RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
SPIDR-225ENST00000524141 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
SPIDR-225ENST00000524141 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
SPIDR-225ENST00000524141 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
SPIDR-225ENST00000524141 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
SPIDR-225ENST00000524141 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
SPIDR-225ENST00000524141 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
SPIDR-225ENST00000524141 SYCP2Q9BX26 1530 aa13.3□□□□□ -0.28
SPIDR-225ENST00000524141 SLFN5Q08AF3 891 aa13.3□□□□□ -0.28
SPIDR-225ENST00000524141 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
SPIDR-225ENST00000524141 ABCC2Q92887 1545 aa13.3□□□□□ -0.28
SPIDR-225ENST00000524141 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
SPIDR-225ENST00000524141 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-225ENST00000524141 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
SPIDR-225ENST00000524141 DUOX2Q9NRD8 1548 aa13.28□□□□□ -0.28
SPIDR-225ENST00000524141 TRMT2AQ8IZ69 625 aaKnown RBP13.28□□□□□ -0.28
SPIDR-225ENST00000524141 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
SPIDR-225ENST00000524141 RGS3P49796 1198 aa13.28□□□□□ -0.28
SPIDR-225ENST00000524141 MADDQ8WXG6 1647 aa13.27□□□□□ -0.29
SPIDR-225ENST00000524141 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-225ENST00000524141 FBLN2P98095 1184 aa13.27□□□□□ -0.29
SPIDR-225ENST00000524141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■■■□□ 15.2
SPIDR-225ENST00000524141 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
SPIDR-225ENST00000524141 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
SPIDR-225ENST00000524141 MAPK8IP3Q9UPT6 1336 aa13.26□□□□□ -0.29
SPIDR-225ENST00000524141 E9PSI1 815 aa13.26□□□□□ -0.29
SPIDR-225ENST00000524141 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
SPIDR-225ENST00000524141 BECN1Q14457 450 aa13.25□□□□□ -0.29
SPIDR-225ENST00000524141 FAM43AQ8N2R8 423 aa13.25□□□□□ -0.29
SPIDR-225ENST00000524141 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
SPIDR-225ENST00000524141 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
SPIDR-225ENST00000524141 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
SPIDR-225ENST00000524141 SCAPERQ9BY12 1400 aa13.24□□□□□ -0.29
SPIDR-225ENST00000524141 MYOM1P52179 1685 aa13.24□□□□□ -0.29
SPIDR-225ENST00000524141 SPHKAPQ2M3C7 1700 aa13.23□□□□□ -0.29
SPIDR-225ENST00000524141 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
SPIDR-225ENST00000524141 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
SPIDR-225ENST00000524141 KDM5AP29375 1690 aaKnown RBP13.22□□□□□ -0.29
SPIDR-225ENST00000524141 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
SPIDR-225ENST00000524141 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
SPIDR-225ENST00000524141 AAMPQ13685 434 aa13.21□□□□□ -0.29
SPIDR-225ENST00000524141 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
SPIDR-225ENST00000524141 CEP152O94986 1710 aa13.21□□□□□ -0.3
SPIDR-225ENST00000524141 APAF1O14727 1248 aa13.2□□□□□ -0.3
SPIDR-225ENST00000524141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPIDR-225ENST00000524141 USP19O94966 1318 aa13.2□□□□□ -0.3
SPIDR-225ENST00000524141 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
SPIDR-225ENST00000524141 TRPM2O94759 1503 aa13.2□□□□□ -0.3
SPIDR-225ENST00000524141 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
SPIDR-225ENST00000524141 BCAR3O75815 825 aa13.19□□□□□ -0.3
SPIDR-225ENST00000524141 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
SPIDR-225ENST00000524141 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-225ENST00000524141 IGHDP01880 384 aa13.18□□□□□ -0.3
SPIDR-225ENST00000524141 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
SPIDR-225ENST00000524141 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
SPIDR-225ENST00000524141 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-225ENST00000524141 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
SPIDR-225ENST00000524141 NLRP1Q9C000 1473 aa13.17□□□□□ -0.3
SPIDR-225ENST00000524141 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
SPIDR-225ENST00000524141 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
SPIDR-225ENST00000524141 NEURL4Q96JN8 1562 aa13.14□□□□□ -0.31
SPIDR-225ENST00000524141 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
SPIDR-225ENST00000524141 PTPRTO14522 1441 aa13.14□□□□□ -0.31
SPIDR-225ENST00000524141 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
SPIDR-225ENST00000524141 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-225ENST00000524141 POGKQ9P215 609 aa13.13□□□□□ -0.31
SPIDR-225ENST00000524141 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SPIDR-225ENST00000524141 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
SPIDR-225ENST00000524141 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
SPIDR-225ENST00000524141 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
SPIDR-225ENST00000524141 SEC24BO95487 1268 aa13.11□□□□□ -0.31
SPIDR-225ENST00000524141 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
SPIDR-225ENST00000524141 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-225ENST00000524141 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
SPIDR-225ENST00000524141 ABCC1P33527 1531 aa13.11□□□□□ -0.31
SPIDR-225ENST00000524141 TET3O43151 1660 aa13.1□□□□□ -0.31
SPIDR-225ENST00000524141 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
SPIDR-225ENST00000524141 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SPIDR-225ENST00000524141 PLCH2O75038 1416 aa13.1□□□□□ -0.31
SPIDR-225ENST00000524141 DEPDC5O75140 1603 aa13.1□□□□□ -0.31
SPIDR-225ENST00000524141 MYOM2P54296 1465 aa13.09□□□□□ -0.31
SPIDR-225ENST00000524141 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
SPIDR-225ENST00000524141 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
SPIDR-225ENST00000524141 RARSP54136 660 aaKnown RBP13.08□□□□□ -0.32
SPIDR-225ENST00000524141 SBNO2Q9Y2G9 1366 aa13.08□□□□□ -0.32
SPIDR-225ENST00000524141 MAP3K4Q9Y6R4 1608 aa13.08□□□□□ -0.32
SPIDR-225ENST00000524141 RWDD1Q9H446 243 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-225ENST00000524141 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
SPIDR-225ENST00000524141 SHPRHQ149N8 1683 aa13.07□□□□□ -0.32
SPIDR-225ENST00000524141 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
SPIDR-225ENST00000524141 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
SPIDR-225ENST00000524141 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
SPIDR-225ENST00000524141 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
SPIDR-225ENST00000524141 CARD14Q9BXL6 1004 aa13.06□□□□□ -0.32
SPIDR-225ENST00000524141 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
SPIDR-225ENST00000524141 KANK1Q14678 1352 aa13.05□□□□□ -0.32
SPIDR-225ENST00000524141 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
SPIDR-225ENST00000524141 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
SPIDR-225ENST00000524141 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-225ENST00000524141 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms