RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 MTMR7Q9Y216 660 aa10.32□□□□□ -0.76
HMGB4-204ENST00000522796 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
HMGB4-204ENST00000522796 GABPB1Q06547 395 aaPredicted RBP10.31□□□□□ -0.76
HMGB4-204ENST00000522796 ATP2B3Q16720 1220 aa10.31□□□□□ -0.76
HMGB4-204ENST00000522796 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
HMGB4-204ENST00000522796 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
HMGB4-204ENST00000522796 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
HMGB4-204ENST00000522796 ZKSCAN8Q15776 578 aaPredicted RBP10.3□□□□□ -0.76
HMGB4-204ENST00000522796 SIRT1Q96EB6 747 aa10.3□□□□□ -0.76
HMGB4-204ENST00000522796 CT47A1Q5JQC4 288 aaPredicted RBP10.3□□□□□ -0.76
HMGB4-204ENST00000522796 NCAPGQ9BPX3 1015 aa10.3□□□□□ -0.76
HMGB4-204ENST00000522796 CCDC172P0C7W6 258 aa10.29□□□□□ -0.76
HMGB4-204ENST00000522796 DNAJC14Q6Y2X3 702 aaPredicted RBP10.29□□□□□ -0.76
HMGB4-204ENST00000522796 KCTD17Q8N5Z5 321 aa10.29□□□□□ -0.76
HMGB4-204ENST00000522796 CALCOCO1Q9P1Z2 691 aa10.29□□□□□ -0.76
HMGB4-204ENST00000522796 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
HMGB4-204ENST00000522796 SPTY2D1Q68D10 685 aaPredicted RBP10.29□□□□□ -0.76
HMGB4-204ENST00000522796 SMC4Q9NTJ3 1288 aa10.29□□□□□ -0.76
HMGB4-204ENST00000522796 BORCS6Q96GS4 357 aa10.28□□□□□ -0.76
HMGB4-204ENST00000522796 POLD1P28340 1107 aa10.28□□□□□ -0.76
HMGB4-204ENST00000522796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.27□□□□□ -0.77
HMGB4-204ENST00000522796 MCM4P33991 863 aa10.27□□□□□ -0.77
HMGB4-204ENST00000522796 CTR9Q6PD62 1173 aa10.27□□□□□ -0.77
HMGB4-204ENST00000522796 MTA1Q13330 715 aa10.27□□□□□ -0.77
HMGB4-204ENST00000522796 MYRIPQ8NFW9 859 aa10.27□□□□□ -0.77
HMGB4-204ENST00000522796 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
HMGB4-204ENST00000522796 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
HMGB4-204ENST00000522796 MAPKBP1O60336 1514 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 TRAK2O60296 914 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 FAM161AQ3B820 660 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 NOL7Q9UMY1 257 aaKnown RBP10.26□□□□□ -0.77
HMGB4-204ENST00000522796 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 MLECQ14165 292 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
HMGB4-204ENST00000522796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGB4-204ENST00000522796 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
HMGB4-204ENST00000522796 MCM5P33992 734 aa10.25□□□□□ -0.77
HMGB4-204ENST00000522796 GTF2F1P35269 517 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMGB4-204ENST00000522796 ANKRD23Q86SG2 305 aa10.25□□□□□ -0.77
HMGB4-204ENST00000522796 GTF2A1P52655 376 aaPredicted RBP10.25□□□□□ -0.77
HMGB4-204ENST00000522796 TSPAN18Q96SJ8 248 aa10.25□□□□□ -0.77
HMGB4-204ENST00000522796 FEZ1Q99689 392 aa10.25□□□□□ -0.77
HMGB4-204ENST00000522796 FEZ2Q9UHY8 353 aaPredicted RBP10.25□□□□□ -0.77
HMGB4-204ENST00000522796 BRMS1Q9HCU9 246 aa10.24□□□□□ -0.77
HMGB4-204ENST00000522796 KIF16BQ96L93 1317 aa10.24□□□□□ -0.77
HMGB4-204ENST00000522796 NRDCO43847 1150 aa10.24□□□□□ -0.77
HMGB4-204ENST00000522796 MYBPC2Q14324 1141 aa10.24□□□□□ -0.77
HMGB4-204ENST00000522796 TNNT3P45378 269 aaPredicted RBP10.23□□□□□ -0.77
HMGB4-204ENST00000522796 NOP2P46087 812 aaKnown RBP10.23□□□□□ -0.77
HMGB4-204ENST00000522796 C8orf34Q49A92 452 aa10.23□□□□□ -0.77
HMGB4-204ENST00000522796 RIPOR2Q9Y4F9 1068 aa10.23□□□□□ -0.77
HMGB4-204ENST00000522796 HDAC1Q13547 482 aaPredicted RBP10.22□□□□□ -0.77
HMGB4-204ENST00000522796 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
HMGB4-204ENST00000522796 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
HMGB4-204ENST00000522796 PRIMPOLQ96LW4 560 aa10.22□□□□□ -0.77
HMGB4-204ENST00000522796 CADPSQ9ULU8 1353 aa10.22□□□□□ -0.77
HMGB4-204ENST00000522796 KIF1CO43896 1103 aaKnown RBP10.22□□□□□ -0.77
HMGB4-204ENST00000522796 CT47B1P0C2W7 299 aaPredicted RBP10.22□□□□□ -0.77
HMGB4-204ENST00000522796 DONSONQ9NYP3 566 aa10.22□□□□□ -0.77
HMGB4-204ENST00000522796 PRDM2Q13029 1718 aa10.21□□□□□ -0.77
HMGB4-204ENST00000522796 SLFN14P0C7P3 912 aa10.21□□□□□ -0.77
HMGB4-204ENST00000522796 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.77
HMGB4-204ENST00000522796 ITFG2Q969R8 447 aa10.21□□□□□ -0.77
HMGB4-204ENST00000522796 IPO8O15397 1037 aaKnown RBP10.21□□□□□ -0.78
HMGB4-204ENST00000522796 HMGN5P82970 282 aaKnown RBP10.21□□□□□ -0.78
HMGB4-204ENST00000522796 SETDB1Q15047 1291 aa10.21□□□□□ -0.78
HMGB4-204ENST00000522796 EXOC6Q8TAG9 804 aa10.21□□□□□ -0.78
HMGB4-204ENST00000522796 OGFRQ9NZT2 677 aa10.21□□□□□ -0.78
HMGB4-204ENST00000522796 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
HMGB4-204ENST00000522796 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
HMGB4-204ENST00000522796 RRP1P56182 461 aaKnown RBP10.2□□□□□ -0.78
HMGB4-204ENST00000522796 BRD1O95696 1058 aa10.2□□□□□ -0.78
HMGB4-204ENST00000522796 ICE2Q659A1 982 aa10.2□□□□□ -0.78
HMGB4-204ENST00000522796 PANK3Q9H999 370 aa10.2□□□□□ -0.78
HMGB4-204ENST00000522796 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
HMGB4-204ENST00000522796 CREBRFQ8IUR6 639 aa10.19□□□□□ -0.78
HMGB4-204ENST00000522796 PDCL2Q8N4E4 241 aa10.19□□□□□ -0.78
HMGB4-204ENST00000522796 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
HMGB4-204ENST00000522796 SLKQ9H2G2 1235 aaPredicted RBP10.19□□□□□ -0.78
HMGB4-204ENST00000522796 KTN1Q86UP2 1357 aaKnown RBP10.19□□□□□ -0.78
HMGB4-204ENST00000522796 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
HMGB4-204ENST00000522796 SCP2P22307 547 aa10.18□□□□□ -0.78
HMGB4-204ENST00000522796 UPF2Q9HAU5 1272 aaKnown RBP10.18□□□□□ -0.78
HMGB4-204ENST00000522796 ZKSCAN5Q9Y2L8 839 aa10.18□□□□□ -0.78
HMGB4-204ENST00000522796 RAD50Q92878 1312 aa10.18□□□□□ -0.78
HMGB4-204ENST00000522796 DHX16O60231 1041 aaKnown RBP10.18□□□□□ -0.78
HMGB4-204ENST00000522796 GUCY2CP25092 1073 aa10.18□□□□□ -0.78
HMGB4-204ENST00000522796 NASPP49321 788 aaPredicted RBP10.18□□□□□ -0.78
HMGB4-204ENST00000522796 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.18□□□□□ -0.78
HMGB4-204ENST00000522796 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
HMGB4-204ENST00000522796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGB4-204ENST00000522796 MKL1Q969V6 931 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 MPHOSPH10O00566 681 aaKnown RBP10.17□□□□□ -0.78
HMGB4-204ENST00000522796 ZNF853P0CG23 659 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 CCDC184Q52MB2 194 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 GAS2L3Q86XJ1 694 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 SDR16C5Q8N3Y7 309 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 MNS1Q8NEH6 495 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms