RNA–Protein interactions for RNA: ENST00000526845.1

TRIM3-204, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 658 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-204ENST00000526845 HRO43593 1189 aa6.79□□□□□ -1.32
TRIM3-204ENST00000526845 SSTR3P32745 418 aaPredicted RBP6.79□□□□□ -1.32
TRIM3-204ENST00000526845 TMUB1Q9BVT8 246 aa6.79□□□□□ -1.32
TRIM3-204ENST00000526845 RABGEF1Q9UJ41 708 aa6.79□□□□□ -1.32
TRIM3-204ENST00000526845 ATP1B4Q9UN42 357 aaPredicted RBP6.79□□□□□ -1.32
TRIM3-204ENST00000526845 NBPF26B4DH59 902 aa6.78□□□□□ -1.32
TRIM3-204ENST00000526845 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
TRIM3-204ENST00000526845 MDM2Q00987 491 aaPredicted RBP6.78□□□□□ -1.32
TRIM3-204ENST00000526845 DIXDC1Q155Q3 683 aa6.78□□□□□ -1.32
TRIM3-204ENST00000526845 NUDT18Q6ZVK8 323 aa6.78□□□□□ -1.32
TRIM3-204ENST00000526845 PNMA3Q9UL41 463 aa6.78□□□□□ -1.32
TRIM3-204ENST00000526845 ADGRG1Q9Y653 693 aa6.78□□□□□ -1.32
TRIM3-204ENST00000526845 BHMG1C9JSJ3 638 aaPredicted RBP6.77□□□□□ -1.33
TRIM3-204ENST00000526845 ONECUT3O60422 494 aaPredicted RBP6.77□□□□□ -1.33
TRIM3-204ENST00000526845 PACS2Q86VP3 889 aa6.77□□□□□ -1.33
TRIM3-204ENST00000526845 REPIN1Q9BWE0 567 aaKnown RBP6.77□□□□□ -1.33
TRIM3-204ENST00000526845 NBPF3Q9H094 633 aa6.77□□□□□ -1.33
TRIM3-204ENST00000526845 APBB1O00213 710 aa6.76□□□□□ -1.33
TRIM3-204ENST00000526845 MRPL50Q8N5N7 158 aaKnown RBP6.76□□□□□ -1.33
TRIM3-204ENST00000526845 NLRP7Q8WX94 980 aa6.76□□□□□ -1.33
TRIM3-204ENST00000526845 TATDN2Q93075 761 aa6.76□□□□□ -1.33
TRIM3-204ENST00000526845 BEGAINQ9BUH8 593 aa6.76□□□□□ -1.33
TRIM3-204ENST00000526845 PLA2G2EQ9NZK7 142 aa6.76□□□□□ -1.33
TRIM3-204ENST00000526845 RAD21O60216 631 aa6.75□□□□□ -1.33
TRIM3-204ENST00000526845 METTL3Q86U44 580 aaKnown RBP6.75□□□□□ -1.33
TRIM3-204ENST00000526845 ARID3AQ99856 593 aa6.75□□□□□ -1.33
TRIM3-204ENST00000526845 FAM217BQ9NTX9 383 aaPredicted RBP6.75□□□□□ -1.33
TRIM3-204ENST00000526845 STAC3Q96MF2 364 aa6.74□□□□□ -1.33
TRIM3-204ENST00000526845 TRAK2O60296 914 aa6.73□□□□□ -1.33
TRIM3-204ENST00000526845 MCM6Q14566 821 aa6.73□□□□□ -1.33
TRIM3-204ENST00000526845 FAM98CQ17RN3 349 aaKnown RBP6.73□□□□□ -1.33
TRIM3-204ENST00000526845 RBM46Q8TBY0 533 aaKnown RBP6.73□□□□□ -1.33
TRIM3-204ENST00000526845 PXYLP1Q8TE99 480 aa6.73□□□□□ -1.33
TRIM3-204ENST00000526845 PHOX2BQ99453 314 aa6.73□□□□□ -1.33
TRIM3-204ENST00000526845 EYA1Q99502 592 aa6.73□□□□□ -1.33
TRIM3-204ENST00000526845 KCTD12Q96CX2 325 aaKnown RBP6.72□□□□□ -1.33
TRIM3-204ENST00000526845 ZFRQ96KR1 1074 aaKnown RBP6.72□□□□□ -1.33
TRIM3-204ENST00000526845 RCCD1A6NED2 376 aa6.71□□□□□ -1.34
TRIM3-204ENST00000526845 ARID3CA6NKF2 412 aa6.71□□□□□ -1.34
TRIM3-204ENST00000526845 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
TRIM3-204ENST00000526845 LAPTM4BQ86VI4 370 aa6.71□□□□□ -1.34
TRIM3-204ENST00000526845 WNT2BQ93097 391 aa6.71□□□□□ -1.34
TRIM3-204ENST00000526845 C1orf115Q9H7X2 142 aa6.71□□□□□ -1.34
TRIM3-204ENST00000526845 RNF40O75150 1001 aa6.7□□□□□ -1.34
TRIM3-204ENST00000526845 CLK2P49760 499 aaKnown RBP6.7□□□□□ -1.34
TRIM3-204ENST00000526845 BCAMP50895 628 aa6.7□□□□□ -1.34
TRIM3-204ENST00000526845 SAMD7Q7Z3H4 446 aa6.7□□□□□ -1.34
TRIM3-204ENST00000526845 BANK1Q8NDB2 785 aa6.7□□□□□ -1.34
TRIM3-204ENST00000526845 CLUAP1Q96AJ1 413 aa6.7□□□□□ -1.34
TRIM3-204ENST00000526845 POLR3EQ9NVU0 708 aa6.7□□□□□ -1.34
TRIM3-204ENST00000526845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.69□□□□□ -1.34
TRIM3-204ENST00000526845 SPDYE5A6NIY4 337 aa6.69□□□□□ -1.34
TRIM3-204ENST00000526845 DNAJB2P25686 324 aa6.69□□□□□ -1.34
TRIM3-204ENST00000526845 SWT1Q5T5J6 900 aaKnown RBP6.69□□□□□ -1.34
TRIM3-204ENST00000526845 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
TRIM3-204ENST00000526845 PROSER2Q86WR7 435 aaPredicted RBP6.69□□□□□ -1.34
TRIM3-204ENST00000526845 ANKK1Q8NFD2 765 aa6.69□□□□□ -1.34
TRIM3-204ENST00000526845 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
TRIM3-204ENST00000526845 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
TRIM3-204ENST00000526845 TMEM259Q4ZIN3 620 aa6.68□□□□□ -1.34
TRIM3-204ENST00000526845 SULF1Q8IWU6 871 aa6.68□□□□□ -1.34
TRIM3-204ENST00000526845 PROCA1Q8NCQ7 364 aaPredicted RBP6.68□□□□□ -1.34
TRIM3-204ENST00000526845 TMEM134Q9H6X4 195 aa6.68□□□□□ -1.34
TRIM3-204ENST00000526845 THSD4Q6ZMP0 1018 aa6.67□□□□□ -1.34
TRIM3-204ENST00000526845 WWC1Q8IX03 1113 aa6.67□□□□□ -1.34
TRIM3-204ENST00000526845 LRCH3Q96II8 777 aa6.67□□□□□ -1.34
TRIM3-204ENST00000526845 TBC1D2Q9BYX2 928 aa6.67□□□□□ -1.34
TRIM3-204ENST00000526845 PRM3Q9NNZ6 103 aa6.67□□□□□ -1.34
TRIM3-204ENST00000526845 PDIA4P13667 645 aaKnown RBP6.66□□□□□ -1.34
TRIM3-204ENST00000526845 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.66□□□□□ -1.34
TRIM3-204ENST00000526845 SERPINA10Q9UK55 444 aa6.66□□□□□ -1.34
TRIM3-204ENST00000526845 SOWAHBA6NEL2 793 aa6.65□□□□□ -1.34
TRIM3-204ENST00000526845 TUSC1Q2TAM9 212 aa6.65□□□□□ -1.34
TRIM3-204ENST00000526845 CCDC82Q8N4S0 544 aa6.65□□□□□ -1.34
TRIM3-204ENST00000526845 CCDC97Q96F63 343 aaPredicted RBP6.65□□□□□ -1.34
TRIM3-204ENST00000526845 HPS5Q9UPZ3 1129 aa6.65□□□□□ -1.34
TRIM3-204ENST00000526845 RFC5P40937 340 aa6.64□□□□□ -1.35
TRIM3-204ENST00000526845 PTPN5P54829 565 aa6.64□□□□□ -1.35
TRIM3-204ENST00000526845 PPP2R2DQ66LE6 453 aa6.64□□□□□ -1.35
TRIM3-204ENST00000526845 RIC3Q7Z5B4 369 aa6.64□□□□□ -1.35
TRIM3-204ENST00000526845 NUTM1Q86Y26 1132 aa6.64□□□□□ -1.35
TRIM3-204ENST00000526845 GJA5P36382 358 aa6.63□□□□□ -1.35
TRIM3-204ENST00000526845 FNBP4Q8N3X1 1017 aaPredicted RBP6.63□□□□□ -1.35
TRIM3-204ENST00000526845 IRX2Q9BZI1 471 aaPredicted RBP6.63□□□□□ -1.35
TRIM3-204ENST00000526845 WBP1LQ9NX94 342 aa6.63□□□□□ -1.35
TRIM3-204ENST00000526845 ZNF777Q9ULD5 760 aaPredicted RBP6.63□□□□□ -1.35
TRIM3-204ENST00000526845 ZBTB7CA1YPR0 619 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 SOCS7O14512 581 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 RGS20O76081 388 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 CD46P15529 392 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 RSPH4AQ5TD94 716 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 SPIRE2Q8WWL2 714 aa6.62□□□□□ -1.35
TRIM3-204ENST00000526845 SPTLC1O15269 473 aa6.61□□□□□ -1.35
TRIM3-204ENST00000526845 HDGFP51858 240 aaKnown RBP6.61□□□□□ -1.35
TRIM3-204ENST00000526845 SLF2Q8IX21 1173 aa6.61□□□□□ -1.35
TRIM3-204ENST00000526845 COG6Q9Y2V7 657 aa6.61□□□□□ -1.35
TRIM3-204ENST00000526845 SLC10A3P09131 477 aa6.6□□□□□ -1.35
TRIM3-204ENST00000526845 TRIM26Q12899 539 aaPredicted RBP6.6□□□□□ -1.35
TRIM3-204ENST00000526845 RDH13Q8NBN7 331 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms