RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
VPS13B-209ENST00000521559 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
VPS13B-209ENST00000521559 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.17
VPS13B-209ENST00000521559 FECHP22830 423 aa7.76□□□□□ -1.17
VPS13B-209ENST00000521559 MAP2K5Q13163 448 aa7.76□□□□□ -1.17
VPS13B-209ENST00000521559 MINK1Q8N4C8 1332 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-209ENST00000521559 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-209ENST00000521559 KCNC4Q03721 635 aa7.73□□□□□ -1.17
VPS13B-209ENST00000521559 KMT5BQ4FZB7 885 aa7.73□□□□□ -1.17
VPS13B-209ENST00000521559 DAXXQ9UER7 740 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-209ENST00000521559 IRF6O14896 467 aa7.72□□□□□ -1.17
VPS13B-209ENST00000521559 SULF1Q8IWU6 871 aa7.71□□□□□ -1.18
VPS13B-209ENST00000521559 KRI1Q8N9T8 703 aaKnown RBP7.71□□□□□ -1.18
VPS13B-209ENST00000521559 BCANQ96GW7 911 aa7.71□□□□□ -1.18
VPS13B-209ENST00000521559 IL21Q9HBE4 155 aa7.7□□□□□ -1.18
VPS13B-209ENST00000521559 APLP1P51693 650 aa7.69□□□□□ -1.18
VPS13B-209ENST00000521559 ZC3H15Q8WU90 426 aaKnown RBP7.68□□□□□ -1.18
VPS13B-209ENST00000521559 MTRQ99707 1265 aa7.68□□□□□ -1.18
VPS13B-209ENST00000521559 PCDHB3Q9Y5E6 796 aa7.68□□□□□ -1.18
VPS13B-209ENST00000521559 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
VPS13B-209ENST00000521559 ZMYND10O75800 440 aa7.67□□□□□ -1.18
VPS13B-209ENST00000521559 CFHP08603 1231 aa7.67□□□□□ -1.18
VPS13B-209ENST00000521559 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
VPS13B-209ENST00000521559 BARGINQ6ZT62 677 aa7.67□□□□□ -1.18
VPS13B-209ENST00000521559 RDH13Q8NBN7 331 aa7.67□□□□□ -1.18
VPS13B-209ENST00000521559 A0A0G2JS52 829 aa7.66□□□□□ -1.18
VPS13B-209ENST00000521559 DDX11L8A8MPP1 907 aa7.66□□□□□ -1.18
VPS13B-209ENST00000521559 RGS20O76081 388 aa7.66□□□□□ -1.18
VPS13B-209ENST00000521559 CCDC102AQ96A19 550 aa7.66□□□□□ -1.18
VPS13B-209ENST00000521559 SLC10A3P09131 477 aa7.65□□□□□ -1.18
VPS13B-209ENST00000521559 PHOX2BQ99453 314 aa7.65□□□□□ -1.18
VPS13B-209ENST00000521559 CLCN1P35523 988 aa7.64□□□□□ -1.19
VPS13B-209ENST00000521559 COPS2P61201 443 aa7.63□□□□□ -1.19
VPS13B-209ENST00000521559 NLRP7Q8WX94 980 aa7.63□□□□□ -1.19
VPS13B-209ENST00000521559 NR1I2O75469 434 aa7.62□□□□□ -1.19
VPS13B-209ENST00000521559 GGCXP38435 758 aa7.62□□□□□ -1.19
VPS13B-209ENST00000521559 MDM2Q00987 491 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-209ENST00000521559 GRIPAP1Q4V328 841 aa7.62□□□□□ -1.19
VPS13B-209ENST00000521559 GPCPD1Q9NPB8 672 aa7.62□□□□□ -1.19
VPS13B-209ENST00000521559 ZPR1O75312 459 aa7.61□□□□□ -1.19
VPS13B-209ENST00000521559 GCGRP47871 477 aa7.61□□□□□ -1.19
VPS13B-209ENST00000521559 BLOC1S3Q6QNY0 202 aa7.6□□□□□ -1.19
VPS13B-209ENST00000521559 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
VPS13B-209ENST00000521559 ATP6V1AP38606 617 aa7.59□□□□□ -1.19
VPS13B-209ENST00000521559 AK7Q96M32 723 aa7.59□□□□□ -1.19
VPS13B-209ENST00000521559 CD46P15529 392 aa7.58□□□□□ -1.2
VPS13B-209ENST00000521559 TTLL12Q14166 644 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-209ENST00000521559 AMHR2Q16671 573 aa7.57□□□□□ -1.2
VPS13B-209ENST00000521559 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
VPS13B-209ENST00000521559 USP46P62068 366 aa7.56□□□□□ -1.2
VPS13B-209ENST00000521559 FUT2Q10981 343 aa7.56□□□□□ -1.2
VPS13B-209ENST00000521559 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
VPS13B-209ENST00000521559 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.56□□□□□ -1.2
VPS13B-209ENST00000521559 FAM217BQ9NTX9 383 aaPredicted RBP7.56□□□□□ -1.2
VPS13B-209ENST00000521559 KDM4AO75164 1064 aa7.55□□□□□ -1.2
VPS13B-209ENST00000521559 PUS10Q3MIT2 529 aaKnown RBP7.55□□□□□ -1.2
VPS13B-209ENST00000521559 PPP1R18Q6NYC8 613 aa7.55□□□□□ -1.2
VPS13B-209ENST00000521559 ADH1BP00325 375 aa7.54□□□□□ -1.2
VPS13B-209ENST00000521559 MORN1Q5T089 497 aa7.54□□□□□ -1.2
VPS13B-209ENST00000521559 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
VPS13B-209ENST00000521559 TRIM66O15016 1216 aa7.53□□□□□ -1.2
VPS13B-209ENST00000521559 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-209ENST00000521559 Q3C1V9 767 aa7.53□□□□□ -1.2
VPS13B-209ENST00000521559 NUTM1Q86Y26 1132 aa7.53□□□□□ -1.2
VPS13B-209ENST00000521559 SALL2Q9Y467 1007 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-209ENST00000521559 FMNL1O95466 1100 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-209ENST00000521559 SPSB2Q99619 263 aa7.52□□□□□ -1.21
VPS13B-209ENST00000521559 SLC6A16Q9GZN6 736 aa7.51□□□□□ -1.21
VPS13B-209ENST00000521559 SLC27A5Q9Y2P5 690 aa7.51□□□□□ -1.21
VPS13B-209ENST00000521559 TLL1O43897 1013 aa7.5□□□□□ -1.21
VPS13B-209ENST00000521559 DIXDC1Q155Q3 683 aa7.5□□□□□ -1.21
VPS13B-209ENST00000521559 GIGYF2Q6Y7W6 1299 aaKnown RBP7.5□□□□□ -1.21
VPS13B-209ENST00000521559 SLC24A3Q9HC58 644 aa7.5□□□□□ -1.21
VPS13B-209ENST00000521559 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
VPS13B-209ENST00000521559 S1PR4O95977 384 aa7.48□□□□□ -1.21
VPS13B-209ENST00000521559 PDE4DQ08499 809 aa7.48□□□□□ -1.21
VPS13B-209ENST00000521559 PARP9Q8IXQ6 854 aa7.48□□□□□ -1.21
VPS13B-209ENST00000521559 ANKLE1Q8NAG6 615 aa7.48□□□□□ -1.21
VPS13B-209ENST00000521559 PRKD2Q9BZL6 878 aa7.48□□□□□ -1.21
VPS13B-209ENST00000521559 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-209ENST00000521559 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
VPS13B-209ENST00000521559 HOXA2O43364 376 aa7.47□□□□□ -1.21
VPS13B-209ENST00000521559 BRICD5Q6PL45 260 aa7.47□□□□□ -1.21
VPS13B-209ENST00000521559 THAP11Q96EK4 314 aa7.47□□□□□ -1.21
VPS13B-209ENST00000521559 BEGAINQ9BUH8 593 aa7.46□□□□□ -1.22
VPS13B-209ENST00000521559 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-209ENST00000521559 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
VPS13B-209ENST00000521559 SPIRE2Q8WWL2 714 aa7.44□□□□□ -1.22
VPS13B-209ENST00000521559 USB1Q9BQ65 265 aaKnown RBP7.44□□□□□ -1.22
VPS13B-209ENST00000521559 FDX1P10109 184 aa7.43□□□□□ -1.22
VPS13B-209ENST00000521559 SLC19A1P41440 591 aa7.43□□□□□ -1.22
VPS13B-209ENST00000521559 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
VPS13B-209ENST00000521559 GJA5P36382 358 aa7.42□□□□□ -1.22
VPS13B-209ENST00000521559 LAPTM4AQ15012 233 aa7.42□□□□□ -1.22
VPS13B-209ENST00000521559 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-209ENST00000521559 PPEF1O14829 653 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-209ENST00000521559 MS4A1P11836 297 aa7.41□□□□□ -1.22
VPS13B-209ENST00000521559 TBC1D2Q9BYX2 928 aa7.41□□□□□ -1.22
VPS13B-209ENST00000521559 SPDYE5A6NIY4 337 aa7.4□□□□□ -1.22
VPS13B-209ENST00000521559 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms