RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 RGS20O76081 388 aa11.42□□□□□ -0.58
CTHRC1-204ENST00000520880 OATP04181 439 aa11.41□□□□□ -0.58
CTHRC1-204ENST00000520880 METTL3Q86U44 580 aaKnown RBP11.41□□□□□ -0.58
CTHRC1-204ENST00000520880 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
CTHRC1-204ENST00000520880 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
CTHRC1-204ENST00000520880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
CTHRC1-204ENST00000520880 GPIHBP1Q8IV16 184 aa11.4□□□□□ -0.58
CTHRC1-204ENST00000520880 COPS2P61201 443 aa11.37□□□□□ -0.59
CTHRC1-204ENST00000520880 SLC10A3P09131 477 aa11.35□□□□□ -0.59
CTHRC1-204ENST00000520880 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
CTHRC1-204ENST00000520880 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
CTHRC1-204ENST00000520880 PCDHB3Q9Y5E6 796 aa11.34□□□□□ -0.59
CTHRC1-204ENST00000520880 CFHP08603 1231 aa11.33□□□□□ -0.6
CTHRC1-204ENST00000520880 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
CTHRC1-204ENST00000520880 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
CTHRC1-204ENST00000520880 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
CTHRC1-204ENST00000520880 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
CTHRC1-204ENST00000520880 ZPR1O75312 459 aa11.3□□□□□ -0.6
CTHRC1-204ENST00000520880 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
CTHRC1-204ENST00000520880 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
CTHRC1-204ENST00000520880 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
CTHRC1-204ENST00000520880 DAXXQ9UER7 740 aaPredicted RBP11.27□□□□□ -0.61
CTHRC1-204ENST00000520880 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
CTHRC1-204ENST00000520880 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
CTHRC1-204ENST00000520880 TLL1O43897 1013 aa11.24□□□□□ -0.61
CTHRC1-204ENST00000520880 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
CTHRC1-204ENST00000520880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTHRC1-204ENST00000520880 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
CTHRC1-204ENST00000520880 RSPH4AQ5TD94 716 aa11.22□□□□□ -0.61
CTHRC1-204ENST00000520880 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
CTHRC1-204ENST00000520880 IRF6O14896 467 aa11.2□□□□□ -0.62
CTHRC1-204ENST00000520880 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
CTHRC1-204ENST00000520880 PRKD2Q9BZL6 878 aa11.2□□□□□ -0.62
CTHRC1-204ENST00000520880 NR1I2O75469 434 aa11.18□□□□□ -0.62
CTHRC1-204ENST00000520880 GGCXP38435 758 aa11.18□□□□□ -0.62
CTHRC1-204ENST00000520880 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
CTHRC1-204ENST00000520880 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
CTHRC1-204ENST00000520880 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
CTHRC1-204ENST00000520880 SCUBE3Q8IX30 993 aa11.17□□□□□ -0.62
CTHRC1-204ENST00000520880 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
CTHRC1-204ENST00000520880 GCGRP47871 477 aa11.16□□□□□ -0.62
CTHRC1-204ENST00000520880 FUT2Q10981 343 aa11.16□□□□□ -0.62
CTHRC1-204ENST00000520880 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
CTHRC1-204ENST00000520880 RNF223E7ERA6 249 aa11.15□□□□□ -0.62
CTHRC1-204ENST00000520880 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
CTHRC1-204ENST00000520880 S1PR4O95977 384 aa11.14□□□□□ -0.63
CTHRC1-204ENST00000520880 ADH1BP00325 375 aa11.14□□□□□ -0.63
CTHRC1-204ENST00000520880 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
CTHRC1-204ENST00000520880 MORN1Q5T089 497 aa11.13□□□□□ -0.63
CTHRC1-204ENST00000520880 PPEF1O14829 653 aaPredicted RBP11.11□□□□□ -0.63
CTHRC1-204ENST00000520880 ATP6V1AP38606 617 aa11.11□□□□□ -0.63
CTHRC1-204ENST00000520880 CD46P15529 392 aa11.1□□□□□ -0.63
CTHRC1-204ENST00000520880 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
CTHRC1-204ENST00000520880 SPSB2Q99619 263 aa11.09□□□□□ -0.63
CTHRC1-204ENST00000520880 SLC6A16Q9GZN6 736 aa11.09□□□□□ -0.63
CTHRC1-204ENST00000520880 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
CTHRC1-204ENST00000520880 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
CTHRC1-204ENST00000520880 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
CTHRC1-204ENST00000520880 GFRA3O60609 400 aa11.06□□□□□ -0.64
CTHRC1-204ENST00000520880 ZMYND10O75800 440 aa11.06□□□□□ -0.64
CTHRC1-204ENST00000520880 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
CTHRC1-204ENST00000520880 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
CTHRC1-204ENST00000520880 SLC19A1P41440 591 aa11.04□□□□□ -0.64
CTHRC1-204ENST00000520880 Q6ZNB5 142 aa11.04□□□□□ -0.64
CTHRC1-204ENST00000520880 KRI1Q8N9T8 703 aaKnown RBP11.04□□□□□ -0.64
CTHRC1-204ENST00000520880 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
CTHRC1-204ENST00000520880 CLCN1P35523 988 aa11.03□□□□□ -0.64
CTHRC1-204ENST00000520880 LAPTM4AQ15012 233 aa11.03□□□□□ -0.64
CTHRC1-204ENST00000520880 PLA2G2CQ5R387 149 aa11.03□□□□□ -0.64
CTHRC1-204ENST00000520880 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
CTHRC1-204ENST00000520880 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
CTHRC1-204ENST00000520880 KDM4AO75164 1064 aa11.02□□□□□ -0.65
CTHRC1-204ENST00000520880 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-204ENST00000520880 RNF19BQ6ZMZ0 732 aa11.02□□□□□ -0.65
CTHRC1-204ENST00000520880 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
CTHRC1-204ENST00000520880 FAM160A2Q8N612 972 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-204ENST00000520880 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-204ENST00000520880 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
CTHRC1-204ENST00000520880 BRICD5Q6PL45 260 aa11.01□□□□□ -0.65
CTHRC1-204ENST00000520880 SPRYD7Q5W111 196 aa11□□□□□ -0.65
CTHRC1-204ENST00000520880 HLA-CQ95604 372 aa11□□□□□ -0.65
CTHRC1-204ENST00000520880 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
CTHRC1-204ENST00000520880 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
CTHRC1-204ENST00000520880 TRIM67Q6ZTA4 783 aa10.99□□□□□ -0.65
CTHRC1-204ENST00000520880 PRDM9Q9NQV7 894 aa10.99□□□□□ -0.65
CTHRC1-204ENST00000520880 LCE2BO14633 110 aa10.97□□□□□ -0.65
CTHRC1-204ENST00000520880 HOXA2O43364 376 aa10.96□□□□□ -0.65
CTHRC1-204ENST00000520880 USP46P62068 366 aa10.96□□□□□ -0.65
CTHRC1-204ENST00000520880 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.65
CTHRC1-204ENST00000520880 FCF1Q9Y324 198 aaKnown RBP10.96□□□□□ -0.65
CTHRC1-204ENST00000520880 AMHR2Q16671 573 aa10.95□□□□□ -0.66
CTHRC1-204ENST00000520880 Q3C1V9 767 aa10.95□□□□□ -0.66
CTHRC1-204ENST00000520880 MSS51Q4VC12 460 aa10.95□□□□□ -0.66
CTHRC1-204ENST00000520880 GUCA2AQ02747 115 aa10.94□□□□□ -0.66
CTHRC1-204ENST00000520880 ZNF697Q5TEC3 545 aa10.94□□□□□ -0.66
CTHRC1-204ENST00000520880 SSTR3P32745 418 aaPredicted RBP10.93□□□□□ -0.66
CTHRC1-204ENST00000520880 TTLL12Q14166 644 aaPredicted RBP10.93□□□□□ -0.66
CTHRC1-204ENST00000520880 USB1Q9BQ65 265 aaKnown RBP10.91□□□□□ -0.66
CTHRC1-204ENST00000520880 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
CTHRC1-204ENST00000520880 GIGYF2Q6Y7W6 1299 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms