RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 TMF1P82094 1093 aa11.95□□□□□ -0.5
PKP3-202ENST00000524646 RGL3Q3MIN7 710 aa11.95□□□□□ -0.5
PKP3-202ENST00000524646 CCDC136Q96JN2 1154 aa11.95□□□□□ -0.5
PKP3-202ENST00000524646 LMTK2Q8IWU2 1503 aa11.95□□□□□ -0.5
PKP3-202ENST00000524646 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
PKP3-202ENST00000524646 ADGRB3O60242 1522 aa11.94□□□□□ -0.5
PKP3-202ENST00000524646 ADGRL1O94910 1474 aa11.94□□□□□ -0.5
PKP3-202ENST00000524646 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
PKP3-202ENST00000524646 KANK1Q14678 1352 aa11.93□□□□□ -0.5
PKP3-202ENST00000524646 PIK3C2GO75747 1445 aa11.93□□□□□ -0.5
PKP3-202ENST00000524646 HECW2Q9P2P5 1572 aa11.92□□□□□ -0.5
PKP3-202ENST00000524646 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
PKP3-202ENST00000524646 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
PKP3-202ENST00000524646 VIRMAQ69YN4 1812 aaKnown RBP11.91□□□□□ -0.5
PKP3-202ENST00000524646 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
PKP3-202ENST00000524646 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
PKP3-202ENST00000524646 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
PKP3-202ENST00000524646 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
PKP3-202ENST00000524646 NRXN1Q9ULB1 1477 aa11.9□□□□□ -0.5
PKP3-202ENST00000524646 NPC1L1Q9UHC9 1359 aa11.9□□□□□ -0.5
PKP3-202ENST00000524646 PANK3Q9H999 370 aa11.89□□□□□ -0.51
PKP3-202ENST00000524646 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
PKP3-202ENST00000524646 CAMSAP1Q5T5Y3 1602 aa11.88□□□□□ -0.51
PKP3-202ENST00000524646 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
PKP3-202ENST00000524646 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
PKP3-202ENST00000524646 CDCA8Q53HL2 280 aa11.87□□□□□ -0.51
PKP3-202ENST00000524646 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
PKP3-202ENST00000524646 FRMPD1Q5SYB0 1578 aa11.87□□□□□ -0.51
PKP3-202ENST00000524646 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
PKP3-202ENST00000524646 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
PKP3-202ENST00000524646 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
PKP3-202ENST00000524646 ARHGEF28Q8N1W1 1705 aaKnown RBP11.85□□□□□ -0.51
PKP3-202ENST00000524646 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
PKP3-202ENST00000524646 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
PKP3-202ENST00000524646 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
PKP3-202ENST00000524646 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
PKP3-202ENST00000524646 PIK3C2BO00750 1634 aa11.84□□□□□ -0.51
PKP3-202ENST00000524646 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
PKP3-202ENST00000524646 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
PKP3-202ENST00000524646 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
PKP3-202ENST00000524646 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
PKP3-202ENST00000524646 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
PKP3-202ENST00000524646 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
PKP3-202ENST00000524646 ABCC3O15438 1527 aa11.81□□□□□ -0.52
PKP3-202ENST00000524646 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
PKP3-202ENST00000524646 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
PKP3-202ENST00000524646 GLI2P10070 1586 aa11.81□□□□□ -0.52
PKP3-202ENST00000524646 KNSTRNQ9Y448 316 aa11.81□□□□□ -0.52
PKP3-202ENST00000524646 CFAP65Q6ZU64 1925 aaKnown RBP11.81□□□□□ -0.52
PKP3-202ENST00000524646 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
PKP3-202ENST00000524646 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
PKP3-202ENST00000524646 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
PKP3-202ENST00000524646 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
PKP3-202ENST00000524646 MS4A1P11836 297 aa11.79□□□□□ -0.52
PKP3-202ENST00000524646 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
PKP3-202ENST00000524646 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
PKP3-202ENST00000524646 RICTORQ6R327 1708 aa11.78□□□□□ -0.52
PKP3-202ENST00000524646 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
PKP3-202ENST00000524646 IPO9Q96P70 1041 aaKnown RBP11.78□□□□□ -0.52
PKP3-202ENST00000524646 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
PKP3-202ENST00000524646 NOS1P29475 1434 aa11.77□□□□□ -0.52
PKP3-202ENST00000524646 MYO5BQ9ULV0 1848 aa11.77□□□□□ -0.52
PKP3-202ENST00000524646 KIF3BO15066 747 aa11.77□□□□□ -0.53
PKP3-202ENST00000524646 IQSEC2Q5JU85 1478 aa11.76□□□□□ -0.53
PKP3-202ENST00000524646 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
PKP3-202ENST00000524646 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
PKP3-202ENST00000524646 NPATQ14207 1427 aa11.76□□□□□ -0.53
PKP3-202ENST00000524646 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
PKP3-202ENST00000524646 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
PKP3-202ENST00000524646 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
PKP3-202ENST00000524646 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
PKP3-202ENST00000524646 ADGRF5Q8IZF2 1346 aa11.74□□□□□ -0.53
PKP3-202ENST00000524646 ADGRB2O60241 1585 aa11.74□□□□□ -0.53
PKP3-202ENST00000524646 PREX1Q8TCU6 1659 aa11.74□□□□□ -0.53
PKP3-202ENST00000524646 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
PKP3-202ENST00000524646 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
PKP3-202ENST00000524646 NEO1Q92859 1461 aa11.73□□□□□ -0.53
PKP3-202ENST00000524646 TULP4Q9NRJ4 1543 aa11.73□□□□□ -0.53
PKP3-202ENST00000524646 NINLQ9Y2I6 1382 aa11.73□□□□□ -0.53
PKP3-202ENST00000524646 NSD3Q9BZ95 1437 aa11.72□□□□□ -0.53
PKP3-202ENST00000524646 KDM2BQ8NHM5 1336 aa11.72□□□□□ -0.53
PKP3-202ENST00000524646 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
PKP3-202ENST00000524646 BCL11AQ9H165 835 aa11.72□□□□□ -0.53
PKP3-202ENST00000524646 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
PKP3-202ENST00000524646 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
PKP3-202ENST00000524646 PLIN1O60240 522 aa11.71□□□□□ -0.53
PKP3-202ENST00000524646 PDE4AP27815 886 aa11.71□□□□□ -0.53
PKP3-202ENST00000524646 CFAP70Q5T0N1 1121 aa11.71□□□□□ -0.53
PKP3-202ENST00000524646 NGEFQ8N5V2 710 aa11.71□□□□□ -0.53
PKP3-202ENST00000524646 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.71□□□□□ -0.53
PKP3-202ENST00000524646 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
PKP3-202ENST00000524646 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
PKP3-202ENST00000524646 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
PKP3-202ENST00000524646 CD109Q6YHK3 1445 aa11.69□□□□□ -0.54
PKP3-202ENST00000524646 CENPQQ7L2Z9 268 aaPredicted RBP11.69□□□□□ -0.54
PKP3-202ENST00000524646 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
PKP3-202ENST00000524646 NSD2O96028 1365 aa11.67□□□□□ -0.54
PKP3-202ENST00000524646 RPGRIP1LQ68CZ1 1315 aa11.67□□□□□ -0.54
PKP3-202ENST00000524646 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
PKP3-202ENST00000524646 ARHGAP31Q2M1Z3 1444 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms