RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 IDI1Q13907 227 aa9.52□□□□□ -0.89
PVT1-217ENST00000523190 SLC52A1Q9NWF4 448 aa9.52□□□□□ -0.89
PVT1-217ENST00000523190 MYOM2P54296 1465 aa9.52□□□□□ -0.89
PVT1-217ENST00000523190 PPLO60437 1756 aa9.51□□□□□ -0.89
PVT1-217ENST00000523190 AMER1Q5JTC6 1135 aaPredicted RBP9.51□□□□□ -0.89
PVT1-217ENST00000523190 TMEM131LA2VDJ0 1609 aa9.51□□□□□ -0.89
PVT1-217ENST00000523190 C3P01024 1663 aa9.51□□□□□ -0.89
PVT1-217ENST00000523190 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
PVT1-217ENST00000523190 MYO5BQ9ULV0 1848 aa9.5□□□□□ -0.89
PVT1-217ENST00000523190 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■□ 23.1
PVT1-217ENST00000523190 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
PVT1-217ENST00000523190 NEXMIFQ5QGS0 1516 aa9.5□□□□□ -0.89
PVT1-217ENST00000523190 TNRQ92752 1358 aa9.5□□□□□ -0.89
PVT1-217ENST00000523190 CEBPAP49715 358 aaPredicted RBP9.49□□□□□ -0.89
PVT1-217ENST00000523190 NBPF1Q3BBV0 1214 aa9.49□□□□□ -0.89
PVT1-217ENST00000523190 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
PVT1-217ENST00000523190 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
PVT1-217ENST00000523190 LAMC1P11047 1609 aa9.49□□□□□ -0.89
PVT1-217ENST00000523190 USP47Q96K76 1375 aa9.49□□□□□ -0.89
PVT1-217ENST00000523190 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
PVT1-217ENST00000523190 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
PVT1-217ENST00000523190 STAC3Q96MF2 364 aa9.48□□□□□ -0.89
PVT1-217ENST00000523190 RPGRIP1LQ68CZ1 1315 aa9.48□□□□□ -0.89
PVT1-217ENST00000523190 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
PVT1-217ENST00000523190 DIEXFQ68CQ4 756 aaKnown RBP9.47□□□□□ -0.89
PVT1-217ENST00000523190 STAG3Q9UJ98 1225 aa9.47□□□□□ -0.89
PVT1-217ENST00000523190 KIAA1210Q9ULL0 1709 aa9.47□□□□□ -0.89
PVT1-217ENST00000523190 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
PVT1-217ENST00000523190 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
PVT1-217ENST00000523190 PIK3C2GO75747 1445 aa9.46□□□□□ -0.9
PVT1-217ENST00000523190 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
PVT1-217ENST00000523190 IQGAP1P46940 1657 aa9.45□□□□□ -0.9
PVT1-217ENST00000523190 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
PVT1-217ENST00000523190 ZFYVE9O95405 1425 aa9.44□□□□□ -0.9
PVT1-217ENST00000523190 RIMS2Q9UQ26 1411 aa9.44□□□□□ -0.9
PVT1-217ENST00000523190 NLRP1Q9C000 1473 aa9.44□□□□□ -0.9
PVT1-217ENST00000523190 MYO3AQ8NEV4 1616 aa9.44□□□□□ -0.9
PVT1-217ENST00000523190 UBR1Q8IWV7 1749 aa9.44□□□□□ -0.9
PVT1-217ENST00000523190 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
PVT1-217ENST00000523190 KDM5AP29375 1690 aaKnown RBP9.42□□□□□ -0.9
PVT1-217ENST00000523190 SETBP1Q9Y6X0 1596 aa9.42□□□□□ -0.9
PVT1-217ENST00000523190 SCAF11Q99590 1463 aaKnown RBP9.42□□□□□ -0.9
PVT1-217ENST00000523190 ST20-MTHFSA0A0A6YYL1 179 aa9.42□□□□□ -0.9
PVT1-217ENST00000523190 C11orf95C9JLR9 678 aaPredicted RBP9.42□□□□□ -0.9
PVT1-217ENST00000523190 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
PVT1-217ENST00000523190 ATXN8OSP0DMR3 200 aa9.42□□□□□ -0.9
PVT1-217ENST00000523190 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
PVT1-217ENST00000523190 CCDC7Q96M83 1385 aa9.41□□□□□ -0.9
PVT1-217ENST00000523190 WASHC2AQ641Q2 1341 aa9.41□□□□□ -0.9
PVT1-217ENST00000523190 HOXD11P31277 338 aaPredicted RBP9.41□□□□□ -0.9
PVT1-217ENST00000523190 DDX10Q13206 875 aaKnown RBP9.41□□□□□ -0.9
PVT1-217ENST00000523190 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
PVT1-217ENST00000523190 ADGRB1O14514 1584 aa9.41□□□□□ -0.9
PVT1-217ENST00000523190 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
PVT1-217ENST00000523190 KIF7Q2M1P5 1343 aa9.4□□□□□ -0.9
PVT1-217ENST00000523190 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
PVT1-217ENST00000523190 CEP170BQ9Y4F5 1589 aaPredicted RBP9.39□□□□□ -0.91
PVT1-217ENST00000523190 DMRT2Q9Y5R5 561 aa9.39□□□□□ -0.91
PVT1-217ENST00000523190 PTPRMP28827 1452 aa9.39□□□□□ -0.91
PVT1-217ENST00000523190 EIF3AQ14152 1382 aaKnown RBP9.38□□□□□ -0.91
PVT1-217ENST00000523190 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
PVT1-217ENST00000523190 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
PVT1-217ENST00000523190 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
PVT1-217ENST00000523190 POLR3GLQ9BT43 218 aa9.38□□□□□ -0.91
PVT1-217ENST00000523190 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
PVT1-217ENST00000523190 SLIT1O75093 1534 aa9.37□□□□□ -0.91
PVT1-217ENST00000523190 SETD1AO15047 1707 aaKnown RBP9.37□□□□□ -0.91
PVT1-217ENST00000523190 ZNF142P52746 1687 aaPredicted RBP9.37□□□□□ -0.91
PVT1-217ENST00000523190 ARHGAP23Q9P227 1491 aa9.37□□□□□ -0.91
PVT1-217ENST00000523190 TESK2Q96S53 571 aa9.37□□□□□ -0.91
PVT1-217ENST00000523190 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
PVT1-217ENST00000523190 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
PVT1-217ENST00000523190 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
PVT1-217ENST00000523190 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
PVT1-217ENST00000523190 LTKP29376 864 aa9.35□□□□□ -0.91
PVT1-217ENST00000523190 HDGFP51858 240 aaKnown RBP9.35□□□□□ -0.91
PVT1-217ENST00000523190 MIER1Q8N108 512 aa9.35□□□□□ -0.91
PVT1-217ENST00000523190 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
PVT1-217ENST00000523190 YTHDC2Q9H6S0 1430 aaKnown RBP9.34□□□□□ -0.91
PVT1-217ENST00000523190 TMF1P82094 1093 aa9.34□□□□□ -0.91
PVT1-217ENST00000523190 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
PVT1-217ENST00000523190 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
PVT1-217ENST00000523190 PLEKHG1Q9ULL1 1385 aa9.34□□□□□ -0.91
PVT1-217ENST00000523190 CENPJQ9HC77 1338 aaPredicted RBP9.33□□□□□ -0.92
PVT1-217ENST00000523190 ADAMTS13Q76LX8 1427 aa9.33□□□□□ -0.92
PVT1-217ENST00000523190 BCANQ96GW7 911 aa9.33□□□□□ -0.92
PVT1-217ENST00000523190 STK26Q9P289 416 aa9.33□□□□□ -0.92
PVT1-217ENST00000523190 EID1Q9Y6B2 187 aa9.33□□□□□ -0.92
PVT1-217ENST00000523190 METP08581 1390 aa9.32□□□□□ -0.92
PVT1-217ENST00000523190 SBNO2Q9Y2G9 1366 aa9.32□□□□□ -0.92
PVT1-217ENST00000523190 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
PVT1-217ENST00000523190 DLC1Q96QB1 1528 aa9.31□□□□□ -0.92
PVT1-217ENST00000523190 MED14O60244 1454 aa9.3□□□□□ -0.92
PVT1-217ENST00000523190 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
PVT1-217ENST00000523190 KNDC1Q76NI1 1749 aa9.3□□□□□ -0.92
PVT1-217ENST00000523190 SETD1BQ9UPS6 1966 aaKnown RBP9.3□□□□□ -0.92
PVT1-217ENST00000523190 DIP2AQ14689 1571 aa9.29□□□□□ -0.92
PVT1-217ENST00000523190 ANP32CO43423 234 aa9.29□□□□□ -0.92
PVT1-217ENST00000523190 SAFB2Q14151 953 aaKnown RBP eCLIP9.29□□□□□ -0.92
PVT1-217ENST00000523190 PRAM1Q96QH2 718 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms