RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
SSRP1-203ENST00000526696 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
SSRP1-203ENST00000526696 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
SSRP1-203ENST00000526696 DUOX2Q9NRD8 1548 aa21.86■■□□□ 1.09
SSRP1-203ENST00000526696 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
SSRP1-203ENST00000526696 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.84■■□□□ 1.09
SSRP1-203ENST00000526696 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
SSRP1-203ENST00000526696 NCOA3Q9Y6Q9 1424 aa21.81■■□□□ 1.08
SSRP1-203ENST00000526696 RBM6P78332 1123 aaKnown RBP21.8■■□□□ 1.08
SSRP1-203ENST00000526696 NUTM2DQ5VT03 806 aaPredicted RBP21.8■■□□□ 1.08
SSRP1-203ENST00000526696 BCANQ96GW7 911 aa21.8■■□□□ 1.08
SSRP1-203ENST00000526696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.081e-6■■□□□ 13.6
SSRP1-203ENST00000526696 BRINP3Q76B58 766 aa21.79■■□□□ 1.08
SSRP1-203ENST00000526696 QTRT2Q9H974 415 aaKnown RBP21.79■■□□□ 1.08
SSRP1-203ENST00000526696 ZFYVE9O95405 1425 aa21.79■■□□□ 1.08
SSRP1-203ENST00000526696 NOS1P29475 1434 aa21.79■■□□□ 1.08
SSRP1-203ENST00000526696 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
SSRP1-203ENST00000526696 KIF15Q9NS87 1388 aa21.77■■□□□ 1.08
SSRP1-203ENST00000526696 PLEKHG1Q9ULL1 1385 aa21.77■■□□□ 1.08
SSRP1-203ENST00000526696 CADPS2Q86UW7 1296 aa21.77■■□□□ 1.08
SSRP1-203ENST00000526696 EP400Q96L91 3159 aa21.77■■□□□ 1.07
SSRP1-203ENST00000526696 ERBINQ96RT1 1412 aa21.76■■□□□ 1.07
SSRP1-203ENST00000526696 ZRANB1Q9UGI0 708 aa21.76■■□□□ 1.07
SSRP1-203ENST00000526696 LMTK2Q8IWU2 1503 aa21.75■■□□□ 1.07
SSRP1-203ENST00000526696 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
SSRP1-203ENST00000526696 C19orf44Q9H6X5 657 aa21.75■■□□□ 1.07
SSRP1-203ENST00000526696 SETD5Q9C0A6 1442 aa21.74■■□□□ 1.07
SSRP1-203ENST00000526696 C8orf37Q96NL8 207 aa21.74■■□□□ 1.07
SSRP1-203ENST00000526696 ATF3P18847 181 aa21.73■■□□□ 1.07
SSRP1-203ENST00000526696 ATAD2Q6PL18 1390 aa21.72■■□□□ 1.07
SSRP1-203ENST00000526696 RRP7BPQ9NSQ0 103 aa21.71■■□□□ 1.07
SSRP1-203ENST00000526696 TBX22Q9Y458 520 aa21.71■■□□□ 1.07
SSRP1-203ENST00000526696 ASXL1Q8IXJ9 1541 aa21.7■■□□□ 1.07
SSRP1-203ENST00000526696 ADAMTS13Q76LX8 1427 aa21.7■■□□□ 1.06
SSRP1-203ENST00000526696 RIMS2Q9UQ26 1411 aa21.7■■□□□ 1.06
SSRP1-203ENST00000526696 NHSL1Q5SYE7 1610 aa21.69■■□□□ 1.06
SSRP1-203ENST00000526696 KANK1Q14678 1352 aa21.69■■□□□ 1.06
SSRP1-203ENST00000526696 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
SSRP1-203ENST00000526696 PNPLA6Q8IY17 1366 aa21.67■■□□□ 1.06
SSRP1-203ENST00000526696 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
SSRP1-203ENST00000526696 ABCC5O15440 1437 aa21.66■■□□□ 1.06
SSRP1-203ENST00000526696 CROCC2H7BZ55 1655 aa21.66■■□□□ 1.06
SSRP1-203ENST00000526696 PPP1R15AO75807 674 aaPredicted RBP21.65■■□□□ 1.06
SSRP1-203ENST00000526696 DDX17Q92841 729 aaKnown RBP21.65■■□□□ 1.06
SSRP1-203ENST00000526696 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
SSRP1-203ENST00000526696 TMEM131LA2VDJ0 1609 aa21.64■■□□□ 1.05
SSRP1-203ENST00000526696 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
SSRP1-203ENST00000526696 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
SSRP1-203ENST00000526696 NGLY1Q96IV0 654 aa21.63■■□□□ 1.05
SSRP1-203ENST00000526696 MST1RQ04912 1400 aa21.63■■□□□ 1.05
SSRP1-203ENST00000526696 FOXD1Q16676 465 aa21.61■■□□□ 1.05
SSRP1-203ENST00000526696 DCCP43146 1447 aa21.61■■□□□ 1.05
SSRP1-203ENST00000526696 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
SSRP1-203ENST00000526696 ADAMTS2O95450 1211 aa21.6■■□□□ 1.05
SSRP1-203ENST00000526696 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
SSRP1-203ENST00000526696 AMOTL2Q9Y2J4 779 aa21.58■■□□□ 1.05
SSRP1-203ENST00000526696 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
SSRP1-203ENST00000526696 USP21Q9UK80 565 aa21.56■■□□□ 1.04
SSRP1-203ENST00000526696 ATRNO75882 1429 aa21.55■■□□□ 1.04
SSRP1-203ENST00000526696 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
SSRP1-203ENST00000526696 TRPM2O94759 1503 aa21.54■■□□□ 1.04
SSRP1-203ENST00000526696 DAPK1P53355 1430 aa21.54■■□□□ 1.04
SSRP1-203ENST00000526696 RPRD2Q5VT52 1461 aaKnown RBP21.53■■□□□ 1.04
SSRP1-203ENST00000526696 CCDC125Q86Z20 511 aa21.53■■□□□ 1.04
SSRP1-203ENST00000526696 XRN1Q8IZH2 1706 aaKnown RBP21.52■■□□□ 1.04
SSRP1-203ENST00000526696 FNBP4Q8N3X1 1017 aaPredicted RBP21.52■■□□□ 1.04
SSRP1-203ENST00000526696 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.52■■□□□ 1.04
SSRP1-203ENST00000526696 LRP5O75197 1615 aa21.51■■□□□ 1.03
SSRP1-203ENST00000526696 CHIC2Q9UKJ5 165 aa21.49■■□□□ 1.03
SSRP1-203ENST00000526696 UNC13BO14795 1591 aa21.48■■□□□ 1.03
SSRP1-203ENST00000526696 PTPN23Q9H3S7 1636 aa21.48■■□□□ 1.03
SSRP1-203ENST00000526696 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
SSRP1-203ENST00000526696 LAMC1P11047 1609 aa21.47■■□□□ 1.03
SSRP1-203ENST00000526696 NRXN3Q9Y4C0 1643 aa21.47■■□□□ 1.03
SSRP1-203ENST00000526696 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
SSRP1-203ENST00000526696 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
SSRP1-203ENST00000526696 DEFB132Q7Z7B7 95 aa21.44■■□□□ 1.02
SSRP1-203ENST00000526696 ADGRL3Q9HAR2 1447 aa21.44■■□□□ 1.02
SSRP1-203ENST00000526696 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
SSRP1-203ENST00000526696 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
SSRP1-203ENST00000526696 BLMP54132 1417 aaPredicted RBP21.42■■□□□ 1.02
SSRP1-203ENST00000526696 SOS2Q07890 1332 aaPredicted RBP21.42■■□□□ 1.02
SSRP1-203ENST00000526696 C1orf167Q5SNV9 1468 aa21.41■■□□□ 1.02
SSRP1-203ENST00000526696 COL22A1Q8NFW1 1626 aaPredicted RBP21.4■■□□□ 1.02
SSRP1-203ENST00000526696 VPS8Q8N3P4 1428 aa21.39■■□□□ 1.02
SSRP1-203ENST00000526696 METP08581 1390 aa21.39■■□□□ 1.02
SSRP1-203ENST00000526696 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
SSRP1-203ENST00000526696 GJD4Q96KN9 370 aaPredicted RBP21.37■■□□□ 1.01
SSRP1-203ENST00000526696 ORAI2Q96SN7 254 aa21.37■■□□□ 1.01
SSRP1-203ENST00000526696 MYOM2P54296 1465 aa21.37■■□□□ 1.01
SSRP1-203ENST00000526696 E9PCH4 1651 aa21.37■■□□□ 1.01
SSRP1-203ENST00000526696 MARF1Q9Y4F3 1742 aaKnown RBP21.35■■□□□ 1.01
SSRP1-203ENST00000526696 ADGRL2O95490 1459 aa21.35■■□□□ 1.01
SSRP1-203ENST00000526696 GLI3P10071 1580 aa21.35■■□□□ 1.01
SSRP1-203ENST00000526696 ANKRD50Q9ULJ7 1429 aa21.33■■□□□ 1.01
SSRP1-203ENST00000526696 PSDA5PKW4 1024 aaPredicted RBP21.32■■□□□ 1
SSRP1-203ENST00000526696 HRCP23327 699 aa21.31■■□□□ 1
SSRP1-203ENST00000526696 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
SSRP1-203ENST00000526696 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.3■■□□□ 1
SSRP1-203ENST00000526696 SPHKAPQ2M3C7 1700 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms