RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
SDCBP-212ENST00000523483 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
SDCBP-212ENST00000523483 PTPRMP28827 1452 aa13.14□□□□□ -0.31
SDCBP-212ENST00000523483 PIK3C2BO00750 1634 aa13.13□□□□□ -0.31
SDCBP-212ENST00000523483 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
SDCBP-212ENST00000523483 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
SDCBP-212ENST00000523483 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
SDCBP-212ENST00000523483 TRAK1Q9UPV9 953 aa13.13□□□□□ -0.31
SDCBP-212ENST00000523483 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
SDCBP-212ENST00000523483 RIMS2Q9UQ26 1411 aa13.12□□□□□ -0.31
SDCBP-212ENST00000523483 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
SDCBP-212ENST00000523483 A2ML1A8K2U0 1454 aa13.12□□□□□ -0.31
SDCBP-212ENST00000523483 HSPA2P54652 639 aa13.12□□□□□ -0.31
SDCBP-212ENST00000523483 USP47Q96K76 1375 aa13.12□□□□□ -0.31
SDCBP-212ENST00000523483 ST20-MTHFSA0A0A6YYL1 179 aa13.11□□□□□ -0.31
SDCBP-212ENST00000523483 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
SDCBP-212ENST00000523483 LTKP29376 864 aa13.11□□□□□ -0.31
SDCBP-212ENST00000523483 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
SDCBP-212ENST00000523483 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.1□□□□□ -0.31
SDCBP-212ENST00000523483 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
SDCBP-212ENST00000523483 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
SDCBP-212ENST00000523483 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
SDCBP-212ENST00000523483 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
SDCBP-212ENST00000523483 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
SDCBP-212ENST00000523483 UHRF1BP1Q6BDS2 1440 aa13.09□□□□□ -0.31
SDCBP-212ENST00000523483 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
SDCBP-212ENST00000523483 RALGAPBQ86X10 1494 aa13.07□□□□□ -0.32
SDCBP-212ENST00000523483 C14orf93Q9H972 538 aaKnown RBP13.06□□□□□ -0.32
SDCBP-212ENST00000523483 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
SDCBP-212ENST00000523483 NEXMIFQ5QGS0 1516 aa13.06□□□□□ -0.32
SDCBP-212ENST00000523483 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
SDCBP-212ENST00000523483 MYOM2P54296 1465 aa13.04□□□□□ -0.32
SDCBP-212ENST00000523483 POGKQ9P215 609 aa13.04□□□□□ -0.32
SDCBP-212ENST00000523483 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
SDCBP-212ENST00000523483 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
SDCBP-212ENST00000523483 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
SDCBP-212ENST00000523483 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
SDCBP-212ENST00000523483 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.32
SDCBP-212ENST00000523483 SETD1BQ9UPS6 1966 aaKnown RBP13.02□□□□□ -0.32
SDCBP-212ENST00000523483 PPLO60437 1756 aa13.02□□□□□ -0.33
SDCBP-212ENST00000523483 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
SDCBP-212ENST00000523483 UBR1Q8IWV7 1749 aa13.01□□□□□ -0.33
SDCBP-212ENST00000523483 ZFYVE9O95405 1425 aa13.01□□□□□ -0.33
SDCBP-212ENST00000523483 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
SDCBP-212ENST00000523483 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
SDCBP-212ENST00000523483 PRAM1Q96QH2 718 aa13□□□□□ -0.33
SDCBP-212ENST00000523483 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
SDCBP-212ENST00000523483 NEURL4Q96JN8 1562 aa12.99□□□□□ -0.33
SDCBP-212ENST00000523483 METP08581 1390 aa12.99□□□□□ -0.33
SDCBP-212ENST00000523483 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
SDCBP-212ENST00000523483 WASHC2AQ641Q2 1341 aa12.99□□□□□ -0.33
SDCBP-212ENST00000523483 CENPJQ9HC77 1338 aaPredicted RBP12.99□□□□□ -0.33
SDCBP-212ENST00000523483 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
SDCBP-212ENST00000523483 GPRASP1Q5JY77 1395 aa12.98□□□□□ -0.33
SDCBP-212ENST00000523483 TMF1P82094 1093 aa12.97□□□□□ -0.33
SDCBP-212ENST00000523483 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
SDCBP-212ENST00000523483 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
SDCBP-212ENST00000523483 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
SDCBP-212ENST00000523483 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
SDCBP-212ENST00000523483 PLEKHG1Q9ULL1 1385 aa12.96□□□□□ -0.33
SDCBP-212ENST00000523483 C14orf37Q86TY3 774 aa12.96□□□□□ -0.34
SDCBP-212ENST00000523483 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.34
SDCBP-212ENST00000523483 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
SDCBP-212ENST00000523483 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
SDCBP-212ENST00000523483 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
SDCBP-212ENST00000523483 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
SDCBP-212ENST00000523483 TESK2Q96S53 571 aa12.94□□□□□ -0.34
SDCBP-212ENST00000523483 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
SDCBP-212ENST00000523483 DISP3Q9P2K9 1392 aa12.93□□□□□ -0.34
SDCBP-212ENST00000523483 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
SDCBP-212ENST00000523483 SLIT1O75093 1534 aa12.93□□□□□ -0.34
SDCBP-212ENST00000523483 KCNA6P17658 529 aa12.92□□□□□ -0.34
SDCBP-212ENST00000523483 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
SDCBP-212ENST00000523483 ADAMTS13Q76LX8 1427 aa12.92□□□□□ -0.34
SDCBP-212ENST00000523483 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
SDCBP-212ENST00000523483 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
SDCBP-212ENST00000523483 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
SDCBP-212ENST00000523483 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
SDCBP-212ENST00000523483 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
SDCBP-212ENST00000523483 IQGAP1P46940 1657 aa12.91□□□□□ -0.34
SDCBP-212ENST00000523483 ASXL1Q8IXJ9 1541 aa12.91□□□□□ -0.34
SDCBP-212ENST00000523483 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
SDCBP-212ENST00000523483 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
SDCBP-212ENST00000523483 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
SDCBP-212ENST00000523483 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
SDCBP-212ENST00000523483 ROBO2Q9HCK4 1378 aa12.88□□□□□ -0.35
SDCBP-212ENST00000523483 LMTK3Q96Q04 1460 aa12.88□□□□□ -0.35
SDCBP-212ENST00000523483 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
SDCBP-212ENST00000523483 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
SDCBP-212ENST00000523483 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
SDCBP-212ENST00000523483 MIER1Q8N108 512 aa12.87□□□□□ -0.35
SDCBP-212ENST00000523483 ZNF142P52746 1687 aaPredicted RBP12.87□□□□□ -0.35
SDCBP-212ENST00000523483 LAMC1P11047 1609 aa12.87□□□□□ -0.35
SDCBP-212ENST00000523483 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
SDCBP-212ENST00000523483 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
SDCBP-212ENST00000523483 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
SDCBP-212ENST00000523483 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
SDCBP-212ENST00000523483 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
SDCBP-212ENST00000523483 PANK3Q9H999 370 aa12.85□□□□□ -0.35
SDCBP-212ENST00000523483 ANP32CO43423 234 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms