RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 FANCAO15360 1455 aa14.68□□□□□ -0.06
HDAC9-228ENST00000524023 PPP2R1AP30153 589 aa14.68□□□□□ -0.06
HDAC9-228ENST00000524023 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
HDAC9-228ENST00000524023 MYOM1P52179 1685 aa14.68□□□□□ -0.06
HDAC9-228ENST00000524023 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
HDAC9-228ENST00000524023 ASXL1Q8IXJ9 1541 aa14.66□□□□□ -0.06
HDAC9-228ENST00000524023 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
HDAC9-228ENST00000524023 TCERG1O14776 1098 aaKnown RBP14.66□□□□□ -0.06
HDAC9-228ENST00000524023 KIF3BO15066 747 aa14.66□□□□□ -0.06
HDAC9-228ENST00000524023 PLIN1O60240 522 aa14.65□□□□□ -0.06
HDAC9-228ENST00000524023 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
HDAC9-228ENST00000524023 MROH1Q8NDA8 1641 aa14.65□□□□□ -0.06
HDAC9-228ENST00000524023 IPO9Q96P70 1041 aaKnown RBP14.65□□□□□ -0.06
HDAC9-228ENST00000524023 KDM5AP29375 1690 aaKnown RBP14.64□□□□□ -0.07
HDAC9-228ENST00000524023 ADGRL1O94910 1474 aa14.64□□□□□ -0.07
HDAC9-228ENST00000524023 WDR43Q15061 677 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC9-228ENST00000524023 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
HDAC9-228ENST00000524023 NPC1L1Q9UHC9 1359 aa14.64□□□□□ -0.07
HDAC9-228ENST00000524023 MAP3K4Q9Y6R4 1608 aa14.64□□□□□ -0.07
HDAC9-228ENST00000524023 KIF1BO60333 1816 aa14.63□□□□□ -0.07
HDAC9-228ENST00000524023 PLEKHH1Q9ULM0 1364 aa14.63□□□□□ -0.07
HDAC9-228ENST00000524023 MYOM2P54296 1465 aa14.62□□□□□ -0.07
HDAC9-228ENST00000524023 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
HDAC9-228ENST00000524023 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
HDAC9-228ENST00000524023 ABCA6Q8N139 1617 aa14.62□□□□□ -0.07
HDAC9-228ENST00000524023 UGGT1Q9NYU2 1555 aa14.62□□□□□ -0.07
HDAC9-228ENST00000524023 ZNF521Q96K83 1311 aa14.61□□□□□ -0.07
HDAC9-228ENST00000524023 IFT172Q9UG01 1749 aa14.61□□□□□ -0.07
HDAC9-228ENST00000524023 EFCAB6Q5THR3 1501 aa14.61□□□□□ -0.07
HDAC9-228ENST00000524023 MS4A1P11836 297 aa14.6□□□□□ -0.07
HDAC9-228ENST00000524023 CFAP70Q5T0N1 1121 aa14.6□□□□□ -0.07
HDAC9-228ENST00000524023 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
HDAC9-228ENST00000524023 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
HDAC9-228ENST00000524023 ADGRF5Q8IZF2 1346 aa14.59□□□□□ -0.07
HDAC9-228ENST00000524023 SLC24A1O60721 1099 aa14.59□□□□□ -0.07
HDAC9-228ENST00000524023 PDE4AP27815 886 aa14.59□□□□□ -0.07
HDAC9-228ENST00000524023 KIDINS220Q9ULH0 1771 aa14.59□□□□□ -0.07
HDAC9-228ENST00000524023 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.07
HDAC9-228ENST00000524023 BACH2Q9BYV9 841 aa14.58□□□□□ -0.08
HDAC9-228ENST00000524023 MROH2AA6NES4 1674 aa14.58□□□□□ -0.08
HDAC9-228ENST00000524023 PPRC1Q5VV67 1664 aaKnown RBP14.58□□□□□ -0.08
HDAC9-228ENST00000524023 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
HDAC9-228ENST00000524023 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
HDAC9-228ENST00000524023 C20orf194Q5TEA3 1177 aa14.57□□□□□ -0.08
HDAC9-228ENST00000524023 NRXN1Q9ULB1 1477 aa14.56□□□□□ -0.08
HDAC9-228ENST00000524023 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
HDAC9-228ENST00000524023 MYO3AQ8NEV4 1616 aa14.56□□□□□ -0.08
HDAC9-228ENST00000524023 SLFN5Q08AF3 891 aa14.54□□□□□ -0.08
HDAC9-228ENST00000524023 BCL11AQ9H165 835 aa14.54□□□□□ -0.08
HDAC9-228ENST00000524023 ZNF518AQ6AHZ1 1483 aa14.53□□□□□ -0.08
HDAC9-228ENST00000524023 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
HDAC9-228ENST00000524023 TRMT2AQ8IZ69 625 aaKnown RBP14.53□□□□□ -0.08
HDAC9-228ENST00000524023 CARD14Q9BXL6 1004 aa14.53□□□□□ -0.08
HDAC9-228ENST00000524023 SBNO2Q9Y2G9 1366 aa14.53□□□□□ -0.08
HDAC9-228ENST00000524023 ADGRB3O60242 1522 aa14.53□□□□□ -0.08
HDAC9-228ENST00000524023 NBR1Q14596 966 aa14.53□□□□□ -0.08
HDAC9-228ENST00000524023 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
HDAC9-228ENST00000524023 KDM2BQ8NHM5 1336 aa14.52□□□□□ -0.09
HDAC9-228ENST00000524023 SETBP1Q9Y6X0 1596 aa14.52□□□□□ -0.09
HDAC9-228ENST00000524023 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
HDAC9-228ENST00000524023 NOS1P29475 1434 aa14.51□□□□□ -0.09
HDAC9-228ENST00000524023 APAF1O14727 1248 aa14.51□□□□□ -0.09
HDAC9-228ENST00000524023 SKAP1Q86WV1 359 aa14.5□□□□□ -0.09
HDAC9-228ENST00000524023 CFAP65Q6ZU64 1925 aaKnown RBP14.49□□□□□ -0.09
HDAC9-228ENST00000524023 PPLO60437 1756 aa14.49□□□□□ -0.09
HDAC9-228ENST00000524023 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
HDAC9-228ENST00000524023 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
HDAC9-228ENST00000524023 NKTRP30414 1462 aaKnown RBP14.49□□□□□ -0.09
HDAC9-228ENST00000524023 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
HDAC9-228ENST00000524023 CENPQQ7L2Z9 268 aaPredicted RBP14.49□□□□□ -0.09
HDAC9-228ENST00000524023 ZC3H13Q5T200 1668 aaKnown RBP14.48□□□□□ -0.09
HDAC9-228ENST00000524023 NPATQ14207 1427 aa14.48□□□□□ -0.09
HDAC9-228ENST00000524023 FRMPD1Q5SYB0 1578 aa14.47□□□□□ -0.09
HDAC9-228ENST00000524023 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
HDAC9-228ENST00000524023 NGEFQ8N5V2 710 aa14.47□□□□□ -0.09
HDAC9-228ENST00000524023 POLR3AO14802 1390 aaPredicted RBP14.47□□□□□ -0.09
HDAC9-228ENST00000524023 E9PSI1 815 aa14.47□□□□□ -0.09
HDAC9-228ENST00000524023 CFAP74Q9C0B2 1584 aa14.46□□□□□ -0.09
HDAC9-228ENST00000524023 QRICH2Q9H0J4 1663 aa14.46□□□□□ -0.09
HDAC9-228ENST00000524023 C14orf93Q9H972 538 aaKnown RBP14.46□□□□□ -0.09
HDAC9-228ENST00000524023 POGZQ7Z3K3 1410 aa14.46□□□□□ -0.09
HDAC9-228ENST00000524023 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.1
HDAC9-228ENST00000524023 ADGRB1O14514 1584 aa14.45□□□□□ -0.1
HDAC9-228ENST00000524023 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
HDAC9-228ENST00000524023 NSD3Q9BZ95 1437 aa14.44□□□□□ -0.1
HDAC9-228ENST00000524023 HECW2Q9P2P5 1572 aa14.44□□□□□ -0.1
HDAC9-228ENST00000524023 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
HDAC9-228ENST00000524023 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
HDAC9-228ENST00000524023 SHPRHQ149N8 1683 aa14.44□□□□□ -0.1
HDAC9-228ENST00000524023 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC9-228ENST00000524023 GGT6Q6P531 493 aa14.43□□□□□ -0.1
HDAC9-228ENST00000524023 RPGRIP1LQ68CZ1 1315 aa14.43□□□□□ -0.1
HDAC9-228ENST00000524023 BCAR3O75815 825 aa14.43□□□□□ -0.1
HDAC9-228ENST00000524023 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
HDAC9-228ENST00000524023 MORC1Q86VD1 984 aa14.42□□□□□ -0.1
HDAC9-228ENST00000524023 ABCC3O15438 1527 aa14.42□□□□□ -0.1
HDAC9-228ENST00000524023 SLC12A5Q9H2X9 1139 aa14.41□□□□□ -0.1
HDAC9-228ENST00000524023 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
HDAC9-228ENST00000524023 TMEM132EQ6IEE7 984 aa14.41□□□□□ -0.1
HDAC9-228ENST00000524023 WWC1Q8IX03 1113 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms