RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
SKP1-211ENST00000523359 IL21Q9HBE4 155 aa10.97□□□□□ -0.65
SKP1-211ENST00000523359 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
SKP1-211ENST00000523359 ZNF516Q92618 1163 aa10.96□□□□□ -0.65
SKP1-211ENST00000523359 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
SKP1-211ENST00000523359 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
SKP1-211ENST00000523359 TMEM134Q9H6X4 195 aa10.95□□□□□ -0.66
SKP1-211ENST00000523359 COPS2P61201 443 aa10.94□□□□□ -0.66
SKP1-211ENST00000523359 HIC1Q14526 733 aa10.93□□□□□ -0.66
SKP1-211ENST00000523359 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
SKP1-211ENST00000523359 ZMYND10O75800 440 aa10.9□□□□□ -0.66
SKP1-211ENST00000523359 FECHP22830 423 aa10.9□□□□□ -0.66
SKP1-211ENST00000523359 GPR37O15354 613 aa10.89□□□□□ -0.67
SKP1-211ENST00000523359 PPP1R18Q6NYC8 613 aa10.89□□□□□ -0.67
SKP1-211ENST00000523359 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
SKP1-211ENST00000523359 PXYLP1Q8TE99 480 aa10.89□□□□□ -0.67
SKP1-211ENST00000523359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
SKP1-211ENST00000523359 GNPATO15228 680 aa10.88□□□□□ -0.67
SKP1-211ENST00000523359 OATP04181 439 aa10.88□□□□□ -0.67
SKP1-211ENST00000523359 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
SKP1-211ENST00000523359 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
SKP1-211ENST00000523359 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
SKP1-211ENST00000523359 CFHP08603 1231 aa10.86□□□□□ -0.67
SKP1-211ENST00000523359 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
SKP1-211ENST00000523359 ZPR1O75312 459 aa10.85□□□□□ -0.67
SKP1-211ENST00000523359 SLC10A3P09131 477 aa10.85□□□□□ -0.67
SKP1-211ENST00000523359 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
SKP1-211ENST00000523359 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
SKP1-211ENST00000523359 KMT5BQ4FZB7 885 aa10.84□□□□□ -0.67
SKP1-211ENST00000523359 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
SKP1-211ENST00000523359 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
SKP1-211ENST00000523359 PRKD2Q9BZL6 878 aa10.82□□□□□ -0.68
SKP1-211ENST00000523359 NLRP7Q8WX94 980 aa10.81□□□□□ -0.68
SKP1-211ENST00000523359 TLL1O43897 1013 aa10.8□□□□□ -0.68
SKP1-211ENST00000523359 KRI1Q8N9T8 703 aaKnown RBP10.8□□□□□ -0.68
SKP1-211ENST00000523359 GGCXP38435 758 aa10.78□□□□□ -0.68
SKP1-211ENST00000523359 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
SKP1-211ENST00000523359 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
SKP1-211ENST00000523359 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
SKP1-211ENST00000523359 AK7Q96M32 723 aa10.75□□□□□ -0.69
SKP1-211ENST00000523359 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
SKP1-211ENST00000523359 DDX11L8A8MPP1 907 aa10.74□□□□□ -0.69
SKP1-211ENST00000523359 PUS10Q3MIT2 529 aaKnown RBP10.74□□□□□ -0.69
SKP1-211ENST00000523359 Q6ZNB5 142 aa10.74□□□□□ -0.69
SKP1-211ENST00000523359 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
SKP1-211ENST00000523359 V9GY48 417 aaPredicted RBP10.73□□□□□ -0.69
SKP1-211ENST00000523359 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
SKP1-211ENST00000523359 NR1I2O75469 434 aa10.72□□□□□ -0.69
SKP1-211ENST00000523359 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
SKP1-211ENST00000523359 GFRA3O60609 400 aa10.71□□□□□ -0.69
SKP1-211ENST00000523359 S1PR4O95977 384 aa10.71□□□□□ -0.69
SKP1-211ENST00000523359 MAP2K5Q13163 448 aa10.71□□□□□ -0.69
SKP1-211ENST00000523359 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
SKP1-211ENST00000523359 NEUROD2Q15784 382 aa10.7□□□□□ -0.7
SKP1-211ENST00000523359 PPEF1O14829 653 aaPredicted RBP10.69□□□□□ -0.7
SKP1-211ENST00000523359 ADH1BP00325 375 aa10.69□□□□□ -0.7
SKP1-211ENST00000523359 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
SKP1-211ENST00000523359 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
SKP1-211ENST00000523359 IRF6O14896 467 aa10.67□□□□□ -0.7
SKP1-211ENST00000523359 TRIM66O15016 1216 aa10.67□□□□□ -0.7
SKP1-211ENST00000523359 FUT2Q10981 343 aa10.67□□□□□ -0.7
SKP1-211ENST00000523359 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
SKP1-211ENST00000523359 SULF1Q8IWU6 871 aa10.67□□□□□ -0.7
SKP1-211ENST00000523359 SLC6A16Q9GZN6 736 aa10.65□□□□□ -0.7
SKP1-211ENST00000523359 SLC19A1P41440 591 aa10.64□□□□□ -0.71
SKP1-211ENST00000523359 GCGRP47871 477 aa10.64□□□□□ -0.71
SKP1-211ENST00000523359 PDE4DQ08499 809 aa10.64□□□□□ -0.71
SKP1-211ENST00000523359 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
SKP1-211ENST00000523359 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
SKP1-211ENST00000523359 ATP6V1AP38606 617 aa10.63□□□□□ -0.71
SKP1-211ENST00000523359 MORN1Q5T089 497 aa10.63□□□□□ -0.71
SKP1-211ENST00000523359 SPSB2Q99619 263 aa10.63□□□□□ -0.71
SKP1-211ENST00000523359 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
SKP1-211ENST00000523359 PDZRN3Q9UPQ7 1066 aa10.62□□□□□ -0.71
SKP1-211ENST00000523359 NRG2O14511 850 aaPredicted RBP10.61□□□□□ -0.71
SKP1-211ENST00000523359 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
SKP1-211ENST00000523359 LCE2BO14633 110 aa10.6□□□□□ -0.71
SKP1-211ENST00000523359 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
SKP1-211ENST00000523359 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
SKP1-211ENST00000523359 SPRYD7Q5W111 196 aa10.59□□□□□ -0.71
SKP1-211ENST00000523359 LIAT1Q6ZQX7 453 aa10.59□□□□□ -0.71
SKP1-211ENST00000523359 THAP11Q96EK4 314 aa10.58□□□□□ -0.72
SKP1-211ENST00000523359 CD46P15529 392 aa10.57□□□□□ -0.72
SKP1-211ENST00000523359 AMHR2Q16671 573 aa10.57□□□□□ -0.72
SKP1-211ENST00000523359 TRAF7Q6Q0C0 670 aa10.57□□□□□ -0.72
SKP1-211ENST00000523359 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
SKP1-211ENST00000523359 TMEM132AQ24JP5 1023 aa10.56□□□□□ -0.72
SKP1-211ENST00000523359 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
SKP1-211ENST00000523359 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
SKP1-211ENST00000523359 TRIM67Q6ZTA4 783 aa10.55□□□□□ -0.72
SKP1-211ENST00000523359 ZNF598Q86UK7 904 aaKnown RBP10.55□□□□□ -0.72
SKP1-211ENST00000523359 GRIPAP1Q4V328 841 aa10.54□□□□□ -0.72
SKP1-211ENST00000523359 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
SKP1-211ENST00000523359 PARP9Q8IXQ6 854 aa10.54□□□□□ -0.72
SKP1-211ENST00000523359 FAM160A2Q8N612 972 aaPredicted RBP10.54□□□□□ -0.72
SKP1-211ENST00000523359 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
SKP1-211ENST00000523359 BRICD5Q6PL45 260 aa10.53□□□□□ -0.72
SKP1-211ENST00000523359 KDM4AO75164 1064 aa10.52□□□□□ -0.73
SKP1-211ENST00000523359 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
SKP1-211ENST00000523359 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms