RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 SYNMO15061 1565 aa23.62■■□□□ 1.37
IKBKB-228ENST00000523517 CEP152O94986 1710 aa23.61■■□□□ 1.37
IKBKB-228ENST00000523517 TET3O43151 1660 aa23.6■■□□□ 1.37
IKBKB-228ENST00000523517 EIF3AQ14152 1382 aaKnown RBP23.6■■□□□ 1.37
IKBKB-228ENST00000523517 CRBNQ96SW2 442 aa23.6■■□□□ 1.37
IKBKB-228ENST00000523517 MS4A1P11836 297 aa23.59■■□□□ 1.37
IKBKB-228ENST00000523517 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
IKBKB-228ENST00000523517 VWDEQ8N2E2 1590 aa23.59■■□□□ 1.37
IKBKB-228ENST00000523517 KIF3BO15066 747 aa23.59■■□□□ 1.37
IKBKB-228ENST00000523517 BCL11AQ9H165 835 aa23.59■■□□□ 1.37
IKBKB-228ENST00000523517 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
IKBKB-228ENST00000523517 ZBTB47Q9UFB7 747 aaPredicted RBP23.58■■□□□ 1.37
IKBKB-228ENST00000523517 FANCAO15360 1455 aa23.58■■□□□ 1.37
IKBKB-228ENST00000523517 NPC1L1Q9UHC9 1359 aa23.58■■□□□ 1.37
IKBKB-228ENST00000523517 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.36
IKBKB-228ENST00000523517 PDE4AP27815 886 aa23.57■■□□□ 1.36
IKBKB-228ENST00000523517 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
IKBKB-228ENST00000523517 INO80Q9ULG1 1556 aaPredicted RBP23.56■■□□□ 1.36
IKBKB-228ENST00000523517 ZNF521Q96K83 1311 aa23.55■■□□□ 1.36
IKBKB-228ENST00000523517 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
IKBKB-228ENST00000523517 NEURL4Q96JN8 1562 aa23.54■■□□□ 1.36
IKBKB-228ENST00000523517 BACH2Q9BYV9 841 aa23.54■■□□□ 1.36
IKBKB-228ENST00000523517 ABCA9Q8IUA7 1624 aa23.53■■□□□ 1.36
IKBKB-228ENST00000523517 SLC24A1O60721 1099 aa23.52■■□□□ 1.36
IKBKB-228ENST00000523517 GOLGA2Q08379 1002 aa23.52■■□□□ 1.36
IKBKB-228ENST00000523517 CFAP70Q5T0N1 1121 aa23.52■■□□□ 1.36
IKBKB-228ENST00000523517 C20orf194Q5TEA3 1177 aa23.51■■□□□ 1.35
IKBKB-228ENST00000523517 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
IKBKB-228ENST00000523517 NBR1Q14596 966 aa23.51■■□□□ 1.35
IKBKB-228ENST00000523517 KIAA1210Q9ULL0 1709 aa23.51■■□□□ 1.35
IKBKB-228ENST00000523517 MYOM2P54296 1465 aa23.5■■□□□ 1.35
IKBKB-228ENST00000523517 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
IKBKB-228ENST00000523517 MYOM1P52179 1685 aa23.49■■□□□ 1.35
IKBKB-228ENST00000523517 NPM2Q86SE8 214 aaKnown RBP23.49■■□□□ 1.35
IKBKB-228ENST00000523517 MROH1Q8NDA8 1641 aa23.47■■□□□ 1.35
IKBKB-228ENST00000523517 UGGT1Q9NYU2 1555 aa23.46■■□□□ 1.35
IKBKB-228ENST00000523517 ERVK-7P63135 1459 aa23.46■■□□□ 1.35
IKBKB-228ENST00000523517 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
IKBKB-228ENST00000523517 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
IKBKB-228ENST00000523517 DEKP35659 375 aaKnown RBP23.45■■□□□ 1.35
IKBKB-228ENST00000523517 KDM5AP29375 1690 aaKnown RBP23.44■■□□□ 1.34
IKBKB-228ENST00000523517 CCDC146Q8IYE0 955 aa23.43■■□□□ 1.34
IKBKB-228ENST00000523517 TRMT2AQ8IZ69 625 aaKnown RBP23.43■■□□□ 1.34
IKBKB-228ENST00000523517 KDM2BQ8NHM5 1336 aa23.43■■□□□ 1.34
IKBKB-228ENST00000523517 ABCA6Q8N139 1617 aa23.43■■□□□ 1.34
IKBKB-228ENST00000523517 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
IKBKB-228ENST00000523517 CARD14Q9BXL6 1004 aa23.43■■□□□ 1.34
IKBKB-228ENST00000523517 EFCAB6Q5THR3 1501 aa23.42■■□□□ 1.34
IKBKB-228ENST00000523517 SKAP1Q86WV1 359 aa23.41■■□□□ 1.34
IKBKB-228ENST00000523517 APAF1O14727 1248 aa23.4■■□□□ 1.34
IKBKB-228ENST00000523517 NRXN1Q9ULB1 1477 aa23.4■■□□□ 1.34
IKBKB-228ENST00000523517 CENPQQ7L2Z9 268 aaPredicted RBP23.4■■□□□ 1.34
IKBKB-228ENST00000523517 ASXL2Q76L83 1435 aa23.39■■□□□ 1.34
IKBKB-228ENST00000523517 SBNO2Q9Y2G9 1366 aa23.38■■□□□ 1.33
IKBKB-228ENST00000523517 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
IKBKB-228ENST00000523517 SPINK5Q9NQ38 1064 aaPredicted RBP23.36■■□□□ 1.33
IKBKB-228ENST00000523517 PPRC1Q5VV67 1664 aaKnown RBP23.35■■□□□ 1.33
IKBKB-228ENST00000523517 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
IKBKB-228ENST00000523517 RTL5Q5HYW3 569 aaPredicted RBP23.34■■□□□ 1.33
IKBKB-228ENST00000523517 NKTRP30414 1462 aaKnown RBP23.34■■□□□ 1.33
IKBKB-228ENST00000523517 E9PSI1 815 aa23.34■■□□□ 1.33
IKBKB-228ENST00000523517 NOS1P29475 1434 aa23.33■■□□□ 1.33
IKBKB-228ENST00000523517 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.33
IKBKB-228ENST00000523517 KIF1BO60333 1816 aa23.33■■□□□ 1.33
IKBKB-228ENST00000523517 ZNF518AQ6AHZ1 1483 aa23.33■■□□□ 1.32
IKBKB-228ENST00000523517 KIDINS220Q9ULH0 1771 aa23.33■■□□□ 1.32
IKBKB-228ENST00000523517 IFT172Q9UG01 1749 aa23.32■■□□□ 1.32
IKBKB-228ENST00000523517 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
IKBKB-228ENST00000523517 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
IKBKB-228ENST00000523517 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
IKBKB-228ENST00000523517 MROH2AA6NES4 1674 aa23.31■■□□□ 1.32
IKBKB-228ENST00000523517 POLR3AO14802 1390 aaPredicted RBP23.31■■□□□ 1.32
IKBKB-228ENST00000523517 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
IKBKB-228ENST00000523517 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
IKBKB-228ENST00000523517 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
IKBKB-228ENST00000523517 TRAK1Q9UPV9 953 aa23.28■■□□□ 1.32
IKBKB-228ENST00000523517 BCAR3O75815 825 aa23.27■■□□□ 1.32
IKBKB-228ENST00000523517 DMRT2Q9Y5R5 561 aa23.27■■□□□ 1.32
IKBKB-228ENST00000523517 NPATQ14207 1427 aa23.26■■□□□ 1.31
IKBKB-228ENST00000523517 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
IKBKB-228ENST00000523517 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
IKBKB-228ENST00000523517 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
IKBKB-228ENST00000523517 SLC12A5Q9H2X9 1139 aa23.23■■□□□ 1.31
IKBKB-228ENST00000523517 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
IKBKB-228ENST00000523517 GGT6Q6P531 493 aa23.23■■□□□ 1.31
IKBKB-228ENST00000523517 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
IKBKB-228ENST00000523517 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
IKBKB-228ENST00000523517 POGZQ7Z3K3 1410 aa23.22■■□□□ 1.31
IKBKB-228ENST00000523517 NPM1P06748 294 aaKnown RBP eCLIP23.21■■□□□ 1.31
IKBKB-228ENST00000523517 ADGRB1O14514 1584 aa23.21■■□□□ 1.31
IKBKB-228ENST00000523517 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
IKBKB-228ENST00000523517 C8orf34Q49A92 452 aa23.2■■□□□ 1.3
IKBKB-228ENST00000523517 TMEM132EQ6IEE7 984 aa23.2■■□□□ 1.3
IKBKB-228ENST00000523517 FRMPD1Q5SYB0 1578 aa23.2■■□□□ 1.3
IKBKB-228ENST00000523517 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
IKBKB-228ENST00000523517 CD109Q6YHK3 1445 aa23.19■■□□□ 1.3
IKBKB-228ENST00000523517 PDE3AQ14432 1141 aa23.19■■□□□ 1.3
IKBKB-228ENST00000523517 USP35Q9P2H5 1018 aa23.19■■□□□ 1.3
IKBKB-228ENST00000523517 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
IKBKB-228ENST00000523517 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms