RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CDCA7LQ96GN5 454 aa27.22■■□□□ 1.95
SMIM3-201ENST00000526627 MYOM1P52179 1685 aa27.21■■□□□ 1.95
SMIM3-201ENST00000526627 AMER1Q5JTC6 1135 aaPredicted RBP27.21■■□□□ 1.95
SMIM3-201ENST00000526627 EFCAB6Q5THR3 1501 aa27.19■■□□□ 1.94
SMIM3-201ENST00000526627 MYOM2P54296 1465 aa27.19■■□□□ 1.94
SMIM3-201ENST00000526627 MAP3K4Q9Y6R4 1608 aa27.18■■□□□ 1.94
SMIM3-201ENST00000526627 CDCA8Q53HL2 280 aa27.18■■□□□ 1.94
SMIM3-201ENST00000526627 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
SMIM3-201ENST00000526627 KNSTRNQ9Y448 316 aa27.17■■□□□ 1.94
SMIM3-201ENST00000526627 ABCA6Q8N139 1617 aa27.17■■□□□ 1.94
SMIM3-201ENST00000526627 PPRC1Q5VV67 1664 aaKnown RBP27.16■■□□□ 1.94
SMIM3-201ENST00000526627 PPP2R1AP30153 589 aa27.16■■□□□ 1.94
SMIM3-201ENST00000526627 IFT172Q9UG01 1749 aa27.16■■□□□ 1.94
SMIM3-201ENST00000526627 EIF3AQ14152 1382 aaKnown RBP27.14■■□□□ 1.94
SMIM3-201ENST00000526627 ASXL1Q8IXJ9 1541 aa27.14■■□□□ 1.94
SMIM3-201ENST00000526627 KIF1BO60333 1816 aa27.14■■□□□ 1.94
SMIM3-201ENST00000526627 EXOC6Q8TAG9 804 aa27.14■■□□□ 1.94
SMIM3-201ENST00000526627 LMTK2Q8IWU2 1503 aa27.14■■□□□ 1.93
SMIM3-201ENST00000526627 ADAMTS8Q9UP79 889 aa27.13■■□□□ 1.93
SMIM3-201ENST00000526627 MROH2AA6NES4 1674 aa27.13■■□□□ 1.93
SMIM3-201ENST00000526627 ADGRF5Q8IZF2 1346 aa27.13■■□□□ 1.93
SMIM3-201ENST00000526627 CFAP70Q5T0N1 1121 aa27.12■■□□□ 1.93
SMIM3-201ENST00000526627 ZNF518AQ6AHZ1 1483 aa27.11■■□□□ 1.93
SMIM3-201ENST00000526627 KDM5AP29375 1690 aaKnown RBP27.11■■□□□ 1.93
SMIM3-201ENST00000526627 NPC1L1Q9UHC9 1359 aa27.1■■□□□ 1.93
SMIM3-201ENST00000526627 NRXN1Q9ULB1 1477 aa27.1■■□□□ 1.93
SMIM3-201ENST00000526627 ERVK-7P63135 1459 aa27.08■■□□□ 1.93
SMIM3-201ENST00000526627 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
SMIM3-201ENST00000526627 ADGRB3O60242 1522 aa27.04■■□□□ 1.92
SMIM3-201ENST00000526627 FRMPD1Q5SYB0 1578 aa27.04■■□□□ 1.92
SMIM3-201ENST00000526627 PLEKHH1Q9ULM0 1364 aa27.03■■□□□ 1.92
SMIM3-201ENST00000526627 MYO3AQ8NEV4 1616 aa27.03■■□□□ 1.92
SMIM3-201ENST00000526627 POGZQ7Z3K3 1410 aa27.02■■□□□ 1.92
SMIM3-201ENST00000526627 WDR43Q15061 677 aaKnown RBP eCLIP27■■□□□ 1.91
SMIM3-201ENST00000526627 ZNF521Q96K83 1311 aa27■■□□□ 1.91
SMIM3-201ENST00000526627 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
SMIM3-201ENST00000526627 CD109Q6YHK3 1445 aa26.99■■□□□ 1.91
SMIM3-201ENST00000526627 CFAP74Q9C0B2 1584 aa26.99■■□□□ 1.91
SMIM3-201ENST00000526627 NOS1P29475 1434 aa26.99■■□□□ 1.91
SMIM3-201ENST00000526627 NPATQ14207 1427 aa26.99■■□□□ 1.91
SMIM3-201ENST00000526627 PLIN1O60240 522 aa26.99■■□□□ 1.91
SMIM3-201ENST00000526627 SLC24A1O60721 1099 aa26.98■■□□□ 1.91
SMIM3-201ENST00000526627 SETBP1Q9Y6X0 1596 aa26.97■■□□□ 1.91
SMIM3-201ENST00000526627 SBNO2Q9Y2G9 1366 aa26.97■■□□□ 1.91
SMIM3-201ENST00000526627 CARD14Q9BXL6 1004 aa26.96■■□□□ 1.91
SMIM3-201ENST00000526627 NPM1P06748 294 aaKnown RBP eCLIP26.95■■□□□ 1.91
SMIM3-201ENST00000526627 HECW2Q9P2P5 1572 aa26.95■■□□□ 1.9
SMIM3-201ENST00000526627 ERICH6Q7L0X2 663 aa26.95■■□□□ 1.9
SMIM3-201ENST00000526627 DUSP27Q5VZP5 1158 aa26.94■■□□□ 1.9
SMIM3-201ENST00000526627 PPLO60437 1756 aa26.94■■□□□ 1.9
SMIM3-201ENST00000526627 CRBNQ96SW2 442 aa26.91■■□□□ 1.9
SMIM3-201ENST00000526627 CFAP65Q6ZU64 1925 aaKnown RBP26.91■■□□□ 1.9
SMIM3-201ENST00000526627 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
SMIM3-201ENST00000526627 ABCC3O15438 1527 aa26.89■■□□□ 1.9
SMIM3-201ENST00000526627 ADGRB1O14514 1584 aa26.89■■□□□ 1.9
SMIM3-201ENST00000526627 GGT6Q6P531 493 aa26.89■■□□□ 1.89
SMIM3-201ENST00000526627 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.89
SMIM3-201ENST00000526627 C14orf93Q9H972 538 aaKnown RBP26.88■■□□□ 1.89
SMIM3-201ENST00000526627 CHGAP10645 457 aaKnown RBP26.88■■□□□ 1.89
SMIM3-201ENST00000526627 CENPJQ9HC77 1338 aaPredicted RBP26.88■■□□□ 1.89
SMIM3-201ENST00000526627 TCERG1O14776 1098 aaKnown RBP26.87■■□□□ 1.89
SMIM3-201ENST00000526627 GOLGA2Q08379 1002 aa26.87■■□□□ 1.89
SMIM3-201ENST00000526627 C20orf194Q5TEA3 1177 aa26.87■■□□□ 1.89
SMIM3-201ENST00000526627 CCDC146Q8IYE0 955 aa26.85■■□□□ 1.89
SMIM3-201ENST00000526627 SLFN5Q08AF3 891 aa26.84■■□□□ 1.89
SMIM3-201ENST00000526627 NOP58Q9Y2X3 529 aaKnown RBP26.84■■□□□ 1.89
SMIM3-201ENST00000526627 TRMT2AQ8IZ69 625 aaKnown RBP26.84■■□□□ 1.89
SMIM3-201ENST00000526627 SIGLEC1Q9BZZ2 1709 aa26.84■■□□□ 1.89
SMIM3-201ENST00000526627 QRICH2Q9H0J4 1663 aa26.83■■□□□ 1.89
SMIM3-201ENST00000526627 CAMSAP1Q5T5Y3 1602 aa26.83■■□□□ 1.89
SMIM3-201ENST00000526627 TRAK1Q9UPV9 953 aa26.83■■□□□ 1.89
SMIM3-201ENST00000526627 PAK3O75914 559 aaPredicted RBP26.82■■□□□ 1.88
SMIM3-201ENST00000526627 RPGRIP1LQ68CZ1 1315 aa26.81■■□□□ 1.88
SMIM3-201ENST00000526627 APAF1O14727 1248 aa26.8■■□□□ 1.88
SMIM3-201ENST00000526627 NEO1Q92859 1461 aa26.8■■□□□ 1.88
SMIM3-201ENST00000526627 ANP32AP39687 249 aaKnown RBP26.79■■□□□ 1.88
SMIM3-201ENST00000526627 PIK3C2BO00750 1634 aa26.79■■□□□ 1.88
SMIM3-201ENST00000526627 IPO9Q96P70 1041 aaKnown RBP26.79■■□□□ 1.88
SMIM3-201ENST00000526627 MS4A1P11836 297 aa26.78■■□□□ 1.88
SMIM3-201ENST00000526627 SPINK5Q9NQ38 1064 aaPredicted RBP26.78■■□□□ 1.88
SMIM3-201ENST00000526627 TMEM132EQ6IEE7 984 aa26.78■■□□□ 1.88
SMIM3-201ENST00000526627 POLR3AO14802 1390 aaPredicted RBP26.77■■□□□ 1.88
SMIM3-201ENST00000526627 RAPGEF3O95398 923 aa26.77■■□□□ 1.88
SMIM3-201ENST00000526627 NSD3Q9BZ95 1437 aa26.77■■□□□ 1.88
SMIM3-201ENST00000526627 DIP2CQ9Y2E4 1556 aa26.76■■□□□ 1.88
SMIM3-201ENST00000526627 PDE4AP27815 886 aa26.76■■□□□ 1.87
SMIM3-201ENST00000526627 SLC12A5Q9H2X9 1139 aa26.74■■□□□ 1.87
SMIM3-201ENST00000526627 BACH2Q9BYV9 841 aa26.74■■□□□ 1.87
SMIM3-201ENST00000526627 NEXMIFQ5QGS0 1516 aa26.73■■□□□ 1.87
SMIM3-201ENST00000526627 KDM2BQ8NHM5 1336 aa26.73■■□□□ 1.87
SMIM3-201ENST00000526627 GLI2P10070 1586 aa26.72■■□□□ 1.87
SMIM3-201ENST00000526627 SHPRHQ149N8 1683 aa26.72■■□□□ 1.87
SMIM3-201ENST00000526627 NKTRP30414 1462 aaKnown RBP26.71■■□□□ 1.87
SMIM3-201ENST00000526627 USP32Q8NFA0 1604 aa26.71■■□□□ 1.87
SMIM3-201ENST00000526627 SKAP1Q86WV1 359 aa26.71■■□□□ 1.87
SMIM3-201ENST00000526627 DMRT2Q9Y5R5 561 aa26.71■■□□□ 1.87
SMIM3-201ENST00000526627 RICTORQ6R327 1708 aa26.7■■□□□ 1.86
SMIM3-201ENST00000526627 ARHGEF28Q8N1W1 1705 aaKnown RBP26.69■■□□□ 1.86
SMIM3-201ENST00000526627 ARHGAP31Q2M1Z3 1444 aa26.69■■□□□ 1.86
SMIM3-201ENST00000526627 NGEFQ8N5V2 710 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms