENST00000529524 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
PSMA1-208ENST00000529524 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
PSMA1-208ENST00000529524 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
PSMA1-208ENST00000529524 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.97□□□□□ -0.65
PSMA1-208ENST00000529524 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
PSMA1-208ENST00000529524 GNPATO15228 680 aa10.97□□□□□ -0.65
PSMA1-208ENST00000529524 PCDHB3Q9Y5E6 796 aa10.96□□□□□ -0.65
PSMA1-208ENST00000529524 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
PSMA1-208ENST00000529524 FECHP22830 423 aa10.94□□□□□ -0.66
PSMA1-208ENST00000529524 KMT5BQ4FZB7 885 aa10.94□□□□□ -0.66
PSMA1-208ENST00000529524 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
PSMA1-208ENST00000529524 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
PSMA1-208ENST00000529524 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
PSMA1-208ENST00000529524 METTL3Q86U44 580 aaKnown RBP10.92□□□□□ -0.66
PSMA1-208ENST00000529524 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
PSMA1-208ENST00000529524 CFHP08603 1231 aa10.91□□□□□ -0.66
PSMA1-208ENST00000529524 ZPR1O75312 459 aa10.9□□□□□ -0.66
PSMA1-208ENST00000529524 GGCXP38435 758 aa10.9□□□□□ -0.66
PSMA1-208ENST00000529524 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
PSMA1-208ENST00000529524 BLOC1S3Q6QNY0 202 aa10.89□□□□□ -0.67
PSMA1-208ENST00000529524 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
PSMA1-208ENST00000529524 SLC10A3P09131 477 aa10.87□□□□□ -0.67
PSMA1-208ENST00000529524 GPR37O15354 613 aa10.86□□□□□ -0.67
PSMA1-208ENST00000529524 RDH13Q8NBN7 331 aa10.86□□□□□ -0.67
PSMA1-208ENST00000529524 PRKD2Q9BZL6 878 aa10.86□□□□□ -0.67
PSMA1-208ENST00000529524 DAXXQ9UER7 740 aaPredicted RBP10.85□□□□□ -0.67
PSMA1-208ENST00000529524 NLRP7Q8WX94 980 aa10.84□□□□□ -0.67
PSMA1-208ENST00000529524 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
PSMA1-208ENST00000529524 NR1I2O75469 434 aa10.82□□□□□ -0.68
PSMA1-208ENST00000529524 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
PSMA1-208ENST00000529524 TLL1O43897 1013 aa10.79□□□□□ -0.68
PSMA1-208ENST00000529524 PUS10Q3MIT2 529 aaKnown RBP10.79□□□□□ -0.68
PSMA1-208ENST00000529524 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
PSMA1-208ENST00000529524 GFRA3O60609 400 aa10.78□□□□□ -0.68
PSMA1-208ENST00000529524 Q6ZNB5 142 aa10.78□□□□□ -0.68
PSMA1-208ENST00000529524 SCUBE3Q8IX30 993 aa10.78□□□□□ -0.68
PSMA1-208ENST00000529524 PHOX2BQ99453 314 aa10.78□□□□□ -0.68
PSMA1-208ENST00000529524 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
PSMA1-208ENST00000529524 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
PSMA1-208ENST00000529524 LAPTM4AQ15012 233 aa10.76□□□□□ -0.69
PSMA1-208ENST00000529524 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
PSMA1-208ENST00000529524 PPEF1O14829 653 aaPredicted RBP10.74□□□□□ -0.69
PSMA1-208ENST00000529524 IRF6O14896 467 aa10.74□□□□□ -0.69
PSMA1-208ENST00000529524 S1PR4O95977 384 aa10.74□□□□□ -0.69
PSMA1-208ENST00000529524 ADH1BP00325 375 aa10.73□□□□□ -0.69
PSMA1-208ENST00000529524 FUT2Q10981 343 aa10.73□□□□□ -0.69
PSMA1-208ENST00000529524 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
PSMA1-208ENST00000529524 SLC19A1P41440 591 aa10.72□□□□□ -0.69
PSMA1-208ENST00000529524 GCGRP47871 477 aa10.72□□□□□ -0.69
PSMA1-208ENST00000529524 SPSB2Q99619 263 aa10.72□□□□□ -0.69
PSMA1-208ENST00000529524 SLC6A16Q9GZN6 736 aa10.72□□□□□ -0.69
PSMA1-208ENST00000529524 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
PSMA1-208ENST00000529524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
PSMA1-208ENST00000529524 KRI1Q8N9T8 703 aaKnown RBP10.7□□□□□ -0.7
PSMA1-208ENST00000529524 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
PSMA1-208ENST00000529524 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
PSMA1-208ENST00000529524 MORN1Q5T089 497 aa10.69□□□□□ -0.7
PSMA1-208ENST00000529524 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
PSMA1-208ENST00000529524 PDZRN3Q9UPQ7 1066 aa10.69□□□□□ -0.7
PSMA1-208ENST00000529524 FMNL1O95466 1100 aaPredicted RBP10.67□□□□□ -0.7
PSMA1-208ENST00000529524 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
PSMA1-208ENST00000529524 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
PSMA1-208ENST00000529524 LMOD2Q6P5Q4 547 aa10.66□□□□□ -0.7
PSMA1-208ENST00000529524 CCDC102AQ96A19 550 aa10.66□□□□□ -0.7
PSMA1-208ENST00000529524 CD46P15529 392 aa10.62□□□□□ -0.71
PSMA1-208ENST00000529524 SPRYD7Q5W111 196 aa10.62□□□□□ -0.71
PSMA1-208ENST00000529524 TRAF7Q6Q0C0 670 aa10.62□□□□□ -0.71
PSMA1-208ENST00000529524 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
PSMA1-208ENST00000529524 KDM4AO75164 1064 aa10.61□□□□□ -0.71
PSMA1-208ENST00000529524 CLCN1P35523 988 aa10.61□□□□□ -0.71
PSMA1-208ENST00000529524 ZNF598Q86UK7 904 aaKnown RBP10.61□□□□□ -0.71
PSMA1-208ENST00000529524 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
PSMA1-208ENST00000529524 THAP11Q96EK4 314 aa10.6□□□□□ -0.71
PSMA1-208ENST00000529524 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
PSMA1-208ENST00000529524 Q3C1V9 767 aa10.59□□□□□ -0.71
PSMA1-208ENST00000529524 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
PSMA1-208ENST00000529524 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
PSMA1-208ENST00000529524 BRICD5Q6PL45 260 aa10.58□□□□□ -0.72
PSMA1-208ENST00000529524 FAM160A2Q8N612 972 aaPredicted RBP10.58□□□□□ -0.72
PSMA1-208ENST00000529524 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
PSMA1-208ENST00000529524 FCF1Q9Y324 198 aaKnown RBP10.57□□□□□ -0.72
PSMA1-208ENST00000529524 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
PSMA1-208ENST00000529524 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
PSMA1-208ENST00000529524 USP46P62068 366 aa10.55□□□□□ -0.72
PSMA1-208ENST00000529524 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
PSMA1-208ENST00000529524 ZBTB24O43167 697 aaPredicted RBP10.54□□□□□ -0.72
PSMA1-208ENST00000529524 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
PSMA1-208ENST00000529524 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
PSMA1-208ENST00000529524 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
PSMA1-208ENST00000529524 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
PSMA1-208ENST00000529524 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
PSMA1-208ENST00000529524 ZMYND10O75800 440 aa10.53□□□□□ -0.72
PSMA1-208ENST00000529524 FOXC1Q12948 553 aa10.53□□□□□ -0.72
PSMA1-208ENST00000529524 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
PSMA1-208ENST00000529524 PKDCCQ504Y2 493 aa10.53□□□□□ -0.72
PSMA1-208ENST00000529524 TRIM67Q6ZTA4 783 aa10.52□□□□□ -0.73
PSMA1-208ENST00000529524 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
PSMA1-208ENST00000529524 RPIAP49247 311 aa10.51□□□□□ -0.73
PSMA1-208ENST00000529524 MSS51Q4VC12 460 aa10.51□□□□□ -0.73
PSMA1-208ENST00000529524 HLA-CQ95604 372 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms