RNA–Protein interactions for RNA: ENST00000523094.5

CLINT1-206, Transcript of clathrin interactor 1, humanhuman

TSL 2 BASIC

Gene CLINT1, Length 3,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-206ENST00000523094 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
CLINT1-206ENST00000523094 CDC42BPBQ9Y5S2 1711 aa16.06■□□□□ 0.16
CLINT1-206ENST00000523094 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
CLINT1-206ENST00000523094 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
CLINT1-206ENST00000523094 RNF17Q9BXT8 1623 aaKnown RBP16.05■□□□□ 0.16
CLINT1-206ENST00000523094 CLASP1Q7Z460 1538 aa16.05■□□□□ 0.16
CLINT1-206ENST00000523094 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
CLINT1-206ENST00000523094 IQGAP3Q86VI3 1631 aa16.04■□□□□ 0.16
CLINT1-206ENST00000523094 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-206ENST00000523094 MAST1Q9Y2H9 1570 aa16.03■□□□□ 0.16
CLINT1-206ENST00000523094 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.16
CLINT1-206ENST00000523094 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.15
CLINT1-206ENST00000523094 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.15
CLINT1-206ENST00000523094 ATP10AO60312 1499 aa16.01■□□□□ 0.15
CLINT1-206ENST00000523094 PIK3C2GO75747 1445 aa16■□□□□ 0.15
CLINT1-206ENST00000523094 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
CLINT1-206ENST00000523094 NKTRP30414 1462 aaKnown RBP15.99■□□□□ 0.15
CLINT1-206ENST00000523094 SYNMO15061 1565 aa15.99■□□□□ 0.15
CLINT1-206ENST00000523094 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
CLINT1-206ENST00000523094 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
CLINT1-206ENST00000523094 HSP90AA1P07900 732 aaKnown RBP15.98■□□□□ 0.15
CLINT1-206ENST00000523094 IQGAP1P46940 1657 aa15.98■□□□□ 0.15
CLINT1-206ENST00000523094 BCAR3O75815 825 aa15.98■□□□□ 0.15
CLINT1-206ENST00000523094 PLXNC1O60486 1568 aa15.97■□□□□ 0.15
CLINT1-206ENST00000523094 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
CLINT1-206ENST00000523094 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
CLINT1-206ENST00000523094 IGHDP01880 384 aa15.96■□□□□ 0.15
CLINT1-206ENST00000523094 CDCA8Q53HL2 280 aa15.96■□□□□ 0.15
CLINT1-206ENST00000523094 USP19O94966 1318 aa15.96■□□□□ 0.15
CLINT1-206ENST00000523094 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
CLINT1-206ENST00000523094 MADDQ8WXG6 1647 aa15.96■□□□□ 0.15
CLINT1-206ENST00000523094 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
CLINT1-206ENST00000523094 APAF1O14727 1248 aa15.95■□□□□ 0.14
CLINT1-206ENST00000523094 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
CLINT1-206ENST00000523094 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
CLINT1-206ENST00000523094 E9PSI1 815 aa15.94■□□□□ 0.14
CLINT1-206ENST00000523094 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
CLINT1-206ENST00000523094 NPC1L1Q9UHC9 1359 aa15.94■□□□□ 0.14
CLINT1-206ENST00000523094 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
CLINT1-206ENST00000523094 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLINT1-206ENST00000523094 FAM43AQ8N2R8 423 aa15.93■□□□□ 0.14
CLINT1-206ENST00000523094 MYOM1P52179 1685 aa15.93■□□□□ 0.14
CLINT1-206ENST00000523094 NAP1L5Q96NT1 182 aaPredicted RBP15.93■□□□□ 0.14
CLINT1-206ENST00000523094 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
CLINT1-206ENST00000523094 GLIPR1L2Q4G1C9 344 aa15.92■□□□□ 0.14
CLINT1-206ENST00000523094 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
CLINT1-206ENST00000523094 CGNL1Q0VF96 1302 aa15.92■□□□□ 0.14
CLINT1-206ENST00000523094 SEC24BO95487 1268 aa15.92■□□□□ 0.14
CLINT1-206ENST00000523094 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
CLINT1-206ENST00000523094 MAPK8IP3Q9UPT6 1336 aa15.91■□□□□ 0.14
CLINT1-206ENST00000523094 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
CLINT1-206ENST00000523094 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
CLINT1-206ENST00000523094 BECN1Q14457 450 aa15.9■□□□□ 0.14
CLINT1-206ENST00000523094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLINT1-206ENST00000523094 CLUAP1Q96AJ1 413 aa15.9■□□□□ 0.14
CLINT1-206ENST00000523094 SCAPERQ9BY12 1400 aa15.89■□□□□ 0.13
CLINT1-206ENST00000523094 POGKQ9P215 609 aa15.89■□□□□ 0.13
CLINT1-206ENST00000523094 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
CLINT1-206ENST00000523094 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
CLINT1-206ENST00000523094 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
CLINT1-206ENST00000523094 CENPJQ9HC77 1338 aaPredicted RBP15.88■□□□□ 0.13
CLINT1-206ENST00000523094 PANK1Q8TE04 598 aa15.87■□□□□ 0.13
CLINT1-206ENST00000523094 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
CLINT1-206ENST00000523094 NLRP1Q9C000 1473 aa15.87■□□□□ 0.13
CLINT1-206ENST00000523094 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
CLINT1-206ENST00000523094 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
CLINT1-206ENST00000523094 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
CLINT1-206ENST00000523094 GZF1Q9H116 711 aaPredicted RBP15.85■□□□□ 0.13
CLINT1-206ENST00000523094 TRPM2O94759 1503 aa15.84■□□□□ 0.13
CLINT1-206ENST00000523094 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
CLINT1-206ENST00000523094 CEP152O94986 1710 aa15.84■□□□□ 0.13
CLINT1-206ENST00000523094 STAC3Q96MF2 364 aa15.84■□□□□ 0.13
CLINT1-206ENST00000523094 WWC1Q8IX03 1113 aa15.83■□□□□ 0.12
CLINT1-206ENST00000523094 UBE2Q2Q8WVN8 375 aa15.83■□□□□ 0.12
CLINT1-206ENST00000523094 ANTXR1Q9H6X2 564 aa15.83■□□□□ 0.12
CLINT1-206ENST00000523094 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
CLINT1-206ENST00000523094 L1TD1Q5T7N2 865 aaKnown RBP15.81■□□□□ 0.12
CLINT1-206ENST00000523094 PMFBP1Q8TBY8 1022 aa15.81■□□□□ 0.12
CLINT1-206ENST00000523094 CLTCL1P53675 1640 aa15.81■□□□□ 0.12
CLINT1-206ENST00000523094 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
CLINT1-206ENST00000523094 CARD14Q9BXL6 1004 aa15.81■□□□□ 0.12
CLINT1-206ENST00000523094 TBC1D32Q96NH3 1257 aa15.8■□□□□ 0.12
CLINT1-206ENST00000523094 ERVK-7P63135 1459 aa15.8■□□□□ 0.12
CLINT1-206ENST00000523094 PTPRTO14522 1441 aa15.79■□□□□ 0.12
CLINT1-206ENST00000523094 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
CLINT1-206ENST00000523094 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
CLINT1-206ENST00000523094 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
CLINT1-206ENST00000523094 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
CLINT1-206ENST00000523094 KIAA1210Q9ULL0 1709 aa15.78■□□□□ 0.12
CLINT1-206ENST00000523094 AAMPQ13685 434 aa15.78■□□□□ 0.12
CLINT1-206ENST00000523094 TBC1D2Q9BYX2 928 aa15.78■□□□□ 0.12
CLINT1-206ENST00000523094 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
CLINT1-206ENST00000523094 TRIM44Q96DX7 344 aaPredicted RBP15.77■□□□□ 0.12
CLINT1-206ENST00000523094 PDZRN3Q9UPQ7 1066 aa15.77■□□□□ 0.12
CLINT1-206ENST00000523094 TPRNQ4KMQ1 711 aa15.77■□□□□ 0.11
CLINT1-206ENST00000523094 RRAGDQ9NQL2 400 aaPredicted RBP15.77■□□□□ 0.11
CLINT1-206ENST00000523094 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
CLINT1-206ENST00000523094 RLBP1P12271 317 aa15.76■□□□□ 0.11
CLINT1-206ENST00000523094 TNNQ9UQP3 1299 aa15.76■□□□□ 0.11
CLINT1-206ENST00000523094 TRAPPC8Q9Y2L5 1435 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms