RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 PLA2R1Q13018 1463 aa9.03□□□□□ -0.96
MACF1-228ENST00000528611 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
MACF1-228ENST00000528611 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
MACF1-228ENST00000528611 IDI1Q13907 227 aa9.01□□□□□ -0.97
MACF1-228ENST00000528611 THEMISQ8N1K5 641 aaPredicted RBP9.01□□□□□ -0.97
MACF1-228ENST00000528611 A2ML1A8K2U0 1454 aa9.01□□□□□ -0.97
MACF1-228ENST00000528611 SYNMO15061 1565 aa9□□□□□ -0.97
MACF1-228ENST00000528611 ZFYVE9O95405 1425 aa9□□□□□ -0.97
MACF1-228ENST00000528611 UHRF1BP1Q6BDS2 1440 aa9□□□□□ -0.97
MACF1-228ENST00000528611 POLA2Q14181 598 aa9□□□□□ -0.97
MACF1-228ENST00000528611 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
MACF1-228ENST00000528611 ABCF1Q8NE71 845 aaKnown RBP eCLIP9□□□□□ -0.97
MACF1-228ENST00000528611 KIF1BO60333 1816 aa9□□□□□ -0.97
MACF1-228ENST00000528611 ZNF142P52746 1687 aaPredicted RBP9□□□□□ -0.97
MACF1-228ENST00000528611 SPATA31E1Q6ZUB1 1445 aa8.99□□□□□ -0.97
MACF1-228ENST00000528611 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
MACF1-228ENST00000528611 VGFO15240 615 aaPredicted RBP8.98□□□□□ -0.97
MACF1-228ENST00000528611 ADGRB3O60242 1522 aa8.98□□□□□ -0.97
MACF1-228ENST00000528611 UGGT1Q9NYU2 1555 aa8.98□□□□□ -0.97
MACF1-228ENST00000528611 TMEM131LA2VDJ0 1609 aa8.98□□□□□ -0.97
MACF1-228ENST00000528611 SLIT1O75093 1534 aa8.97□□□□□ -0.97
MACF1-228ENST00000528611 CEBPAP49715 358 aaPredicted RBP8.97□□□□□ -0.97
MACF1-228ENST00000528611 STAG3Q9UJ98 1225 aa8.97□□□□□ -0.97
MACF1-228ENST00000528611 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
MACF1-228ENST00000528611 CLTCL1P53675 1640 aa8.97□□□□□ -0.97
MACF1-228ENST00000528611 MYO3AQ8NEV4 1616 aa8.97□□□□□ -0.97
MACF1-228ENST00000528611 ARHGAP23Q9P227 1491 aa8.96□□□□□ -0.97
MACF1-228ENST00000528611 TONSLQ96HA7 1378 aa8.96□□□□□ -0.98
MACF1-228ENST00000528611 TMEM2Q9UHN6 1383 aa8.96□□□□□ -0.98
MACF1-228ENST00000528611 CFAP65Q6ZU64 1925 aaKnown RBP8.95□□□□□ -0.98
MACF1-228ENST00000528611 UBR1Q8IWV7 1749 aa8.95□□□□□ -0.98
MACF1-228ENST00000528611 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
MACF1-228ENST00000528611 MYOM2P54296 1465 aa8.95□□□□□ -0.98
MACF1-228ENST00000528611 MYCNP04198 464 aaPredicted RBP8.94□□□□□ -0.98
MACF1-228ENST00000528611 ANKLE2Q86XL3 938 aa8.93□□□□□ -0.98
MACF1-228ENST00000528611 AKT1S1Q96B36 256 aa8.93□□□□□ -0.98
MACF1-228ENST00000528611 MED14O60244 1454 aa8.93□□□□□ -0.98
MACF1-228ENST00000528611 NRXN1Q9ULB1 1477 aa8.92□□□□□ -0.98
MACF1-228ENST00000528611 SIN3AQ96ST3 1273 aa8.92□□□□□ -0.98
MACF1-228ENST00000528611 LMTK3Q96Q04 1460 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 RIMS2Q9UQ26 1411 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 PIK3R4Q99570 1358 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 PLEKHG1Q9ULL1 1385 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 PPP1R15AO75807 674 aaPredicted RBP8.91□□□□□ -0.98
MACF1-228ENST00000528611 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
MACF1-228ENST00000528611 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 PPLO60437 1756 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
MACF1-228ENST00000528611 NEXMIFQ5QGS0 1516 aa8.9□□□□□ -0.98
MACF1-228ENST00000528611 SCAF11Q99590 1463 aaKnown RBP8.9□□□□□ -0.98
MACF1-228ENST00000528611 SLC24A1O60721 1099 aa8.9□□□□□ -0.98
MACF1-228ENST00000528611 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
MACF1-228ENST00000528611 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
MACF1-228ENST00000528611 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
MACF1-228ENST00000528611 LAMC1P11047 1609 aa8.9□□□□□ -0.99
MACF1-228ENST00000528611 KIAA1210Q9ULL0 1709 aa8.89□□□□□ -0.99
MACF1-228ENST00000528611 RGL3Q3MIN7 710 aa8.89□□□□□ -0.99
MACF1-228ENST00000528611 TXNDC2Q86VQ3 553 aa8.89□□□□□ -0.99
MACF1-228ENST00000528611 TBX22Q9Y458 520 aa8.89□□□□□ -0.99
MACF1-228ENST00000528611 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
MACF1-228ENST00000528611 SETBP1Q9Y6X0 1596 aa8.89□□□□□ -0.99
MACF1-228ENST00000528611 PIK3C2GO75747 1445 aa8.88□□□□□ -0.99
MACF1-228ENST00000528611 C14orf93Q9H972 538 aaKnown RBP8.88□□□□□ -0.99
MACF1-228ENST00000528611 PRAG1Q86YV5 1406 aa8.88□□□□□ -0.99
MACF1-228ENST00000528611 SIRT1Q96EB6 747 aa8.87□□□□□ -0.99
MACF1-228ENST00000528611 GPRASP1Q5JY77 1395 aa8.86□□□□□ -0.99
MACF1-228ENST00000528611 MYO5BQ9ULV0 1848 aa8.86□□□□□ -0.99
MACF1-228ENST00000528611 POLR1AO95602 1720 aaPredicted RBP8.85□□□□□ -0.99
MACF1-228ENST00000528611 LTKP29376 864 aa8.85□□□□□ -0.99
MACF1-228ENST00000528611 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
MACF1-228ENST00000528611 ADGRF5Q8IZF2 1346 aa8.84□□□□□ -0.99
MACF1-228ENST00000528611 RALGAPBQ86X10 1494 aa8.84□□□□□ -0.99
MACF1-228ENST00000528611 ADAMTS13Q76LX8 1427 aa8.83□□□□□ -1
MACF1-228ENST00000528611 PIP4P2Q8N4L2 257 aa8.83□□□□□ -1
MACF1-228ENST00000528611 ABCC11Q96J66 1382 aa8.83□□□□□ -1
MACF1-228ENST00000528611 ALKQ9UM73 1620 aa8.83□□□□□ -1
MACF1-228ENST00000528611 IQGAP1P46940 1657 aa8.82□□□□□ -1
MACF1-228ENST00000528611 TECPR2O15040 1411 aa8.82□□□□□ -1
MACF1-228ENST00000528611 NCOA3Q9Y6Q9 1424 aa8.82□□□□□ -1
MACF1-228ENST00000528611 REM2Q8IYK8 340 aaPredicted RBP8.82□□□□□ -1
MACF1-228ENST00000528611 KDM2AQ9Y2K7 1162 aa8.82□□□□□ -1
MACF1-228ENST00000528611 ZBTB12Q9Y330 459 aaPredicted RBP8.82□□□□□ -1
MACF1-228ENST00000528611 TRPM1Q7Z4N2 1603 aa8.81□□□□□ -1
MACF1-228ENST00000528611 EIF3AQ14152 1382 aaKnown RBP8.81□□□□□ -1
MACF1-228ENST00000528611 FAM135BQ49AJ0 1406 aa8.8□□□□□ -1
MACF1-228ENST00000528611 DLC1Q96QB1 1528 aa8.8□□□□□ -1
MACF1-228ENST00000528611 NRXN3Q9Y4C0 1643 aa8.8□□□□□ -1
MACF1-228ENST00000528611 NBPF8Q3BBV2 869 aa8.8□□□□□ -1
MACF1-228ENST00000528611 ROCK2O75116 1388 aaKnown RBP8.8□□□□□ -1
MACF1-228ENST00000528611 LRPPRCP42704 1394 aaKnown RBP8.8□□□□□ -1
MACF1-228ENST00000528611 SBNO2Q9Y2G9 1366 aa8.8□□□□□ -1
MACF1-228ENST00000528611 ADGRB1O14514 1584 aa8.8□□□□□ -1
MACF1-228ENST00000528611 STRCQ7RTU9 1775 aa8.8□□□□□ -1
MACF1-228ENST00000528611 NKTRP30414 1462 aaKnown RBP8.79□□□□□ -1
MACF1-228ENST00000528611 KCNA6P17658 529 aa8.79□□□□□ -1
MACF1-228ENST00000528611 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
MACF1-228ENST00000528611 PUS7Q96PZ0 661 aaKnown RBP8.79□□□□□ -1
MACF1-228ENST00000528611 SETD1AO15047 1707 aaKnown RBP8.79□□□□□ -1
MACF1-228ENST00000528611 PTCH1Q13635 1447 aa8.79□□□□□ -1
MACF1-228ENST00000528611 KNDC1Q76NI1 1749 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms