RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 EFCAB6Q5THR3 1501 aa10.42□□□□□ -0.74
VPS11-201ENST00000524454 UBR1Q8IWV7 1749 aa10.41□□□□□ -0.74
VPS11-201ENST00000524454 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
VPS11-201ENST00000524454 DHX57Q6P158 1386 aaKnown RBP10.41□□□□□ -0.74
VPS11-201ENST00000524454 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
VPS11-201ENST00000524454 PIK3C2BO00750 1634 aa10.4□□□□□ -0.74
VPS11-201ENST00000524454 SYNMO15061 1565 aa10.4□□□□□ -0.74
VPS11-201ENST00000524454 LMTK2Q8IWU2 1503 aa10.4□□□□□ -0.74
VPS11-201ENST00000524454 REM2Q8IYK8 340 aaPredicted RBP10.4□□□□□ -0.74
VPS11-201ENST00000524454 TET3O43151 1660 aa10.4□□□□□ -0.74
VPS11-201ENST00000524454 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
VPS11-201ENST00000524454 NEURL4Q96JN8 1562 aa10.39□□□□□ -0.75
VPS11-201ENST00000524454 E9PCH4 1651 aa10.39□□□□□ -0.75
VPS11-201ENST00000524454 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
VPS11-201ENST00000524454 IQGAP3Q86VI3 1631 aa10.39□□□□□ -0.75
VPS11-201ENST00000524454 MYO5BQ9ULV0 1848 aa10.38□□□□□ -0.75
VPS11-201ENST00000524454 PLA2R1Q13018 1463 aa10.38□□□□□ -0.75
VPS11-201ENST00000524454 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
VPS11-201ENST00000524454 PTPRTO14522 1441 aa10.38□□□□□ -0.75
VPS11-201ENST00000524454 ARHGAP31Q2M1Z3 1444 aa10.38□□□□□ -0.75
VPS11-201ENST00000524454 NAIPQ13075 1403 aa10.37□□□□□ -0.75
VPS11-201ENST00000524454 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
VPS11-201ENST00000524454 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
VPS11-201ENST00000524454 NUP155O75694 1391 aa10.35□□□□□ -0.75
VPS11-201ENST00000524454 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
VPS11-201ENST00000524454 ZNF335Q9H4Z2 1342 aaPredicted RBP10.34□□□□□ -0.75
VPS11-201ENST00000524454 NOS1P29475 1434 aa10.33□□□□□ -0.76
VPS11-201ENST00000524454 PKD2Q13563 968 aa10.33□□□□□ -0.76
VPS11-201ENST00000524454 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
VPS11-201ENST00000524454 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
VPS11-201ENST00000524454 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
VPS11-201ENST00000524454 ADGRB3O60242 1522 aa10.33□□□□□ -0.76
VPS11-201ENST00000524454 IDI1Q13907 227 aa10.32□□□□□ -0.76
VPS11-201ENST00000524454 NPHP4O75161 1426 aaPredicted RBP10.32□□□□□ -0.76
VPS11-201ENST00000524454 STRCP1A6NGW2 1772 aa10.31□□□□□ -0.76
VPS11-201ENST00000524454 RPRD2Q5VT52 1461 aaKnown RBP10.31□□□□□ -0.76
VPS11-201ENST00000524454 ANKLE2Q86XL3 938 aa10.31□□□□□ -0.76
VPS11-201ENST00000524454 STAG3Q9UJ98 1225 aa10.31□□□□□ -0.76
VPS11-201ENST00000524454 KDM5AP29375 1690 aaKnown RBP10.31□□□□□ -0.76
VPS11-201ENST00000524454 TMEM131LA2VDJ0 1609 aa10.3□□□□□ -0.76
VPS11-201ENST00000524454 SLIT1O75093 1534 aa10.3□□□□□ -0.76
VPS11-201ENST00000524454 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
VPS11-201ENST00000524454 SCAF11Q99590 1463 aaKnown RBP10.3□□□□□ -0.76
VPS11-201ENST00000524454 ARHGAP23Q9P227 1491 aa10.3□□□□□ -0.76
VPS11-201ENST00000524454 LTKP29376 864 aa10.29□□□□□ -0.76
VPS11-201ENST00000524454 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
VPS11-201ENST00000524454 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
VPS11-201ENST00000524454 MED14O60244 1454 aa10.29□□□□□ -0.76
VPS11-201ENST00000524454 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
VPS11-201ENST00000524454 TXNDC2Q86VQ3 553 aa10.28□□□□□ -0.76
VPS11-201ENST00000524454 CLTCL1P53675 1640 aa10.28□□□□□ -0.76
VPS11-201ENST00000524454 TMEM2Q9UHN6 1383 aa10.27□□□□□ -0.76
VPS11-201ENST00000524454 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
VPS11-201ENST00000524454 SPDYE1Q8NFV5 336 aaPredicted RBP10.25□□□□□ -0.77
VPS11-201ENST00000524454 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
VPS11-201ENST00000524454 EID1Q9Y6B2 187 aa10.25□□□□□ -0.77
VPS11-201ENST00000524454 ZFYVE9O95405 1425 aa10.24□□□□□ -0.77
VPS11-201ENST00000524454 RIMS2Q9UQ26 1411 aa10.24□□□□□ -0.77
VPS11-201ENST00000524454 KIF1BO60333 1816 aa10.23□□□□□ -0.77
VPS11-201ENST00000524454 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
VPS11-201ENST00000524454 TRPM2O94759 1503 aa10.23□□□□□ -0.77
VPS11-201ENST00000524454 BCANQ96GW7 911 aa10.23□□□□□ -0.77
VPS11-201ENST00000524454 CPS1P31327 1500 aa10.23□□□□□ -0.77
VPS11-201ENST00000524454 SLC26A8Q96RN1 970 aa10.22□□□□□ -0.77
VPS11-201ENST00000524454 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
VPS11-201ENST00000524454 IQSEC2Q5JU85 1478 aa10.2□□□□□ -0.78
VPS11-201ENST00000524454 CHRDL2Q6WN34 429 aa10.2□□□□□ -0.78
VPS11-201ENST00000524454 LRRC7Q96NW7 1537 aa10.2□□□□□ -0.78
VPS11-201ENST00000524454 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
VPS11-201ENST00000524454 UBAP1LF5GYI3 381 aa10.19□□□□□ -0.78
VPS11-201ENST00000524454 ZNF326Q5BKZ1 582 aaKnown RBP10.19□□□□□ -0.78
VPS11-201ENST00000524454 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
VPS11-201ENST00000524454 CHD2O14647 1828 aaKnown RBP10.19□□□□□ -0.78
VPS11-201ENST00000524454 ALKQ9UM73 1620 aa10.18□□□□□ -0.78
VPS11-201ENST00000524454 NRXN3Q9Y4C0 1643 aa10.18□□□□□ -0.78
VPS11-201ENST00000524454 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
VPS11-201ENST00000524454 PLEKHG1Q9ULL1 1385 aa10.18□□□□□ -0.78
VPS11-201ENST00000524454 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
VPS11-201ENST00000524454 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
VPS11-201ENST00000524454 MPHOSPH9Q99550 1183 aa10.17□□□□□ -0.78
VPS11-201ENST00000524454 NWD1Q149M9 1564 aa10.17□□□□□ -0.78
VPS11-201ENST00000524454 PPLO60437 1756 aa10.16□□□□□ -0.78
VPS11-201ENST00000524454 ADAMTS13Q76LX8 1427 aa10.16□□□□□ -0.78
VPS11-201ENST00000524454 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS11-201ENST00000524454 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
VPS11-201ENST00000524454 IFT172Q9UG01 1749 aa10.14□□□□□ -0.79
VPS11-201ENST00000524454 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
VPS11-201ENST00000524454 KCNA6P17658 529 aa10.13□□□□□ -0.79
VPS11-201ENST00000524454 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
VPS11-201ENST00000524454 CCDC144AA2RUR9 1427 aa10.13□□□□□ -0.79
VPS11-201ENST00000524454 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
VPS11-201ENST00000524454 TMEM94Q12767 1356 aa10.13□□□□□ -0.79
VPS11-201ENST00000524454 TONSLQ96HA7 1378 aa10.13□□□□□ -0.79
VPS11-201ENST00000524454 ANKRD30BQ9BXX2 1392 aa10.13□□□□□ -0.79
VPS11-201ENST00000524454 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
VPS11-201ENST00000524454 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
VPS11-201ENST00000524454 NKTRP30414 1462 aaKnown RBP10.11□□□□□ -0.79
VPS11-201ENST00000524454 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
VPS11-201ENST00000524454 FXR2P51116 673 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS11-201ENST00000524454 RGL3Q3MIN7 710 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms