RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
SHPRH-208ENST00000520752 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
SHPRH-208ENST00000520752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
SHPRH-208ENST00000520752 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
SHPRH-208ENST00000520752 TK2O00142 265 aa12.32□□□□□ -0.44
SHPRH-208ENST00000520752 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
SHPRH-208ENST00000520752 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
SHPRH-208ENST00000520752 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
SHPRH-208ENST00000520752 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
SHPRH-208ENST00000520752 FANCIQ9NVI1 1328 aa12.31□□□□□ -0.44
SHPRH-208ENST00000520752 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
SHPRH-208ENST00000520752 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
SHPRH-208ENST00000520752 GIGYF2Q6Y7W6 1299 aaKnown RBP12.29□□□□□ -0.44
SHPRH-208ENST00000520752 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
SHPRH-208ENST00000520752 DNAJB2P25686 324 aa12.27□□□□□ -0.45
SHPRH-208ENST00000520752 SMAPO00193 183 aa12.26□□□□□ -0.45
SHPRH-208ENST00000520752 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
SHPRH-208ENST00000520752 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
SHPRH-208ENST00000520752 TMEM134Q9H6X4 195 aa12.25□□□□□ -0.45
SHPRH-208ENST00000520752 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
SHPRH-208ENST00000520752 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
SHPRH-208ENST00000520752 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
SHPRH-208ENST00000520752 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
SHPRH-208ENST00000520752 RBM19Q9Y4C8 960 aaKnown RBP12.24□□□□□ -0.45
SHPRH-208ENST00000520752 MS4A1P11836 297 aa12.23□□□□□ -0.45
SHPRH-208ENST00000520752 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
SHPRH-208ENST00000520752 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
SHPRH-208ENST00000520752 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
SHPRH-208ENST00000520752 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
SHPRH-208ENST00000520752 DEKP35659 375 aaKnown RBP12.22□□□□□ -0.45
SHPRH-208ENST00000520752 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
SHPRH-208ENST00000520752 HRO43593 1189 aa12.21□□□□□ -0.45
SHPRH-208ENST00000520752 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.45
SHPRH-208ENST00000520752 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-208ENST00000520752 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
SHPRH-208ENST00000520752 PLEKHG3A1L390 1219 aa12.18□□□□□ -0.46
SHPRH-208ENST00000520752 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
SHPRH-208ENST00000520752 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
SHPRH-208ENST00000520752 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
SHPRH-208ENST00000520752 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
SHPRH-208ENST00000520752 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
SHPRH-208ENST00000520752 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
SHPRH-208ENST00000520752 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
SHPRH-208ENST00000520752 POTEMA6NI47 508 aa12.15□□□□□ -0.46
SHPRH-208ENST00000520752 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
SHPRH-208ENST00000520752 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-208ENST00000520752 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
SHPRH-208ENST00000520752 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
SHPRH-208ENST00000520752 CD46P15529 392 aa12.13□□□□□ -0.47
SHPRH-208ENST00000520752 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
SHPRH-208ENST00000520752 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
SHPRH-208ENST00000520752 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
SHPRH-208ENST00000520752 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
SHPRH-208ENST00000520752 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
SHPRH-208ENST00000520752 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
SHPRH-208ENST00000520752 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
SHPRH-208ENST00000520752 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
SHPRH-208ENST00000520752 RSPH6AQ9H0K4 717 aa12.09□□□□□ -0.47
SHPRH-208ENST00000520752 GLIPR1L2Q4G1C9 344 aa12.08□□□□□ -0.48
SHPRH-208ENST00000520752 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.48
SHPRH-208ENST00000520752 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
SHPRH-208ENST00000520752 SLC10A3P09131 477 aa12.06□□□□□ -0.48
SHPRH-208ENST00000520752 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
SHPRH-208ENST00000520752 GOLGA8CPA6NN73 597 aa12.05□□□□□ -0.48
SHPRH-208ENST00000520752 GCGRP47871 477 aa12.05□□□□□ -0.48
SHPRH-208ENST00000520752 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
SHPRH-208ENST00000520752 LRCH3Q96II8 777 aa12.05□□□□□ -0.48
SHPRH-208ENST00000520752 ANKK1Q8NFD2 765 aa12.04□□□□□ -0.48
SHPRH-208ENST00000520752 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-208ENST00000520752 NEFLP07196 543 aa12.03□□□□□ -0.48
SHPRH-208ENST00000520752 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
SHPRH-208ENST00000520752 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
SHPRH-208ENST00000520752 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
SHPRH-208ENST00000520752 SKIV2LQ15477 1246 aaKnown RBP12.02□□□□□ -0.49
SHPRH-208ENST00000520752 SOWAHBA6NEL2 793 aa12.01□□□□□ -0.49
SHPRH-208ENST00000520752 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
SHPRH-208ENST00000520752 NUTM1Q86Y26 1132 aa12.01□□□□□ -0.49
SHPRH-208ENST00000520752 WNT2BQ93097 391 aa12.01□□□□□ -0.49
SHPRH-208ENST00000520752 PCDH10Q9P2E7 1040 aa12□□□□□ -0.49
SHPRH-208ENST00000520752 KDM4AO75164 1064 aa11.99□□□□□ -0.49
SHPRH-208ENST00000520752 USP46P62068 366 aa11.99□□□□□ -0.49
SHPRH-208ENST00000520752 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
SHPRH-208ENST00000520752 RNF40O75150 1001 aa11.97□□□□□ -0.49
SHPRH-208ENST00000520752 GJA5P36382 358 aa11.97□□□□□ -0.49
SHPRH-208ENST00000520752 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.49
SHPRH-208ENST00000520752 CFHP08603 1231 aa11.96□□□□□ -0.49
SHPRH-208ENST00000520752 BCAMP50895 628 aa11.95□□□□□ -0.5
SHPRH-208ENST00000520752 PPP4CP60510 307 aa11.95□□□□□ -0.5
SHPRH-208ENST00000520752 TUSC1Q2TAM9 212 aa11.95□□□□□ -0.5
SHPRH-208ENST00000520752 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
SHPRH-208ENST00000520752 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
SHPRH-208ENST00000520752 SPTLC1O15269 473 aa11.94□□□□□ -0.5
SHPRH-208ENST00000520752 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
SHPRH-208ENST00000520752 KMT5BQ4FZB7 885 aa11.94□□□□□ -0.5
SHPRH-208ENST00000520752 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
SHPRH-208ENST00000520752 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
SHPRH-208ENST00000520752 PRR14Q9BWN1 585 aa11.93□□□□□ -0.5
SHPRH-208ENST00000520752 CDK11AQ9UQ88 783 aaPredicted RBP11.93□□□□□ -0.5
SHPRH-208ENST00000520752 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
SHPRH-208ENST00000520752 MOXD2PA6NHM9 499 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms