RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 SCAF11Q99590 1463 aaKnown RBP13.29□□□□□ -0.28
ZNF260-201ENST00000520608 SYNMO15061 1565 aa13.29□□□□□ -0.28
ZNF260-201ENST00000520608 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
ZNF260-201ENST00000520608 KANK1Q14678 1352 aa13.29□□□□□ -0.28
ZNF260-201ENST00000520608 ARHGAP31Q2M1Z3 1444 aa13.29□□□□□ -0.28
ZNF260-201ENST00000520608 STRCP1A6NGW2 1772 aa13.28□□□□□ -0.28
ZNF260-201ENST00000520608 LRRC7Q96NW7 1537 aa13.28□□□□□ -0.28
ZNF260-201ENST00000520608 MED1Q15648 1581 aaPredicted RBP13.28□□□□□ -0.28
ZNF260-201ENST00000520608 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
ZNF260-201ENST00000520608 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
ZNF260-201ENST00000520608 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
ZNF260-201ENST00000520608 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
ZNF260-201ENST00000520608 ZBTB22O15209 634 aa13.26□□□□□ -0.29
ZNF260-201ENST00000520608 SLIT1O75093 1534 aa13.26□□□□□ -0.29
ZNF260-201ENST00000520608 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
ZNF260-201ENST00000520608 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
ZNF260-201ENST00000520608 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
ZNF260-201ENST00000520608 LTKP29376 864 aa13.25□□□□□ -0.29
ZNF260-201ENST00000520608 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
ZNF260-201ENST00000520608 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
ZNF260-201ENST00000520608 TMEM2Q9UHN6 1383 aa13.22□□□□□ -0.29
ZNF260-201ENST00000520608 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
ZNF260-201ENST00000520608 LMTK2Q8IWU2 1503 aa13.22□□□□□ -0.29
ZNF260-201ENST00000520608 IDI1Q13907 227 aa13.2□□□□□ -0.3
ZNF260-201ENST00000520608 KDM5AP29375 1690 aaKnown RBP13.19□□□□□ -0.3
ZNF260-201ENST00000520608 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
ZNF260-201ENST00000520608 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
ZNF260-201ENST00000520608 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
ZNF260-201ENST00000520608 BCANQ96GW7 911 aa13.17□□□□□ -0.3
ZNF260-201ENST00000520608 SLC26A8Q96RN1 970 aa13.17□□□□□ -0.3
ZNF260-201ENST00000520608 XIRP1Q702N8 1843 aaKnown RBP13.17□□□□□ -0.3
ZNF260-201ENST00000520608 NOS1P29475 1434 aa13.16□□□□□ -0.3
ZNF260-201ENST00000520608 ANKRD50Q9ULJ7 1429 aa13.16□□□□□ -0.3
ZNF260-201ENST00000520608 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZNF260-201ENST00000520608 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
ZNF260-201ENST00000520608 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
ZNF260-201ENST00000520608 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
ZNF260-201ENST00000520608 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
ZNF260-201ENST00000520608 TET3O43151 1660 aa13.13□□□□□ -0.31
ZNF260-201ENST00000520608 KCNA6P17658 529 aa13.13□□□□□ -0.31
ZNF260-201ENST00000520608 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
ZNF260-201ENST00000520608 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
ZNF260-201ENST00000520608 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
ZNF260-201ENST00000520608 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
ZNF260-201ENST00000520608 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
ZNF260-201ENST00000520608 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
ZNF260-201ENST00000520608 UNC13BO14795 1591 aa13.1□□□□□ -0.31
ZNF260-201ENST00000520608 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
ZNF260-201ENST00000520608 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
ZNF260-201ENST00000520608 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
ZNF260-201ENST00000520608 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
ZNF260-201ENST00000520608 RIMS2Q9UQ26 1411 aa13.09□□□□□ -0.31
ZNF260-201ENST00000520608 MSH6P52701 1360 aa13.08□□□□□ -0.31
ZNF260-201ENST00000520608 ZFYVE9O95405 1425 aa13.08□□□□□ -0.32
ZNF260-201ENST00000520608 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
ZNF260-201ENST00000520608 TMEM131LA2VDJ0 1609 aa13.08□□□□□ -0.32
ZNF260-201ENST00000520608 PLEKHG1Q9ULL1 1385 aa13.07□□□□□ -0.32
ZNF260-201ENST00000520608 ITGAEP38570 1179 aa13.07□□□□□ -0.32
ZNF260-201ENST00000520608 E9PCH4 1651 aa13.06□□□□□ -0.32
ZNF260-201ENST00000520608 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
ZNF260-201ENST00000520608 ROCK1Q13464 1354 aa13.06□□□□□ -0.32
ZNF260-201ENST00000520608 IQGAP3Q86VI3 1631 aa13.05□□□□□ -0.32
ZNF260-201ENST00000520608 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
ZNF260-201ENST00000520608 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.04□□□□□ -0.32
ZNF260-201ENST00000520608 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
ZNF260-201ENST00000520608 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
ZNF260-201ENST00000520608 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
ZNF260-201ENST00000520608 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
ZNF260-201ENST00000520608 NUP155O75694 1391 aa13.03□□□□□ -0.32
ZNF260-201ENST00000520608 PHLPP1O60346 1717 aa13.02□□□□□ -0.32
ZNF260-201ENST00000520608 TBX22Q9Y458 520 aa13.01□□□□□ -0.33
ZNF260-201ENST00000520608 DIP2AQ14689 1571 aa13.01□□□□□ -0.33
ZNF260-201ENST00000520608 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
ZNF260-201ENST00000520608 EVX2Q03828 476 aa13□□□□□ -0.33
ZNF260-201ENST00000520608 TRPM2O94759 1503 aa12.98□□□□□ -0.33
ZNF260-201ENST00000520608 JCADQ9P266 1359 aa12.98□□□□□ -0.33
ZNF260-201ENST00000520608 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
ZNF260-201ENST00000520608 ATF3P18847 181 aa12.97□□□□□ -0.33
ZNF260-201ENST00000520608 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
ZNF260-201ENST00000520608 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
ZNF260-201ENST00000520608 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
ZNF260-201ENST00000520608 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
ZNF260-201ENST00000520608 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.34
ZNF260-201ENST00000520608 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
ZNF260-201ENST00000520608 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
ZNF260-201ENST00000520608 C19orf44Q9H6X5 657 aa12.95□□□□□ -0.34
ZNF260-201ENST00000520608 AMOTL2Q9Y2J4 779 aa12.95□□□□□ -0.34
ZNF260-201ENST00000520608 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
ZNF260-201ENST00000520608 PTPRUQ92729 1446 aa12.94□□□□□ -0.34
ZNF260-201ENST00000520608 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
ZNF260-201ENST00000520608 SETBP1Q9Y6X0 1596 aa12.92□□□□□ -0.34
ZNF260-201ENST00000520608 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
ZNF260-201ENST00000520608 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
ZNF260-201ENST00000520608 LRP6O75581 1613 aa12.91□□□□□ -0.34
ZNF260-201ENST00000520608 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
ZNF260-201ENST00000520608 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
ZNF260-201ENST00000520608 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
ZNF260-201ENST00000520608 DCCP43146 1447 aa12.89□□□□□ -0.35
ZNF260-201ENST00000520608 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
ZNF260-201ENST00000520608 METP08581 1390 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms