RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 CFAP65Q6ZU64 1925 aaKnown RBP11.64□□□□□ -0.55
FAM49B-227ENST00000523514 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
FAM49B-227ENST00000523514 NUP155O75694 1391 aa11.62□□□□□ -0.55
FAM49B-227ENST00000523514 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
FAM49B-227ENST00000523514 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
FAM49B-227ENST00000523514 KDM5AP29375 1690 aaKnown RBP11.61□□□□□ -0.55
FAM49B-227ENST00000523514 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
FAM49B-227ENST00000523514 NOS1P29475 1434 aa11.6□□□□□ -0.55
FAM49B-227ENST00000523514 E9PCH4 1651 aa11.6□□□□□ -0.55
FAM49B-227ENST00000523514 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
FAM49B-227ENST00000523514 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
FAM49B-227ENST00000523514 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
FAM49B-227ENST00000523514 SYNMO15061 1565 aa11.59□□□□□ -0.55
FAM49B-227ENST00000523514 POLR1AO95602 1720 aaPredicted RBP11.59□□□□□ -0.55
FAM49B-227ENST00000523514 PIK3C2BO00750 1634 aa11.58□□□□□ -0.56
FAM49B-227ENST00000523514 PKD2Q13563 968 aa11.58□□□□□ -0.56
FAM49B-227ENST00000523514 THEMISQ8N1K5 641 aaPredicted RBP11.58□□□□□ -0.56
FAM49B-227ENST00000523514 PTPRTO14522 1441 aa11.58□□□□□ -0.56
FAM49B-227ENST00000523514 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
FAM49B-227ENST00000523514 ADGRB3O60242 1522 aa11.56□□□□□ -0.56
FAM49B-227ENST00000523514 SPHKAPQ2M3C7 1700 aa11.56□□□□□ -0.56
FAM49B-227ENST00000523514 SETD5Q9C0A6 1442 aa11.55□□□□□ -0.56
FAM49B-227ENST00000523514 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
FAM49B-227ENST00000523514 SLIT1O75093 1534 aa11.54□□□□□ -0.56
FAM49B-227ENST00000523514 ARHGAP23Q9P227 1491 aa11.53□□□□□ -0.56
FAM49B-227ENST00000523514 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
FAM49B-227ENST00000523514 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
FAM49B-227ENST00000523514 MED14O60244 1454 aa11.52□□□□□ -0.56
FAM49B-227ENST00000523514 TRPM2O94759 1503 aa11.52□□□□□ -0.57
FAM49B-227ENST00000523514 IDI1Q13907 227 aa11.52□□□□□ -0.57
FAM49B-227ENST00000523514 ANKLE2Q86XL3 938 aa11.52□□□□□ -0.57
FAM49B-227ENST00000523514 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
FAM49B-227ENST00000523514 TMEM131LA2VDJ0 1609 aa11.51□□□□□ -0.57
FAM49B-227ENST00000523514 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
FAM49B-227ENST00000523514 IQGAP1P46940 1657 aa11.51□□□□□ -0.57
FAM49B-227ENST00000523514 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
FAM49B-227ENST00000523514 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
FAM49B-227ENST00000523514 RAB3GAP2Q9H2M9 1393 aa11.5□□□□□ -0.57
FAM49B-227ENST00000523514 TMEM2Q9UHN6 1383 aa11.5□□□□□ -0.57
FAM49B-227ENST00000523514 NPHP4O75161 1426 aaPredicted RBP11.5□□□□□ -0.57
FAM49B-227ENST00000523514 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
FAM49B-227ENST00000523514 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
FAM49B-227ENST00000523514 HRCP23327 699 aa11.48□□□□□ -0.57
FAM49B-227ENST00000523514 KIF1BO60333 1816 aa11.48□□□□□ -0.57
FAM49B-227ENST00000523514 CLTCL1P53675 1640 aa11.47□□□□□ -0.57
FAM49B-227ENST00000523514 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
FAM49B-227ENST00000523514 MPHOSPH9Q99550 1183 aa11.46□□□□□ -0.57
FAM49B-227ENST00000523514 ZFYVE9O95405 1425 aa11.45□□□□□ -0.58
FAM49B-227ENST00000523514 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
FAM49B-227ENST00000523514 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
FAM49B-227ENST00000523514 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
FAM49B-227ENST00000523514 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
FAM49B-227ENST00000523514 CCDC144AA2RUR9 1427 aa11.43□□□□□ -0.58
FAM49B-227ENST00000523514 LTBP4Q8N2S1 1624 aa11.43□□□□□ -0.58
FAM49B-227ENST00000523514 LTKP29376 864 aa11.43□□□□□ -0.58
FAM49B-227ENST00000523514 CPS1P31327 1500 aa11.43□□□□□ -0.58
FAM49B-227ENST00000523514 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
FAM49B-227ENST00000523514 PPP1R15AO75807 674 aaPredicted RBP11.42□□□□□ -0.58
FAM49B-227ENST00000523514 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
FAM49B-227ENST00000523514 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
FAM49B-227ENST00000523514 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
FAM49B-227ENST00000523514 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
FAM49B-227ENST00000523514 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
FAM49B-227ENST00000523514 NEXMIFQ5QGS0 1516 aa11.4□□□□□ -0.59
FAM49B-227ENST00000523514 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
FAM49B-227ENST00000523514 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
FAM49B-227ENST00000523514 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
FAM49B-227ENST00000523514 RPGRIP1LQ68CZ1 1315 aa11.37□□□□□ -0.59
FAM49B-227ENST00000523514 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
FAM49B-227ENST00000523514 PPLO60437 1756 aa11.37□□□□□ -0.59
FAM49B-227ENST00000523514 BCANQ96GW7 911 aa11.37□□□□□ -0.59
FAM49B-227ENST00000523514 NWD1Q149M9 1564 aa11.37□□□□□ -0.59
FAM49B-227ENST00000523514 STRCP1A6NGW2 1772 aa11.36□□□□□ -0.59
FAM49B-227ENST00000523514 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
FAM49B-227ENST00000523514 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
FAM49B-227ENST00000523514 POTEHQ6S545 545 aa11.35□□□□□ -0.59
FAM49B-227ENST00000523514 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
FAM49B-227ENST00000523514 ANKRD30BQ9BXX2 1392 aa11.35□□□□□ -0.59
FAM49B-227ENST00000523514 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
FAM49B-227ENST00000523514 NRXN3Q9Y4C0 1643 aa11.35□□□□□ -0.59
FAM49B-227ENST00000523514 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
FAM49B-227ENST00000523514 FBXO41Q8TF61 875 aa11.34□□□□□ -0.59
FAM49B-227ENST00000523514 SLC26A8Q96RN1 970 aa11.34□□□□□ -0.59
FAM49B-227ENST00000523514 TBX22Q9Y458 520 aa11.34□□□□□ -0.59
FAM49B-227ENST00000523514 CHD2O14647 1828 aaKnown RBP11.34□□□□□ -0.59
FAM49B-227ENST00000523514 ADAMTS13Q76LX8 1427 aa11.34□□□□□ -0.59
FAM49B-227ENST00000523514 KCNA6P17658 529 aa11.33□□□□□ -0.6
FAM49B-227ENST00000523514 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
FAM49B-227ENST00000523514 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
FAM49B-227ENST00000523514 MYOM2P54296 1465 aa11.3□□□□□ -0.6
FAM49B-227ENST00000523514 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
FAM49B-227ENST00000523514 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
FAM49B-227ENST00000523514 LAMC1P11047 1609 aa11.29□□□□□ -0.6
FAM49B-227ENST00000523514 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
FAM49B-227ENST00000523514 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
FAM49B-227ENST00000523514 XIRP1Q702N8 1843 aaKnown RBP11.28□□□□□ -0.6
FAM49B-227ENST00000523514 ALKQ9UM73 1620 aa11.28□□□□□ -0.6
FAM49B-227ENST00000523514 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
FAM49B-227ENST00000523514 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
FAM49B-227ENST00000523514 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms