RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
CTNNA1-242ENST00000524292 CPS1P31327 1500 aa13.1□□□□□ -0.31
CTNNA1-242ENST00000524292 MED14O60244 1454 aa13.1□□□□□ -0.31
CTNNA1-242ENST00000524292 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
CTNNA1-242ENST00000524292 FKBP8Q14318 412 aa13.09□□□□□ -0.31
CTNNA1-242ENST00000524292 IQGAP1P46940 1657 aa13.08□□□□□ -0.32
CTNNA1-242ENST00000524292 LMTK2Q8IWU2 1503 aa13.08□□□□□ -0.32
CTNNA1-242ENST00000524292 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-242ENST00000524292 UBR1Q8IWV7 1749 aa13.07□□□□□ -0.32
CTNNA1-242ENST00000524292 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
CTNNA1-242ENST00000524292 SCAF11Q99590 1463 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-242ENST00000524292 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
CTNNA1-242ENST00000524292 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
CTNNA1-242ENST00000524292 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
CTNNA1-242ENST00000524292 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
CTNNA1-242ENST00000524292 EFCAB6Q5THR3 1501 aa13.04□□□□□ -0.32
CTNNA1-242ENST00000524292 PROM2Q8N271 834 aa13.04□□□□□ -0.32
CTNNA1-242ENST00000524292 SLIT1O75093 1534 aa13.03□□□□□ -0.32
CTNNA1-242ENST00000524292 TOM1O60784 492 aa13.03□□□□□ -0.32
CTNNA1-242ENST00000524292 TXNDC2Q86VQ3 553 aa13.03□□□□□ -0.32
CTNNA1-242ENST00000524292 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
CTNNA1-242ENST00000524292 RPRD2Q5VT52 1461 aaKnown RBP13.02□□□□□ -0.33
CTNNA1-242ENST00000524292 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
CTNNA1-242ENST00000524292 ROCK1Q13464 1354 aa13.01□□□□□ -0.33
CTNNA1-242ENST00000524292 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
CTNNA1-242ENST00000524292 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
CTNNA1-242ENST00000524292 KDM5AP29375 1690 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-242ENST00000524292 NOS1P29475 1434 aa13□□□□□ -0.33
CTNNA1-242ENST00000524292 SYNMO15061 1565 aa12.99□□□□□ -0.33
CTNNA1-242ENST00000524292 LTKP29376 864 aa12.99□□□□□ -0.33
CTNNA1-242ENST00000524292 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
CTNNA1-242ENST00000524292 IDI1Q13907 227 aa12.99□□□□□ -0.33
CTNNA1-242ENST00000524292 SLC52A1Q9NWF4 448 aa12.99□□□□□ -0.33
CTNNA1-242ENST00000524292 TET3O43151 1660 aa12.99□□□□□ -0.33
CTNNA1-242ENST00000524292 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
CTNNA1-242ENST00000524292 UNC13BO14795 1591 aa12.98□□□□□ -0.33
CTNNA1-242ENST00000524292 ITGAEP38570 1179 aa12.97□□□□□ -0.33
CTNNA1-242ENST00000524292 POTEHQ6S545 545 aa12.96□□□□□ -0.33
CTNNA1-242ENST00000524292 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-242ENST00000524292 LRRC7Q96NW7 1537 aa12.96□□□□□ -0.33
CTNNA1-242ENST00000524292 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.34
CTNNA1-242ENST00000524292 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
CTNNA1-242ENST00000524292 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTNNA1-242ENST00000524292 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
CTNNA1-242ENST00000524292 IQGAP3Q86VI3 1631 aa12.93□□□□□ -0.34
CTNNA1-242ENST00000524292 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-242ENST00000524292 BCANQ96GW7 911 aa12.93□□□□□ -0.34
CTNNA1-242ENST00000524292 NUP155O75694 1391 aa12.93□□□□□ -0.34
CTNNA1-242ENST00000524292 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-242ENST00000524292 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
CTNNA1-242ENST00000524292 HSPA1LP34931 641 aa12.92□□□□□ -0.34
CTNNA1-242ENST00000524292 E9PCH4 1651 aa12.9□□□□□ -0.34
CTNNA1-242ENST00000524292 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-242ENST00000524292 SLC26A8Q96RN1 970 aa12.9□□□□□ -0.34
CTNNA1-242ENST00000524292 ZFYVE9O95405 1425 aa12.89□□□□□ -0.35
CTNNA1-242ENST00000524292 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
CTNNA1-242ENST00000524292 KCNA6P17658 529 aa12.89□□□□□ -0.35
CTNNA1-242ENST00000524292 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTNNA1-242ENST00000524292 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
CTNNA1-242ENST00000524292 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-242ENST00000524292 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
CTNNA1-242ENST00000524292 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
CTNNA1-242ENST00000524292 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-242ENST00000524292 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
CTNNA1-242ENST00000524292 MYO5BQ9ULV0 1848 aa12.86□□□□□ -0.35
CTNNA1-242ENST00000524292 ILDR2Q71H61 639 aa12.86□□□□□ -0.35
CTNNA1-242ENST00000524292 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-242ENST00000524292 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
CTNNA1-242ENST00000524292 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-242ENST00000524292 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-242ENST00000524292 MSH6P52701 1360 aa12.82□□□□□ -0.36
CTNNA1-242ENST00000524292 DIP2AQ14689 1571 aa12.82□□□□□ -0.36
CTNNA1-242ENST00000524292 NAIPQ13075 1403 aa12.82□□□□□ -0.36
CTNNA1-242ENST00000524292 TBX22Q9Y458 520 aa12.82□□□□□ -0.36
CTNNA1-242ENST00000524292 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
CTNNA1-242ENST00000524292 SOCS7O14512 581 aa12.81□□□□□ -0.36
CTNNA1-242ENST00000524292 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-242ENST00000524292 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-242ENST00000524292 FAM135BQ49AJ0 1406 aa12.8□□□□□ -0.36
CTNNA1-242ENST00000524292 PIK3R4Q99570 1358 aa12.8□□□□□ -0.36
CTNNA1-242ENST00000524292 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
CTNNA1-242ENST00000524292 ZNF326Q5BKZ1 582 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-242ENST00000524292 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-242ENST00000524292 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CTNNA1-242ENST00000524292 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-242ENST00000524292 TRPM2O94759 1503 aa12.78□□□□□ -0.36
CTNNA1-242ENST00000524292 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
CTNNA1-242ENST00000524292 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
CTNNA1-242ENST00000524292 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
CTNNA1-242ENST00000524292 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
CTNNA1-242ENST00000524292 CLTCL1P53675 1640 aa12.75□□□□□ -0.37
CTNNA1-242ENST00000524292 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
CTNNA1-242ENST00000524292 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
CTNNA1-242ENST00000524292 SETBP1Q9Y6X0 1596 aa12.74□□□□□ -0.37
CTNNA1-242ENST00000524292 ATF3P18847 181 aa12.73□□□□□ -0.37
CTNNA1-242ENST00000524292 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
CTNNA1-242ENST00000524292 AMOTL2Q9Y2J4 779 aa12.73□□□□□ -0.37
CTNNA1-242ENST00000524292 KIF1BO60333 1816 aa12.72□□□□□ -0.37
CTNNA1-242ENST00000524292 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
CTNNA1-242ENST00000524292 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms