RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-215	ENST00000524111	SAMD9L	Q8IVG5	1584 aa		11.33	□□□□□ -0.59
SREK1-215	ENST00000524111	MSH5	O43196	834 aa		11.33	□□□□□ -0.6
SREK1-215	ENST00000524111	TTC37	Q6PGP7	1564 aa		11.33	□□□□□ -0.6
SREK1-215	ENST00000524111	ABCC2	Q92887	1545 aa		11.33	□□□□□ -0.6
SREK1-215	ENST00000524111	CDC42BPA	Q5VT25	1732 aa		11.32	□□□□□ -0.6
SREK1-215	ENST00000524111	ARHGEF12	Q9NZN5	1544 aa		11.32	□□□□□ -0.6
SREK1-215	ENST00000524111	ASXL2	Q76L83	1435 aa		11.32	□□□□□ -0.6
SREK1-215	ENST00000524111	VGF	O15240	615 aa	Predicted RBP	11.31	□□□□□ -0.6
SREK1-215	ENST00000524111	MTHFS	P49914	203 aa		11.31	□□□□□ -0.6
SREK1-215	ENST00000524111	CD109	Q6YHK3	1445 aa		11.31	□□□□□ -0.6
SREK1-215	ENST00000524111	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.31	□□□□□ -0.6
SREK1-215	ENST00000524111	MAPK8IP3	Q9UPT6	1336 aa		11.31	□□□□□ -0.6
SREK1-215	ENST00000524111	PLA2R1	Q13018	1463 aa		11.31	□□□□□ -0.6
SREK1-215	ENST00000524111	CHD1	O14646	1710 aa		11.3	□□□□□ -0.6
SREK1-215	ENST00000524111	BCAR3	O75815	825 aa		11.3	□□□□□ -0.6
SREK1-215	ENST00000524111	CFAP65	Q6ZU64	1925 aa	Known RBP	11.3	□□□□□ -0.6
SREK1-215	ENST00000524111	COG6	Q9Y2V7	657 aa		11.3	□□□□□ -0.6
SREK1-215	ENST00000524111	UHRF1BP1	Q6BDS2	1440 aa		11.3	□□□□□ -0.6
SREK1-215	ENST00000524111	SLC4A3	P48751	1232 aa		11.29	□□□□□ -0.6
SREK1-215	ENST00000524111	IDI1	Q13907	227 aa		11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	FTSJ3	Q8IY81	847 aa	Known RBP	11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	DUOX2	Q9NRD8	1548 aa		11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	ADGB	Q8N7X0	1667 aa		11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	PAK3	O75914	559 aa	Predicted RBP	11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	PDE4A	P27815	886 aa		11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	NOS1	P29475	1434 aa		11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	BCORL1	Q5H9F3	1711 aa		11.28	□□□□□ -0.6
SREK1-215	ENST00000524111	PANK1	Q8TE04	598 aa		11.27	□□□□□ -0.6
SREK1-215	ENST00000524111	EVC2	Q86UK5	1308 aa		11.27	□□□□□ -0.6
SREK1-215	ENST00000524111	PRAM1	Q96QH2	718 aa		11.27	□□□□□ -0.61
SREK1-215	ENST00000524111	WDR7	Q9Y4E6	1490 aa		11.27	□□□□□ -0.61
SREK1-215	ENST00000524111	ZBTB7C	A1YPR0	619 aa		11.27	□□□□□ -0.61
SREK1-215	ENST00000524111	C14orf37	Q86TY3	774 aa		11.27	□□□□□ -0.61
SREK1-215	ENST00000524111	ELL2	O00472	640 aa	Predicted RBP	11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	CGNL1	Q0VF96	1302 aa		11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	PARD3	Q8TEW0	1356 aa		11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	TCERG1	O14776	1098 aa	Known RBP	11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	TCP11L2	Q8N4U5	519 aa		11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	FBLN1	P23142	703 aa		11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	CARD14	Q9BXL6	1004 aa		11.26	□□□□□ -0.61
SREK1-215	ENST00000524111	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.25	□□□□□ -0.61
SREK1-215	ENST00000524111	FANCI	Q9NVI1	1328 aa		11.24	□□□□□ -0.61
SREK1-215	ENST00000524111	KDM5C	P41229	1560 aa		11.24	□□□□□ -0.61
SREK1-215	ENST00000524111	ARX	Q96QS3	562 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	TERF2IP	Q9NYB0	399 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	NSD3	Q9BZ95	1437 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	UGGT1	Q9NYU2	1555 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	SCAF11	Q99590	1463 aa	Known RBP	11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	STAC3	Q96MF2	364 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	IPO9	Q96P70	1041 aa	Known RBP	11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	TRH	P20396	242 aa	Predicted RBP	11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	WAPL	Q7Z5K2	1190 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.23	□□□□□ -0.61
SREK1-215	ENST00000524111	ARHGEF5	Q12774	1597 aa		11.23	□□□□□ -0.61
SREK1-215	ENST00000524111		E9PSI1	815 aa		11.22	□□□□□ -0.61
SREK1-215	ENST00000524111	TSR2	Q969E8	191 aa	Known RBP	11.22	□□□□□ -0.61
SREK1-215	ENST00000524111	HMOX1	P09601	288 aa		11.22	□□□□□ -0.61
SREK1-215	ENST00000524111	SMC4	Q9NTJ3	1288 aa		11.22	□□□□□ -0.61
SREK1-215	ENST00000524111	DUSP27	Q5VZP5	1158 aa		11.21	□□□□□ -0.61
SREK1-215	ENST00000524111	CABP1	Q9NZU7	370 aa		11.21	□□□□□ -0.61
SREK1-215	ENST00000524111	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.21	□□□□□ -0.61
SREK1-215	ENST00000524111	CDC42BPB	Q9Y5S2	1711 aa		11.21	□□□□□ -0.62
SREK1-215	ENST00000524111	PREX2	Q70Z35	1606 aa		11.21	□□□□□ -0.62
SREK1-215	ENST00000524111	PLEKHH1	Q9ULM0	1364 aa		11.21	□□□□□ -0.62
SREK1-215	ENST00000524111	DMRT2	Q9Y5R5	561 aa		11.21	□□□□□ -0.62
SREK1-215	ENST00000524111	ADCY10	Q96PN6	1610 aa		11.2	□□□□□ -0.62
SREK1-215	ENST00000524111	TXNDC2	Q86VQ3	553 aa		11.2	□□□□□ -0.62
SREK1-215	ENST00000524111	LRPPRC	P42704	1394 aa	Known RBP	11.2	□□□□□ -0.62
SREK1-215	ENST00000524111	ITPRIP	Q8IWB1	547 aa		11.2	□□□□□ -0.62
SREK1-215	ENST00000524111	RUNDC1	Q96C34	613 aa		11.2	□□□□□ -0.62
SREK1-215	ENST00000524111	SPRYD3	Q8NCJ5	442 aa		11.19	□□□□□ -0.62
SREK1-215	ENST00000524111	GPRASP1	Q5JY77	1395 aa		11.19	□□□□□ -0.62
SREK1-215	ENST00000524111	SLFN5	Q08AF3	891 aa		11.19	□□□□□ -0.62
SREK1-215	ENST00000524111	C14orf93	Q9H972	538 aa	Known RBP	11.19	□□□□□ -0.62
SREK1-215	ENST00000524111	MYO5C	Q9NQX4	1742 aa		11.18	□□□□□ -0.62
SREK1-215	ENST00000524111	ATP10A	O60312	1499 aa		11.18	□□□□□ -0.62
SREK1-215	ENST00000524111	WWC1	Q8IX03	1113 aa		11.18	□□□□□ -0.62
SREK1-215	ENST00000524111	KDM5D	Q9BY66	1539 aa		11.18	□□□□□ -0.62
SREK1-215	ENST00000524111	CDK19	Q9BWU1	502 aa		11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	UPF2	Q9HAU5	1272 aa	Known RBP	11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	MAGI2	Q86UL8	1455 aa		11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	MAST1	Q9Y2H9	1570 aa		11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	RIPK4	P57078	832 aa		11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	MYH16	Q9H6N6	1097 aa		11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	ATP7A	Q04656	1500 aa		11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	DEK	P35659	375 aa	Known RBP	11.17	□□□□□ -0.62
SREK1-215	ENST00000524111	CROCC2	H7BZ55	1655 aa		11.16	□□□□□ -0.62
SREK1-215	ENST00000524111	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.16	□□□□□ -0.62
SREK1-215	ENST00000524111	APBB1	O00213	710 aa		11.16	□□□□□ -0.62
SREK1-215	ENST00000524111	LMOD2	Q6P5Q4	547 aa		11.16	□□□□□ -0.62
SREK1-215	ENST00000524111	THUMPD2	Q9BTF0	503 aa	Known RBP	11.15	□□□□□ -0.62
SREK1-215	ENST00000524111	TNN	Q9UQP3	1299 aa		11.15	□□□□□ -0.62
SREK1-215	ENST00000524111	SLC52A1	Q9NWF4	448 aa		11.15	□□□□□ -0.62
SREK1-215	ENST00000524111	DIAPH1	O60610	1272 aa	Known RBP	11.15	□□□□□ -0.62
SREK1-215	ENST00000524111	ABCC1	P33527	1531 aa		11.15	□□□□□ -0.63
SREK1-215	ENST00000524111	SLC26A8	Q96RN1	970 aa		11.14	□□□□□ -0.63
SREK1-215	ENST00000524111	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.14	□□□□□ -0.63
SREK1-215	ENST00000524111	ZNF518A	Q6AHZ1	1483 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms