RNA–Protein interactions for RNA: ENST00000521782.1

TNIP1-212, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 4

Gene TNIP1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-212ENST00000521782 ROBO1Q9Y6N7 1651 aa24.21■■□□□ 1.47
TNIP1-212ENST00000521782 EFCAB6Q5THR3 1501 aa24.2■■□□□ 1.47
TNIP1-212ENST00000521782 NUP155O75694 1391 aa24.2■■□□□ 1.46
TNIP1-212ENST00000521782 TMEM94Q12767 1356 aa24.2■■□□□ 1.46
TNIP1-212ENST00000521782 TET3O43151 1660 aa24.2■■□□□ 1.46
TNIP1-212ENST00000521782 UNC13BO14795 1591 aa24.18■■□□□ 1.46
TNIP1-212ENST00000521782 LMTK2Q8IWU2 1503 aa24.17■■□□□ 1.46
TNIP1-212ENST00000521782 POTEAQ6S8J7 498 aa24.16■■□□□ 1.46
TNIP1-212ENST00000521782 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
TNIP1-212ENST00000521782 KCNA6P17658 529 aa24.13■■□□□ 1.45
TNIP1-212ENST00000521782 IDI1Q13907 227 aa24.13■■□□□ 1.45
TNIP1-212ENST00000521782 ADGRB3O60242 1522 aa24.12■■□□□ 1.45
TNIP1-212ENST00000521782 NKTRP30414 1462 aaKnown RBP24.12■■□□□ 1.45
TNIP1-212ENST00000521782 STAG3Q9UJ98 1225 aa24.11■■□□□ 1.45
TNIP1-212ENST00000521782 NOS1P29475 1434 aa24.1■■□□□ 1.45
TNIP1-212ENST00000521782 RBM33Q96EV2 1170 aaKnown RBP24.1■■□□□ 1.45
TNIP1-212ENST00000521782 SLC26A8Q96RN1 970 aa24.1■■□□□ 1.45
TNIP1-212ENST00000521782 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
TNIP1-212ENST00000521782 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
TNIP1-212ENST00000521782 PROSER2Q86WR7 435 aaPredicted RBP24.08■■□□□ 1.45
TNIP1-212ENST00000521782 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
TNIP1-212ENST00000521782 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
TNIP1-212ENST00000521782 MPHOSPH9Q99550 1183 aa24.05■■□□□ 1.44
TNIP1-212ENST00000521782 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
TNIP1-212ENST00000521782 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
TNIP1-212ENST00000521782 MSH6P52701 1360 aa24.01■■□□□ 1.43
TNIP1-212ENST00000521782 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
TNIP1-212ENST00000521782 COL16A1Q07092 1604 aaPredicted RBP24■■□□□ 1.43
TNIP1-212ENST00000521782 RPRD2Q5VT52 1461 aaKnown RBP23.98■■□□□ 1.43
TNIP1-212ENST00000521782 SLC52A1Q9NWF4 448 aa23.97■■□□□ 1.43
TNIP1-212ENST00000521782 JCADQ9P266 1359 aa23.97■■□□□ 1.43
TNIP1-212ENST00000521782 SLAIN2Q9P270 581 aa23.97■■□□□ 1.43
TNIP1-212ENST00000521782 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
TNIP1-212ENST00000521782 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
TNIP1-212ENST00000521782 E9PCH4 1651 aa23.93■■□□□ 1.42
TNIP1-212ENST00000521782 LRP6O75581 1613 aa23.93■■□□□ 1.42
TNIP1-212ENST00000521782 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
TNIP1-212ENST00000521782 BCANQ96GW7 911 aa23.91■■□□□ 1.42
TNIP1-212ENST00000521782 NCOA3Q9Y6Q9 1424 aa23.88■■□□□ 1.41
TNIP1-212ENST00000521782 FOXD1Q16676 465 aa23.88■■□□□ 1.41
TNIP1-212ENST00000521782 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
TNIP1-212ENST00000521782 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.87■■□□□ 1.41
TNIP1-212ENST00000521782 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
TNIP1-212ENST00000521782 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
TNIP1-212ENST00000521782 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
TNIP1-212ENST00000521782 TBX22Q9Y458 520 aa23.85■■□□□ 1.41
TNIP1-212ENST00000521782 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
TNIP1-212ENST00000521782 SPHKAPQ2M3C7 1700 aa23.84■■□□□ 1.41
TNIP1-212ENST00000521782 SPATA31A6Q5VVP1 1343 aa23.84■■□□□ 1.41
TNIP1-212ENST00000521782 DIP2AQ14689 1571 aa23.83■■□□□ 1.41
TNIP1-212ENST00000521782 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
TNIP1-212ENST00000521782 HDGFP51858 240 aaKnown RBP23.8■■□□□ 1.4
TNIP1-212ENST00000521782 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
TNIP1-212ENST00000521782 TRPM2O94759 1503 aa23.79■■□□□ 1.4
TNIP1-212ENST00000521782 UPF1Q92900 1129 aaKnown RBP eCLIP23.78■■□□□ 1.4
TNIP1-212ENST00000521782 PIK3R4Q99570 1358 aa23.78■■□□□ 1.4
TNIP1-212ENST00000521782 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
TNIP1-212ENST00000521782 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
TNIP1-212ENST00000521782 ZNF772Q68DY9 489 aaPredicted RBP23.76■■□□□ 1.39
TNIP1-212ENST00000521782 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
TNIP1-212ENST00000521782 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.76■■□□□ 1.39
TNIP1-212ENST00000521782 C19orf44Q9H6X5 657 aa23.76■■□□□ 1.39
TNIP1-212ENST00000521782 CHGAP10645 457 aaKnown RBP23.75■■□□□ 1.39
TNIP1-212ENST00000521782 MEX3CQ5U5Q3 659 aaKnown RBP23.75■■□□□ 1.39
TNIP1-212ENST00000521782 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
TNIP1-212ENST00000521782 PTPRUQ92729 1446 aa23.75■■□□□ 1.39
TNIP1-212ENST00000521782 CLSPNQ9HAW4 1339 aa23.74■■□□□ 1.39
TNIP1-212ENST00000521782 ATF3P18847 181 aa23.73■■□□□ 1.39
TNIP1-212ENST00000521782 BRINP3Q76B58 766 aa23.72■■□□□ 1.39
TNIP1-212ENST00000521782 XRN1Q8IZH2 1706 aaKnown RBP23.71■■□□□ 1.39
TNIP1-212ENST00000521782 NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
TNIP1-212ENST00000521782 NHSL1Q5SYE7 1610 aa23.7■■□□□ 1.39
TNIP1-212ENST00000521782 ASXL1Q8IXJ9 1541 aa23.7■■□□□ 1.38
TNIP1-212ENST00000521782 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
TNIP1-212ENST00000521782 DCCP43146 1447 aa23.69■■□□□ 1.38
TNIP1-212ENST00000521782 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
TNIP1-212ENST00000521782 KIF1BO60333 1816 aa23.68■■□□□ 1.38
TNIP1-212ENST00000521782 AMOTL2Q9Y2J4 779 aa23.68■■□□□ 1.38
TNIP1-212ENST00000521782 RXRBP28702 533 aa23.66■■□□□ 1.38
TNIP1-212ENST00000521782 NEUROD1Q13562 356 aa23.66■■□□□ 1.38
TNIP1-212ENST00000521782 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
TNIP1-212ENST00000521782 SETBP1Q9Y6X0 1596 aa23.65■■□□□ 1.38
TNIP1-212ENST00000521782 MST1RQ04912 1400 aa23.65■■□□□ 1.38
TNIP1-212ENST00000521782 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
TNIP1-212ENST00000521782 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
TNIP1-212ENST00000521782 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
TNIP1-212ENST00000521782 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
TNIP1-212ENST00000521782 AFF2P51816 1311 aa23.62■■□□□ 1.37
TNIP1-212ENST00000521782 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
TNIP1-212ENST00000521782 NALCNQ8IZF0 1738 aa23.59■■□□□ 1.37
TNIP1-212ENST00000521782 RGS12O14924 1447 aa23.59■■□□□ 1.37
TNIP1-212ENST00000521782 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
TNIP1-212ENST00000521782 METP08581 1390 aa23.56■■□□□ 1.36
TNIP1-212ENST00000521782 PNPLA6Q8IY17 1366 aa23.55■■□□□ 1.36
TNIP1-212ENST00000521782 SPATA31E1Q6ZUB1 1445 aa23.55■■□□□ 1.36
TNIP1-212ENST00000521782 ADGRL3Q9HAR2 1447 aa23.55■■□□□ 1.36
TNIP1-212ENST00000521782 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
TNIP1-212ENST00000521782 SRCAPQ6ZRS2 3230 aa23.54■■□□□ 1.36
TNIP1-212ENST00000521782 DDX17Q92841 729 aaKnown RBP23.53■■□□□ 1.36
TNIP1-212ENST00000521782 LRRC59Q96AG4 307 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms