RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
SKP1-207ENST00000520417 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
SKP1-207ENST00000520417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
SKP1-207ENST00000520417 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
SKP1-207ENST00000520417 COPS2P61201 443 aa11.01□□□□□ -0.65
SKP1-207ENST00000520417 MTRQ99707 1265 aa11.01□□□□□ -0.65
SKP1-207ENST00000520417 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
SKP1-207ENST00000520417 CFHP08603 1231 aa10.98□□□□□ -0.65
SKP1-207ENST00000520417 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
SKP1-207ENST00000520417 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
SKP1-207ENST00000520417 PRR14Q9BWN1 585 aa10.98□□□□□ -0.65
SKP1-207ENST00000520417 IL21Q9HBE4 155 aa10.98□□□□□ -0.65
SKP1-207ENST00000520417 A0A0G2JS52 829 aa10.97□□□□□ -0.65
SKP1-207ENST00000520417 MAP2K5Q13163 448 aa10.97□□□□□ -0.65
SKP1-207ENST00000520417 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
SKP1-207ENST00000520417 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
SKP1-207ENST00000520417 PCDHB3Q9Y5E6 796 aa10.97□□□□□ -0.65
SKP1-207ENST00000520417 DDX11L8A8MPP1 907 aa10.96□□□□□ -0.65
SKP1-207ENST00000520417 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.65
SKP1-207ENST00000520417 ZNF516Q92618 1163 aa10.96□□□□□ -0.65
SKP1-207ENST00000520417 PHOX2BQ99453 314 aa10.96□□□□□ -0.65
SKP1-207ENST00000520417 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
SKP1-207ENST00000520417 SLC10A3P09131 477 aa10.95□□□□□ -0.66
SKP1-207ENST00000520417 DAXXQ9UER7 740 aaPredicted RBP10.95□□□□□ -0.66
SKP1-207ENST00000520417 IRF6O14896 467 aa10.94□□□□□ -0.66
SKP1-207ENST00000520417 MINK1Q8N4C8 1332 aaPredicted RBP10.92□□□□□ -0.66
SKP1-207ENST00000520417 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
SKP1-207ENST00000520417 CCDC102AQ96A19 550 aa10.91□□□□□ -0.66
SKP1-207ENST00000520417 ACTN4O43707 911 aaKnown RBP10.89□□□□□ -0.67
SKP1-207ENST00000520417 MDM2Q00987 491 aaPredicted RBP10.89□□□□□ -0.67
SKP1-207ENST00000520417 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
SKP1-207ENST00000520417 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
SKP1-207ENST00000520417 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
SKP1-207ENST00000520417 ZPR1O75312 459 aa10.87□□□□□ -0.67
SKP1-207ENST00000520417 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
SKP1-207ENST00000520417 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
SKP1-207ENST00000520417 TLL1O43897 1013 aa10.84□□□□□ -0.67
SKP1-207ENST00000520417 NR1I2O75469 434 aa10.83□□□□□ -0.68
SKP1-207ENST00000520417 ZMYND10O75800 440 aa10.83□□□□□ -0.68
SKP1-207ENST00000520417 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
SKP1-207ENST00000520417 FUT2Q10981 343 aa10.82□□□□□ -0.68
SKP1-207ENST00000520417 RGS20O76081 388 aa10.81□□□□□ -0.68
SKP1-207ENST00000520417 GGCXP38435 758 aa10.81□□□□□ -0.68
SKP1-207ENST00000520417 GCGRP47871 477 aa10.81□□□□□ -0.68
SKP1-207ENST00000520417 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.81□□□□□ -0.68
SKP1-207ENST00000520417 CLCN1P35523 988 aa10.79□□□□□ -0.68
SKP1-207ENST00000520417 TTLL12Q14166 644 aaPredicted RBP10.79□□□□□ -0.68
SKP1-207ENST00000520417 SCUBE3Q8IX30 993 aa10.79□□□□□ -0.68
SKP1-207ENST00000520417 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
SKP1-207ENST00000520417 ATP6V1AP38606 617 aa10.78□□□□□ -0.68
SKP1-207ENST00000520417 BCANQ96GW7 911 aa10.78□□□□□ -0.68
SKP1-207ENST00000520417 CD46P15529 392 aa10.76□□□□□ -0.69
SKP1-207ENST00000520417 S1PR4O95977 384 aa10.75□□□□□ -0.69
SKP1-207ENST00000520417 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
SKP1-207ENST00000520417 PRKD2Q9BZL6 878 aa10.75□□□□□ -0.69
SKP1-207ENST00000520417 ADH1BP00325 375 aa10.74□□□□□ -0.69
SKP1-207ENST00000520417 MORN1Q5T089 497 aa10.74□□□□□ -0.69
SKP1-207ENST00000520417 SPSB2Q99619 263 aa10.74□□□□□ -0.69
SKP1-207ENST00000520417 PPEF1O14829 653 aaPredicted RBP10.73□□□□□ -0.69
SKP1-207ENST00000520417 KDM4AO75164 1064 aa10.73□□□□□ -0.69
SKP1-207ENST00000520417 IRX2Q9BZI1 471 aaPredicted RBP10.73□□□□□ -0.69
SKP1-207ENST00000520417 SLC6A16Q9GZN6 736 aa10.73□□□□□ -0.69
SKP1-207ENST00000520417 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
SKP1-207ENST00000520417 SLC27A5Q9Y2P5 690 aa10.73□□□□□ -0.69
SKP1-207ENST00000520417 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
SKP1-207ENST00000520417 RNF223E7ERA6 249 aa10.71□□□□□ -0.69
SKP1-207ENST00000520417 NUTM1Q86Y26 1132 aa10.71□□□□□ -0.69
SKP1-207ENST00000520417 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.69
SKP1-207ENST00000520417 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
SKP1-207ENST00000520417 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
SKP1-207ENST00000520417 AK7Q96M32 723 aa10.7□□□□□ -0.7
SKP1-207ENST00000520417 SLC24A3Q9HC58 644 aa10.69□□□□□ -0.7
SKP1-207ENST00000520417 TRIM66O15016 1216 aa10.68□□□□□ -0.7
SKP1-207ENST00000520417 HLA-CQ95604 372 aa10.68□□□□□ -0.7
SKP1-207ENST00000520417 AMHR2Q16671 573 aa10.67□□□□□ -0.7
SKP1-207ENST00000520417 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
SKP1-207ENST00000520417 RNF19BQ6ZMZ0 732 aa10.66□□□□□ -0.7
SKP1-207ENST00000520417 USP46P62068 366 aa10.65□□□□□ -0.7
SKP1-207ENST00000520417 GUCA2AQ02747 115 aa10.65□□□□□ -0.7
SKP1-207ENST00000520417 Q3C1V9 767 aa10.65□□□□□ -0.7
SKP1-207ENST00000520417 HOXA2O43364 376 aa10.64□□□□□ -0.71
SKP1-207ENST00000520417 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
SKP1-207ENST00000520417 THAP11Q96EK4 314 aa10.64□□□□□ -0.71
SKP1-207ENST00000520417 V9GY48 417 aaPredicted RBP10.64□□□□□ -0.71
SKP1-207ENST00000520417 SLC19A1P41440 591 aa10.63□□□□□ -0.71
SKP1-207ENST00000520417 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
SKP1-207ENST00000520417 PARP9Q8IXQ6 854 aa10.63□□□□□ -0.71
SKP1-207ENST00000520417 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
SKP1-207ENST00000520417 FAM160A2Q8N612 972 aaPredicted RBP10.62□□□□□ -0.71
SKP1-207ENST00000520417 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
SKP1-207ENST00000520417 GFRA3O60609 400 aa10.6□□□□□ -0.71
SKP1-207ENST00000520417 PDE4DQ08499 809 aa10.6□□□□□ -0.71
SKP1-207ENST00000520417 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
SKP1-207ENST00000520417 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
SKP1-207ENST00000520417 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
SKP1-207ENST00000520417 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
SKP1-207ENST00000520417 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
SKP1-207ENST00000520417 FDX1P10109 184 aa10.57□□□□□ -0.72
SKP1-207ENST00000520417 MS4A1P11836 297 aa10.57□□□□□ -0.72
SKP1-207ENST00000520417 NDUFV2P19404 249 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms