RNA–Protein interactions for RNA: ENST00000528627.1

NSD3-208, Transcript of nuclear receptor binding SET domain protein 3, human

TSL 2

Gene NSD3, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSD3-208	ENST00000528627	DAXX	Q9UER7	740 aa	Predicted RBP	11.4	□□□□□ -0.58
NSD3-208	ENST00000528627	SOWAHB	A6NEL2	793 aa		11.4	□□□□□ -0.59
NSD3-208	ENST00000528627	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.4	□□□□□ -0.59
NSD3-208	ENST00000528627	NYAP1	Q6ZVC0	841 aa		11.4	□□□□□ -0.59
NSD3-208	ENST00000528627	REPIN1	Q9BWE0	567 aa	Known RBP	11.4	□□□□□ -0.59
NSD3-208	ENST00000528627	GPCPD1	Q9NPB8	672 aa		11.4	□□□□□ -0.59
NSD3-208	ENST00000528627	NBPF26	B4DH59	902 aa		11.39	□□□□□ -0.59
NSD3-208	ENST00000528627	IFFO2	Q5TF58	517 aa		11.39	□□□□□ -0.59
NSD3-208	ENST00000528627	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.39	□□□□□ -0.59
NSD3-208	ENST00000528627	MDM2	Q00987	491 aa	Predicted RBP	11.38	□□□□□ -0.59
NSD3-208	ENST00000528627	C3orf80	F5H4A9	247 aa		11.37	□□□□□ -0.59
NSD3-208	ENST00000528627	NUDT18	Q6ZVK8	323 aa		11.37	□□□□□ -0.59
NSD3-208	ENST00000528627	TATDN2	Q93075	761 aa		11.37	□□□□□ -0.59
NSD3-208	ENST00000528627	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.36	□□□□□ -0.59
NSD3-208	ENST00000528627	BCAM	P50895	628 aa		11.36	□□□□□ -0.59
NSD3-208	ENST00000528627	FAM117A	Q9C073	453 aa		11.36	□□□□□ -0.59
NSD3-208	ENST00000528627	PNMA3	Q9UL41	463 aa		11.36	□□□□□ -0.59
NSD3-208	ENST00000528627	IL27	Q8NEV9	243 aa		11.35	□□□□□ -0.59
NSD3-208	ENST00000528627	DDRGK1	Q96HY6	314 aa		11.35	□□□□□ -0.59
NSD3-208	ENST00000528627	LRCH3	Q96II8	777 aa		11.35	□□□□□ -0.59
NSD3-208	ENST00000528627	NLRP7	Q8WX94	980 aa		11.35	□□□□□ -0.59
NSD3-208	ENST00000528627	RCCD1	A6NED2	376 aa		11.34	□□□□□ -0.59
NSD3-208	ENST00000528627	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.34	□□□□□ -0.59
NSD3-208	ENST00000528627	MS4A1	P11836	297 aa		11.33	□□□□□ -0.6
NSD3-208	ENST00000528627	DNAJB2	P25686	324 aa		11.32	□□□□□ -0.6
NSD3-208	ENST00000528627	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.32	□□□□□ -0.6
NSD3-208	ENST00000528627	PLEKHG3	A1L390	1219 aa		11.31	□□□□□ -0.6
NSD3-208	ENST00000528627	TSR3	Q9UJK0	312 aa	Known RBP	11.31	□□□□□ -0.6
NSD3-208	ENST00000528627	SMAP	O00193	183 aa		11.3	□□□□□ -0.6
NSD3-208	ENST00000528627	RGS20	O76081	388 aa		11.3	□□□□□ -0.6
NSD3-208	ENST00000528627	SSTR3	P32745	418 aa	Predicted RBP	11.3	□□□□□ -0.6
NSD3-208	ENST00000528627	TMEM134	Q9H6X4	195 aa		11.3	□□□□□ -0.6
NSD3-208	ENST00000528627	HPS5	Q9UPZ3	1129 aa		11.29	□□□□□ -0.6
NSD3-208	ENST00000528627	ITGBL1	O95965	494 aa	Predicted RBP	11.28	□□□□□ -0.6
NSD3-208	ENST00000528627	WBP1L	Q9NX94	342 aa		11.28	□□□□□ -0.6
NSD3-208	ENST00000528627		A0A0G2JS52	829 aa		11.27	□□□□□ -0.61
NSD3-208	ENST00000528627	GTF3C3	Q9Y5Q9	886 aa		11.25	□□□□□ -0.61
NSD3-208	ENST00000528627	HDGF	P51858	240 aa	Known RBP	11.25	□□□□□ -0.61
NSD3-208	ENST00000528627	SULF1	Q8IWU6	871 aa		11.24	□□□□□ -0.61
NSD3-208	ENST00000528627	BEGAIN	Q9BUH8	593 aa		11.24	□□□□□ -0.61
NSD3-208	ENST00000528627	PPP4C	P60510	307 aa		11.23	□□□□□ -0.61
NSD3-208	ENST00000528627	GOPC	Q9HD26	462 aa		11.23	□□□□□ -0.61
NSD3-208	ENST00000528627	SAMD7	Q7Z3H4	446 aa		11.22	□□□□□ -0.61
NSD3-208	ENST00000528627	KCNC4	Q03721	635 aa		11.21	□□□□□ -0.61
NSD3-208	ENST00000528627	NECTIN2	Q92692	538 aa		11.21	□□□□□ -0.61
NSD3-208	ENST00000528627	CD46	P15529	392 aa		11.2	□□□□□ -0.62
NSD3-208	ENST00000528627	DDX11L8	A8MPP1	907 aa		11.19	□□□□□ -0.62
NSD3-208	ENST00000528627	SWT1	Q5T5J6	900 aa	Known RBP	11.19	□□□□□ -0.62
NSD3-208	ENST00000528627	SLC4A3	P48751	1232 aa		11.18	□□□□□ -0.62
NSD3-208	ENST00000528627	SH3D19	Q5HYK7	790 aa		11.18	□□□□□ -0.62
NSD3-208	ENST00000528627	RSPH6A	Q9H0K4	717 aa		11.18	□□□□□ -0.62
NSD3-208	ENST00000528627	RNF40	O75150	1001 aa		11.15	□□□□□ -0.62
NSD3-208	ENST00000528627	DIXDC1	Q155Q3	683 aa		11.14	□□□□□ -0.63
NSD3-208	ENST00000528627	SKIV2L	Q15477	1246 aa	Known RBP	11.13	□□□□□ -0.63
NSD3-208	ENST00000528627	RSPH4A	Q5TD94	716 aa		11.13	□□□□□ -0.63
NSD3-208	ENST00000528627	SLF2	Q8IX21	1173 aa		11.13	□□□□□ -0.63
NSD3-208	ENST00000528627	RDH13	Q8NBN7	331 aa		11.13	□□□□□ -0.63
NSD3-208	ENST00000528627	TBC1D2	Q9BYX2	928 aa		11.13	□□□□□ -0.63
NSD3-208	ENST00000528627	SLC10A3	P09131	477 aa		11.12	□□□□□ -0.63
NSD3-208	ENST00000528627	MYSM1	Q5VVJ2	828 aa		11.12	□□□□□ -0.63
NSD3-208	ENST00000528627	SPIRE2	Q8WWL2	714 aa		11.11	□□□□□ -0.63
NSD3-208	ENST00000528627	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.11	□□□□□ -0.63
NSD3-208	ENST00000528627	GCGR	P47871	477 aa		11.1	□□□□□ -0.63
NSD3-208	ENST00000528627	NUTM1	Q86Y26	1132 aa		11.09	□□□□□ -0.63
NSD3-208	ENST00000528627	PRR14	Q9BWN1	585 aa		11.08	□□□□□ -0.64
NSD3-208	ENST00000528627	IRX2	Q9BZI1	471 aa	Predicted RBP	11.08	□□□□□ -0.64
NSD3-208	ENST00000528627	IL21	Q9HBE4	155 aa		11.08	□□□□□ -0.64
NSD3-208	ENST00000528627	KDM4A	O75164	1064 aa		11.07	□□□□□ -0.64
NSD3-208	ENST00000528627	CLK2	P49760	499 aa	Known RBP	11.07	□□□□□ -0.64
NSD3-208	ENST00000528627	POLR3E	Q9NVU0	708 aa		11.07	□□□□□ -0.64
NSD3-208	ENST00000528627	TJAP1	Q5JTD0	557 aa		11.06	□□□□□ -0.64
NSD3-208	ENST00000528627	MTR	Q99707	1265 aa		11.06	□□□□□ -0.64
NSD3-208	ENST00000528627	USP46	P62068	366 aa		11.05	□□□□□ -0.64
NSD3-208	ENST00000528627	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
NSD3-208	ENST00000528627	GJA5	P36382	358 aa		11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	SPTLC1	O15269	473 aa		11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	APLP1	P51693	650 aa		11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	TUSC1	Q2TAM9	212 aa		11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	ERICH6	Q7L0X2	663 aa		11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	RIC3	Q7Z5B4	369 aa		11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.04	□□□□□ -0.64
NSD3-208	ENST00000528627	MOXD2P	A6NHM9	499 aa		11.03	□□□□□ -0.64
NSD3-208	ENST00000528627	CFH	P08603	1231 aa		11.03	□□□□□ -0.64
NSD3-208	ENST00000528627	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.03	□□□□□ -0.64
NSD3-208	ENST00000528627	LIMD1	Q9UGP4	676 aa		11.03	□□□□□ -0.64
NSD3-208	ENST00000528627	HOXA2	O43364	376 aa		11.01	□□□□□ -0.65
NSD3-208	ENST00000528627	NDUFV2	P19404	249 aa		10.99	□□□□□ -0.65
NSD3-208	ENST00000528627	TIMELESS	Q9UNS1	1208 aa		10.99	□□□□□ -0.65
NSD3-208	ENST00000528627	FUT2	Q10981	343 aa		10.99	□□□□□ -0.65
NSD3-208	ENST00000528627	KMT5B	Q4FZB7	885 aa		10.99	□□□□□ -0.65
NSD3-208	ENST00000528627	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.98	□□□□□ -0.65
NSD3-208	ENST00000528627	GRIPAP1	Q4V328	841 aa		10.97	□□□□□ -0.65
NSD3-208	ENST00000528627	ACTN4	O43707	911 aa	Known RBP	10.96	□□□□□ -0.65
NSD3-208	ENST00000528627	GGCX	P38435	758 aa		10.96	□□□□□ -0.65
NSD3-208	ENST00000528627	PPP2R2D	Q66LE6	453 aa		10.96	□□□□□ -0.65
NSD3-208	ENST00000528627	FDX1	P10109	184 aa		10.95	□□□□□ -0.66
NSD3-208	ENST00000528627	ATP6V1A	P38606	617 aa		10.95	□□□□□ -0.66
NSD3-208	ENST00000528627	COPS2	P61201	443 aa		10.94	□□□□□ -0.66
NSD3-208	ENST00000528627	PRPF38B	Q5VTL8	546 aa	Known RBP	10.94	□□□□□ -0.66
NSD3-208	ENST00000528627	ZNF516	Q92618	1163 aa		10.94	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms