RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 INSM1Q01101 510 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-203ENST00000526335 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
C11orf54-203ENST00000526335 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
C11orf54-203ENST00000526335 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
C11orf54-203ENST00000526335 TLL1O43897 1013 aa12.84□□□□□ -0.35
C11orf54-203ENST00000526335 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
C11orf54-203ENST00000526335 DACH1Q9UI36 760 aa12.83□□□□□ -0.36
C11orf54-203ENST00000526335 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-203ENST00000526335 WIPF1O43516 503 aa12.82□□□□□ -0.36
C11orf54-203ENST00000526335 S1PR4O95977 384 aa12.82□□□□□ -0.36
C11orf54-203ENST00000526335 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
C11orf54-203ENST00000526335 PDIA6Q15084 440 aa12.82□□□□□ -0.36
C11orf54-203ENST00000526335 LOC100996750A0A140TA64 210 aa12.81□□□□□ -0.36
C11orf54-203ENST00000526335 NFX1Q12986 1120 aaKnown RBP12.81□□□□□ -0.36
C11orf54-203ENST00000526335 KRTAP4-6Q9BYQ5 205 aa12.81□□□□□ -0.36
C11orf54-203ENST00000526335 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
C11orf54-203ENST00000526335 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
C11orf54-203ENST00000526335 FOXC1Q12948 553 aa12.78□□□□□ -0.36
C11orf54-203ENST00000526335 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
C11orf54-203ENST00000526335 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
C11orf54-203ENST00000526335 GRXCR2A6NFK2 248 aa12.77□□□□□ -0.37
C11orf54-203ENST00000526335 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
C11orf54-203ENST00000526335 CRIPAKQ8N1N5 446 aa12.76□□□□□ -0.37
C11orf54-203ENST00000526335 AXIN1O15169 862 aa12.73□□□□□ -0.37
C11orf54-203ENST00000526335 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
C11orf54-203ENST00000526335 PLA2G2CQ5R387 149 aa12.71□□□□□ -0.37
C11orf54-203ENST00000526335 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
C11orf54-203ENST00000526335 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
C11orf54-203ENST00000526335 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
C11orf54-203ENST00000526335 AVPP01185 164 aa12.68□□□□□ -0.38
C11orf54-203ENST00000526335 ADH1BP00325 375 aa12.67□□□□□ -0.38
C11orf54-203ENST00000526335 SLC6A16Q9GZN6 736 aa12.66□□□□□ -0.38
C11orf54-203ENST00000526335 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
C11orf54-203ENST00000526335 LCE2CQ5TA81 110 aa12.65□□□□□ -0.38
C11orf54-203ENST00000526335 EYA1Q99502 592 aa12.65□□□□□ -0.38
C11orf54-203ENST00000526335 OSBPP22059 807 aa12.64□□□□□ -0.39
C11orf54-203ENST00000526335 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
C11orf54-203ENST00000526335 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
C11orf54-203ENST00000526335 TOR4AQ9NXH8 423 aa12.63□□□□□ -0.39
C11orf54-203ENST00000526335 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
C11orf54-203ENST00000526335 ACTN4O43707 911 aaKnown RBP12.61□□□□□ -0.39
C11orf54-203ENST00000526335 FAM181BA6NEQ2 426 aa12.6□□□□□ -0.39
C11orf54-203ENST00000526335 NPDC1Q9NQX5 325 aaPredicted RBP12.59□□□□□ -0.39
C11orf54-203ENST00000526335 NR1I2O75469 434 aa12.58□□□□□ -0.4
C11orf54-203ENST00000526335 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.4
C11orf54-203ENST00000526335 SNRPBP14678 240 aaKnown RBP12.57□□□□□ -0.4
C11orf54-203ENST00000526335 CFHP08603 1231 aa12.56□□□□□ -0.4
C11orf54-203ENST00000526335 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
C11orf54-203ENST00000526335 DNAJB2P25686 324 aa12.53□□□□□ -0.4
C11orf54-203ENST00000526335 RPIAP49247 311 aa12.53□□□□□ -0.4
C11orf54-203ENST00000526335 TTC24A2A3L6 582 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-203ENST00000526335 ATP13A2Q9NQ11 1180 aa12.52□□□□□ -0.41
C11orf54-203ENST00000526335 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
C11orf54-203ENST00000526335 SUZ12Q15022 739 aaKnown RBP12.48□□□□□ -0.41
C11orf54-203ENST00000526335 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
C11orf54-203ENST00000526335 SPSB2Q99619 263 aa12.48□□□□□ -0.41
C11orf54-203ENST00000526335 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
C11orf54-203ENST00000526335 SENP2Q9HC62 589 aa12.48□□□□□ -0.41
C11orf54-203ENST00000526335 E2F4Q16254 413 aa12.47□□□□□ -0.41
C11orf54-203ENST00000526335 ZSCAN1Q8NBB4 408 aa12.44□□□□□ -0.42
C11orf54-203ENST00000526335 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
C11orf54-203ENST00000526335 SLC16A10Q8TF71 515 aa12.43□□□□□ -0.42
C11orf54-203ENST00000526335 FCF1Q9Y324 198 aaKnown RBP12.43□□□□□ -0.42
C11orf54-203ENST00000526335 ARIH1Q9Y4X5 557 aaPredicted RBP12.43□□□□□ -0.42
C11orf54-203ENST00000526335 SLC10A3P09131 477 aa12.43□□□□□ -0.42
C11orf54-203ENST00000526335 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
C11orf54-203ENST00000526335 PUS10Q3MIT2 529 aaKnown RBP12.42□□□□□ -0.42
C11orf54-203ENST00000526335 RCCD1A6NED2 376 aa12.4□□□□□ -0.42
C11orf54-203ENST00000526335 SMPD1P17405 629 aa12.4□□□□□ -0.42
C11orf54-203ENST00000526335 GMPRP36959 345 aa12.39□□□□□ -0.43
C11orf54-203ENST00000526335 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
C11orf54-203ENST00000526335 LORP23490 312 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-203ENST00000526335 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
C11orf54-203ENST00000526335 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
C11orf54-203ENST00000526335 ZBTB24O43167 697 aaPredicted RBP12.34□□□□□ -0.43
C11orf54-203ENST00000526335 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
C11orf54-203ENST00000526335 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
C11orf54-203ENST00000526335 J3QL48 77 aa12.31□□□□□ -0.44
C11orf54-203ENST00000526335 WNT7AO00755 349 aa12.31□□□□□ -0.44
C11orf54-203ENST00000526335 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
C11orf54-203ENST00000526335 IRF7Q92985 503 aa12.3□□□□□ -0.44
C11orf54-203ENST00000526335 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-203ENST00000526335 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
C11orf54-203ENST00000526335 HPS1Q92902 700 aa12.29□□□□□ -0.44
C11orf54-203ENST00000526335 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
C11orf54-203ENST00000526335 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.45
C11orf54-203ENST00000526335 FAM160A2Q8N612 972 aaPredicted RBP12.27□□□□□ -0.45
C11orf54-203ENST00000526335 PTGDRQ13258 359 aa12.26□□□□□ -0.45
C11orf54-203ENST00000526335 MRGPRX2Q96LB1 330 aa12.26□□□□□ -0.45
C11orf54-203ENST00000526335 VEGFBP49765 207 aa12.25□□□□□ -0.45
C11orf54-203ENST00000526335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
C11orf54-203ENST00000526335 THAP11Q96EK4 314 aa12.24□□□□□ -0.45
C11orf54-203ENST00000526335 PRDM9Q9NQV7 894 aa12.24□□□□□ -0.45
C11orf54-203ENST00000526335 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
C11orf54-203ENST00000526335 MORN1Q5T089 497 aa12.21□□□□□ -0.45
C11orf54-203ENST00000526335 TRIM32Q13049 653 aa12.2□□□□□ -0.46
C11orf54-203ENST00000526335 NPAS3Q8IXF0 933 aa12.2□□□□□ -0.46
C11orf54-203ENST00000526335 KCTD17Q8N5Z5 321 aa12.2□□□□□ -0.46
C11orf54-203ENST00000526335 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
C11orf54-203ENST00000526335 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms