RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-222ENST00000522476 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
NDRG1-222ENST00000522476 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
NDRG1-222ENST00000522476 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
NDRG1-222ENST00000522476 CEP152O94986 1710 aa18.22■□□□□ 0.51
NDRG1-222ENST00000522476 RGL3Q3MIN7 710 aa18.22■□□□□ 0.51
NDRG1-222ENST00000522476 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.51
NDRG1-222ENST00000522476 SRCAPQ6ZRS2 3230 aa18.2■□□□□ 0.5
NDRG1-222ENST00000522476 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
NDRG1-222ENST00000522476 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
NDRG1-222ENST00000522476 KTN1Q86UP2 1357 aaKnown RBP18.18■□□□□ 0.5
NDRG1-222ENST00000522476 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
NDRG1-222ENST00000522476 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
NDRG1-222ENST00000522476 CLTCL1P53675 1640 aa18.16■□□□□ 0.5
NDRG1-222ENST00000522476 ST20-MTHFSA0A0A6YYL1 179 aa18.16■□□□□ 0.5
NDRG1-222ENST00000522476 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
NDRG1-222ENST00000522476 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
NDRG1-222ENST00000522476 MYOM2P54296 1465 aa18.15■□□□□ 0.5
NDRG1-222ENST00000522476 C3P01024 1663 aa18.14■□□□□ 0.49
NDRG1-222ENST00000522476 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
NDRG1-222ENST00000522476 KIAA1210Q9ULL0 1709 aa18.12■□□□□ 0.49
NDRG1-222ENST00000522476 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
NDRG1-222ENST00000522476 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
NDRG1-222ENST00000522476 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
NDRG1-222ENST00000522476 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
NDRG1-222ENST00000522476 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
NDRG1-222ENST00000522476 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
NDRG1-222ENST00000522476 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
NDRG1-222ENST00000522476 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
NDRG1-222ENST00000522476 TMF1P82094 1093 aa18.1■□□□□ 0.49
NDRG1-222ENST00000522476 KIF1BO60333 1816 aa18.1■□□□□ 0.49
NDRG1-222ENST00000522476 ABCC3O15438 1527 aa18.09■□□□□ 0.49
NDRG1-222ENST00000522476 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
NDRG1-222ENST00000522476 NBPF1Q3BBV0 1214 aa18.07■□□□□ 0.48
NDRG1-222ENST00000522476 GGT6Q6P531 493 aa18.07■□□□□ 0.48
NDRG1-222ENST00000522476 REREQ9P2R6 1566 aa18.07■□□□□ 0.48
NDRG1-222ENST00000522476 NPATQ14207 1427 aa18.06■□□□□ 0.48
NDRG1-222ENST00000522476 RALBP1Q15311 655 aa18.05■□□□□ 0.48
NDRG1-222ENST00000522476 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
NDRG1-222ENST00000522476 ADGRB3O60242 1522 aa18.05■□□□□ 0.48
NDRG1-222ENST00000522476 NOS1P29475 1434 aa18.04■□□□□ 0.48
NDRG1-222ENST00000522476 CPS1P31327 1500 aa18.03■□□□□ 0.48
NDRG1-222ENST00000522476 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
NDRG1-222ENST00000522476 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
NDRG1-222ENST00000522476 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
NDRG1-222ENST00000522476 AGLP35573 1532 aa18.02■□□□□ 0.48
NDRG1-222ENST00000522476 IQGAP1P46940 1657 aa18.02■□□□□ 0.48
NDRG1-222ENST00000522476 TESK2Q96S53 571 aa18.02■□□□□ 0.47
NDRG1-222ENST00000522476 UPF1Q92900 1129 aaKnown RBP eCLIP18.01■□□□□ 0.471e-7■■■■■ 38.9
NDRG1-222ENST00000522476 SLC52A1Q9NWF4 448 aa18.01■□□□□ 0.47
NDRG1-222ENST00000522476 IFT172Q9UG01 1749 aa17.99■□□□□ 0.47
NDRG1-222ENST00000522476 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
NDRG1-222ENST00000522476 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
NDRG1-222ENST00000522476 PIK3C2BO00750 1634 aa17.96■□□□□ 0.47
NDRG1-222ENST00000522476 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
NDRG1-222ENST00000522476 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
NDRG1-222ENST00000522476 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
NDRG1-222ENST00000522476 UGGT1Q9NYU2 1555 aa17.95■□□□□ 0.46
NDRG1-222ENST00000522476 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
NDRG1-222ENST00000522476 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
NDRG1-222ENST00000522476 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
NDRG1-222ENST00000522476 ZFYVE9O95405 1425 aa17.93■□□□□ 0.46
NDRG1-222ENST00000522476 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
NDRG1-222ENST00000522476 MROH2AA6NES4 1674 aa17.92■□□□□ 0.46
NDRG1-222ENST00000522476 NEFLP07196 543 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 PIK3C2GO75747 1445 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 PPLO60437 1756 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
NDRG1-222ENST00000522476 C14orf93Q9H972 538 aaKnown RBP17.91■□□□□ 0.46
NDRG1-222ENST00000522476 SYNMO15061 1565 aa17.9■□□□□ 0.46
NDRG1-222ENST00000522476 PARD3Q8TEW0 1356 aa17.89■□□□□ 0.45
NDRG1-222ENST00000522476 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
NDRG1-222ENST00000522476 CFAP70Q5T0N1 1121 aa17.89■□□□□ 0.45
NDRG1-222ENST00000522476 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
NDRG1-222ENST00000522476 CEP170BQ9Y4F5 1589 aaPredicted RBP17.88■□□□□ 0.45
NDRG1-222ENST00000522476 PER1O15534 1290 aaPredicted RBP17.88■□□□□ 0.45
NDRG1-222ENST00000522476 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
NDRG1-222ENST00000522476 INSRP06213 1382 aa17.88■□□□□ 0.45
NDRG1-222ENST00000522476 ZNF142P52746 1687 aaPredicted RBP17.86■□□□□ 0.45
NDRG1-222ENST00000522476 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
NDRG1-222ENST00000522476 PANK3Q9H999 370 aa17.86■□□□□ 0.45
NDRG1-222ENST00000522476 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
NDRG1-222ENST00000522476 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
NDRG1-222ENST00000522476 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
NDRG1-222ENST00000522476 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
NDRG1-222ENST00000522476 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
NDRG1-222ENST00000522476 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
NDRG1-222ENST00000522476 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
NDRG1-222ENST00000522476 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.45
NDRG1-222ENST00000522476 IDI1Q13907 227 aa17.82■□□□□ 0.44
NDRG1-222ENST00000522476 SUPT16HQ9Y5B9 1047 aaKnown RBP17.82■□□□□ 0.44
NDRG1-222ENST00000522476 LRPPRCP42704 1394 aaKnown RBP17.81■□□□□ 0.44
NDRG1-222ENST00000522476 ADGRB1O14514 1584 aa17.81■□□□□ 0.44
NDRG1-222ENST00000522476 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
NDRG1-222ENST00000522476 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
NDRG1-222ENST00000522476 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
NDRG1-222ENST00000522476 LRRC7Q96NW7 1537 aa17.76■□□□□ 0.43
NDRG1-222ENST00000522476 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms