RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
SQLE-204ENST00000520493 NBR1Q14596 966 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
SQLE-204ENST00000520493 ZPR1O75312 459 aa10.11□□□□□ -0.79
SQLE-204ENST00000520493 PRSS12P56730 875 aa10.11□□□□□ -0.79
SQLE-204ENST00000520493 AAASQ9NRG9 546 aa10.11□□□□□ -0.79
SQLE-204ENST00000520493 NBPF26B4DH59 902 aa10.1□□□□□ -0.79
SQLE-204ENST00000520493 ARHGEF1Q92888 912 aaKnown RBP10.1□□□□□ -0.79
SQLE-204ENST00000520493 ZNF697Q5TEC3 545 aa10.09□□□□□ -0.79
SQLE-204ENST00000520493 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
SQLE-204ENST00000520493 INSM1Q01101 510 aaPredicted RBP10.07□□□□□ -0.8
SQLE-204ENST00000520493 LOC100996750A0A140TA64 210 aa10.06□□□□□ -0.8
SQLE-204ENST00000520493 PPEF1O14829 653 aaPredicted RBP10.06□□□□□ -0.8
SQLE-204ENST00000520493 NUDT18Q6ZVK8 323 aa10.06□□□□□ -0.8
SQLE-204ENST00000520493 KRTAP4-6Q9BYQ5 205 aa10.06□□□□□ -0.8
SQLE-204ENST00000520493 GDF9O60383 454 aa10.05□□□□□ -0.8
SQLE-204ENST00000520493 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
SQLE-204ENST00000520493 GRXCR2A6NFK2 248 aa10.04□□□□□ -0.8
SQLE-204ENST00000520493 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
SQLE-204ENST00000520493 DACH1Q9UI36 760 aa10.04□□□□□ -0.8
SQLE-204ENST00000520493 SWT1Q5T5J6 900 aaKnown RBP10.03□□□□□ -0.8
SQLE-204ENST00000520493 C11orf95C9JLR9 678 aaPredicted RBP10.01□□□□□ -0.81
SQLE-204ENST00000520493 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
SQLE-204ENST00000520493 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
SQLE-204ENST00000520493 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
SQLE-204ENST00000520493 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
SQLE-204ENST00000520493 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
SQLE-204ENST00000520493 WIPF1O43516 503 aa10□□□□□ -0.81
SQLE-204ENST00000520493 TLL1O43897 1013 aa10□□□□□ -0.81
SQLE-204ENST00000520493 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
SQLE-204ENST00000520493 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
SQLE-204ENST00000520493 GMPR2Q9P2T1 348 aaKnown RBP10□□□□□ -0.81
SQLE-204ENST00000520493 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
SQLE-204ENST00000520493 S1PR4O95977 384 aa9.98□□□□□ -0.81
SQLE-204ENST00000520493 FOXC1Q12948 553 aa9.96□□□□□ -0.82
SQLE-204ENST00000520493 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
SQLE-204ENST00000520493 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
SQLE-204ENST00000520493 OSBPP22059 807 aa9.94□□□□□ -0.82
SQLE-204ENST00000520493 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
SQLE-204ENST00000520493 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
SQLE-204ENST00000520493 AXIN1O15169 862 aa9.92□□□□□ -0.82
SQLE-204ENST00000520493 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
SQLE-204ENST00000520493 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
SQLE-204ENST00000520493 CDHR5Q9HBB8 845 aa9.91□□□□□ -0.82
SQLE-204ENST00000520493 PLA2G2CQ5R387 149 aa9.9□□□□□ -0.82
SQLE-204ENST00000520493 SMYD5Q6GMV2 418 aa9.9□□□□□ -0.82
SQLE-204ENST00000520493 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.82
SQLE-204ENST00000520493 SEMA3EO15041 775 aa9.89□□□□□ -0.83
SQLE-204ENST00000520493 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
SQLE-204ENST00000520493 RBM27Q9P2N5 1060 aaKnown RBP9.86□□□□□ -0.83
SQLE-204ENST00000520493 AVPP01185 164 aa9.85□□□□□ -0.83
SQLE-204ENST00000520493 PADI6Q6TGC4 694 aa9.85□□□□□ -0.83
SQLE-204ENST00000520493 TERTO14746 1132 aaKnown RBP9.84□□□□□ -0.83
SQLE-204ENST00000520493 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 TESPA1A2RU30 521 aaPredicted RBP9.83□□□□□ -0.84
SQLE-204ENST00000520493 FAM181BA6NEQ2 426 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 TULP1O00294 542 aaPredicted RBP9.83□□□□□ -0.84
SQLE-204ENST00000520493 ADH1BP00325 375 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 LMOD2Q6P5Q4 547 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 CYP4X1Q8N118 509 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 SLC6A16Q9GZN6 736 aa9.83□□□□□ -0.84
SQLE-204ENST00000520493 SNRPBP14678 240 aaKnown RBP9.81□□□□□ -0.84
SQLE-204ENST00000520493 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
SQLE-204ENST00000520493 TOR4AQ9NXH8 423 aa9.81□□□□□ -0.84
SQLE-204ENST00000520493 EYA1Q99502 592 aa9.8□□□□□ -0.84
SQLE-204ENST00000520493 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
SQLE-204ENST00000520493 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
SQLE-204ENST00000520493 ACTN4O43707 911 aaKnown RBP9.78□□□□□ -0.84
SQLE-204ENST00000520493 SUZ12Q15022 739 aaKnown RBP9.78□□□□□ -0.84
SQLE-204ENST00000520493 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
SQLE-204ENST00000520493 FCHSD2O94868 740 aa9.77□□□□□ -0.85
SQLE-204ENST00000520493 PTGDRQ13258 359 aa9.77□□□□□ -0.85
SQLE-204ENST00000520493 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
SQLE-204ENST00000520493 NR1I2O75469 434 aa9.75□□□□□ -0.85
SQLE-204ENST00000520493 ATP13A2Q9NQ11 1180 aa9.75□□□□□ -0.85
SQLE-204ENST00000520493 CFHP08603 1231 aa9.74□□□□□ -0.85
SQLE-204ENST00000520493 RBM26Q5T8P6 1007 aaKnown RBP9.74□□□□□ -0.85
SQLE-204ENST00000520493 CD2BP2O95400 341 aaKnown RBP9.73□□□□□ -0.85
SQLE-204ENST00000520493 RPIAP49247 311 aa9.72□□□□□ -0.85
SQLE-204ENST00000520493 ZSCAN1Q8NBB4 408 aa9.72□□□□□ -0.85
SQLE-204ENST00000520493 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
SQLE-204ENST00000520493 HIC1Q14526 733 aa9.71□□□□□ -0.86
SQLE-204ENST00000520493 SENP2Q9HC62 589 aa9.71□□□□□ -0.86
SQLE-204ENST00000520493 DNAJB2P25686 324 aa9.7□□□□□ -0.86
SQLE-204ENST00000520493 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
SQLE-204ENST00000520493 GMPRP36959 345 aa9.69□□□□□ -0.86
SQLE-204ENST00000520493 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
SQLE-204ENST00000520493 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
SQLE-204ENST00000520493 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
SQLE-204ENST00000520493 SPSB2Q99619 263 aa9.68□□□□□ -0.86
SQLE-204ENST00000520493 FCF1Q9Y324 198 aaKnown RBP9.67□□□□□ -0.86
SQLE-204ENST00000520493 GNPATO15228 680 aa9.66□□□□□ -0.86
SQLE-204ENST00000520493 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
SQLE-204ENST00000520493 TMEM134Q9H6X4 195 aa9.66□□□□□ -0.86
SQLE-204ENST00000520493 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
SQLE-204ENST00000520493 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
SQLE-204ENST00000520493 OATP04181 439 aa9.64□□□□□ -0.87
SQLE-204ENST00000520493 SMPD1P17405 629 aa9.64□□□□□ -0.87
SQLE-204ENST00000520493 SLC10A3P09131 477 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms