RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	SOCS7	O14512	581 aa		11.81	□□□□□ -0.52
SPIDR-215	ENST00000521798	WWC1	Q8IX03	1113 aa		11.81	□□□□□ -0.52
SPIDR-215	ENST00000521798	TTC13	Q8NBP0	860 aa		11.81	□□□□□ -0.52
SPIDR-215	ENST00000521798	JPH4	Q96JJ6	628 aa		11.81	□□□□□ -0.52
SPIDR-215	ENST00000521798	GDPD2	Q9HCC8	539 aa		11.8	□□□□□ -0.52
SPIDR-215	ENST00000521798	THOC2	Q8NI27	1593 aa	Known RBP	11.79	□□□□□ -0.52
SPIDR-215	ENST00000521798	CUX2	O14529	1486 aa		11.79	□□□□□ -0.52
SPIDR-215	ENST00000521798	IRF5	Q13568	498 aa		11.79	□□□□□ -0.52
SPIDR-215	ENST00000521798	TUSC1	Q2TAM9	212 aa		11.79	□□□□□ -0.52
SPIDR-215	ENST00000521798	FANCD2	Q9BXW9	1451 aa		11.78	□□□□□ -0.52
SPIDR-215	ENST00000521798	SEC24B	O95487	1268 aa		11.78	□□□□□ -0.52
SPIDR-215	ENST00000521798	RIC3	Q7Z5B4	369 aa		11.78	□□□□□ -0.52
SPIDR-215	ENST00000521798	COLQ	Q9Y215	455 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIDR-215	ENST00000521798	TMCO4	Q5TGY1	634 aa		11.76	□□□□□ -0.53
SPIDR-215	ENST00000521798	SPIRE2	Q8WWL2	714 aa		11.76	□□□□□ -0.53
SPIDR-215	ENST00000521798	CALR3	Q96L12	384 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-215	ENST00000521798	CEP164	Q9UPV0	1460 aa		11.76	□□□□□ -0.53
SPIDR-215	ENST00000521798	PDE4C	Q08493	712 aa		11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	C6orf132	Q5T0Z8	1188 aa		11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	C3orf67	Q6ZVT6	689 aa		11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	RGS22	Q8NE09	1264 aa		11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	RBM46	Q8TBY0	533 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	PCDHGA4	Q9Y5G9	962 aa		11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	MRC2	Q9UBG0	1479 aa		11.75	□□□□□ -0.53
SPIDR-215	ENST00000521798	SPTLC1	O15269	473 aa		11.74	□□□□□ -0.53
SPIDR-215	ENST00000521798	GLMN	Q92990	594 aa		11.74	□□□□□ -0.53
SPIDR-215	ENST00000521798	PRM3	Q9NNZ6	103 aa		11.74	□□□□□ -0.53
SPIDR-215	ENST00000521798	KDM4F	A0A1W2PPD8	638 aa		11.73	□□□□□ -0.53
SPIDR-215	ENST00000521798	ABL2	P42684	1182 aa		11.73	□□□□□ -0.53
SPIDR-215	ENST00000521798	FOSB	P53539	338 aa		11.73	□□□□□ -0.53
SPIDR-215	ENST00000521798	ACIN1	Q9UKV3	1341 aa	Known RBP	11.72	□□□□□ -0.53
SPIDR-215	ENST00000521798	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.72	□□□□□ -0.53
SPIDR-215	ENST00000521798	GZF1	Q9H116	711 aa	Predicted RBP	11.72	□□□□□ -0.53
SPIDR-215	ENST00000521798	PRDM2	Q13029	1718 aa		11.72	□□□□□ -0.53
SPIDR-215	ENST00000521798	WDR62	O43379	1518 aa		11.71	□□□□□ -0.53
SPIDR-215	ENST00000521798	POM121C	A8CG34	1229 aa		11.71	□□□□□ -0.53
SPIDR-215	ENST00000521798	CD46	P15529	392 aa		11.71	□□□□□ -0.53
SPIDR-215	ENST00000521798	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.71	□□□□□ -0.53
SPIDR-215	ENST00000521798	TBC1D2B	Q9UPU7	963 aa		11.71	□□□□□ -0.53
SPIDR-215	ENST00000521798	PRSS12	P56730	875 aa		11.7	□□□□□ -0.54
SPIDR-215	ENST00000521798	MFAP1	P55081	439 aa	Known RBP	11.69	□□□□□ -0.54
SPIDR-215	ENST00000521798	ZDHHC16	Q969W1	377 aa		11.69	□□□□□ -0.54
SPIDR-215	ENST00000521798	PATL2	C9JE40	543 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-215	ENST00000521798	GJA5	P36382	358 aa		11.68	□□□□□ -0.54
SPIDR-215	ENST00000521798	MTMR7	Q9Y216	660 aa		11.68	□□□□□ -0.54
SPIDR-215	ENST00000521798	URB2	Q14146	1524 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-215	ENST00000521798	EVX2	Q03828	476 aa		11.67	□□□□□ -0.54
SPIDR-215	ENST00000521798	CDCA7L	Q96GN5	454 aa		11.67	□□□□□ -0.54
SPIDR-215	ENST00000521798	LILRB3	O75022	631 aa		11.66	□□□□□ -0.54
SPIDR-215	ENST00000521798	QPCT	Q16769	361 aa		11.66	□□□□□ -0.54
SPIDR-215	ENST00000521798	NUTM1	Q86Y26	1132 aa		11.66	□□□□□ -0.54
SPIDR-215	ENST00000521798	PELP1	Q8IZL8	1130 aa	Known RBP	11.66	□□□□□ -0.54
SPIDR-215	ENST00000521798	POTEF	A5A3E0	1075 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	RCCD1	A6NED2	376 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	MOXD2P	A6NHM9	499 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	HAX1	O00165	279 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	AP1G2	O75843	785 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	CSPP1	Q1MSJ5	1256 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	SULF1	Q8IWU6	871 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	ZNF454	Q8N9F8	522 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	PBXIP1	Q96AQ6	731 aa		11.65	□□□□□ -0.54
SPIDR-215	ENST00000521798	USP17L8	P0C7I0	530 aa		11.64	□□□□□ -0.55
SPIDR-215	ENST00000521798	ZNF710	Q8N1W2	664 aa		11.64	□□□□□ -0.55
SPIDR-215	ENST00000521798	SLC39A7	Q92504	469 aa		11.64	□□□□□ -0.55
SPIDR-215	ENST00000521798	ADAM33	Q9BZ11	813 aa		11.63	□□□□□ -0.55
SPIDR-215	ENST00000521798	UST	Q9Y2C2	406 aa		11.63	□□□□□ -0.55
SPIDR-215	ENST00000521798	EYA1	Q99502	592 aa		11.62	□□□□□ -0.55
SPIDR-215	ENST00000521798	KCNA1	Q09470	495 aa		11.61	□□□□□ -0.55
SPIDR-215	ENST00000521798	RTL5	Q5HYW3	569 aa	Predicted RBP	11.61	□□□□□ -0.55
SPIDR-215	ENST00000521798	NDUFB9	Q9Y6M9	179 aa		11.61	□□□□□ -0.55
SPIDR-215	ENST00000521798	BRD1	O95696	1058 aa		11.6	□□□□□ -0.55
SPIDR-215	ENST00000521798	NDUFV2	P19404	249 aa		11.6	□□□□□ -0.55
SPIDR-215	ENST00000521798	GJD4	Q96KN9	370 aa	Predicted RBP	11.6	□□□□□ -0.55
SPIDR-215	ENST00000521798	FAM198A	Q9UFP1	575 aa		11.6	□□□□□ -0.55
SPIDR-215	ENST00000521798	PCDHB15	Q9Y5E8	787 aa		11.6	□□□□□ -0.55
SPIDR-215	ENST00000521798	TOPBP1	Q92547	1522 aa		11.6	□□□□□ -0.55
SPIDR-215	ENST00000521798	C7	P10643	843 aa		11.59	□□□□□ -0.55
SPIDR-215	ENST00000521798	PRPF38B	Q5VTL8	546 aa	Known RBP	11.59	□□□□□ -0.55
SPIDR-215	ENST00000521798	ADAMTS19	Q8TE59	1207 aa		11.59	□□□□□ -0.55
SPIDR-215	ENST00000521798	DDX11L8	A8MPP1	907 aa		11.58	□□□□□ -0.56
SPIDR-215	ENST00000521798	HDGFL1	Q5TGJ6	251 aa		11.58	□□□□□ -0.56
SPIDR-215	ENST00000521798	ABCC8	Q09428	1581 aa		11.58	□□□□□ -0.56
SPIDR-215	ENST00000521798	DNMBP	Q6XZF7	1577 aa		11.58	□□□□□ -0.56
SPIDR-215	ENST00000521798	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	NUTM2E	B1AL46	878 aa	Predicted RBP	11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	DNAJB2	P25686	324 aa		11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	WASHC4	Q2M389	1173 aa		11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	CFAP70	Q5T0N1	1121 aa		11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.57	□□□□□ -0.56
SPIDR-215	ENST00000521798	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.56	□□□□□ -0.56
SPIDR-215	ENST00000521798	SRPK2	P78362	688 aa	Known RBP	11.56	□□□□□ -0.56
SPIDR-215	ENST00000521798	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.56	□□□□□ -0.56
SPIDR-215	ENST00000521798	CABLES1	Q8TDN4	633 aa		11.56	□□□□□ -0.56
SPIDR-215	ENST00000521798	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.56	□□□□□ -0.56
SPIDR-215	ENST00000521798	CSB-PGBD3	P0DP91	1061 aa		11.55	□□□□□ -0.56
SPIDR-215	ENST00000521798	ZBTB3	Q9H5J0	574 aa		11.54	□□□□□ -0.56
SPIDR-215	ENST00000521798	TMEM134	Q9H6X4	195 aa		11.54	□□□□□ -0.56
SPIDR-215	ENST00000521798	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.54	□□□□□ -0.56
SPIDR-215	ENST00000521798	GPR37L1	O60883	481 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms