RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 SNAPC4Q5SXM2 1469 aa7.67□□□□□ -1.18
TRAPPC2-208ENST00000519885 RUSC2Q8N2Y8 1516 aa7.67□□□□□ -1.18
TRAPPC2-208ENST00000519885 NUTM2FA1L443 756 aa7.66□□□□□ -1.18
TRAPPC2-208ENST00000519885 IRF6O14896 467 aa7.66□□□□□ -1.18
TRAPPC2-208ENST00000519885 LSM11P83369 360 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRAPPC2-208ENST00000519885 GRIN2AQ12879 1464 aa7.66□□□□□ -1.18
TRAPPC2-208ENST00000519885 CLIP1P30622 1438 aa7.65□□□□□ -1.18
TRAPPC2-208ENST00000519885 IQGAP2Q13576 1575 aa7.65□□□□□ -1.18
TRAPPC2-208ENST00000519885 HIC1Q14526 733 aa7.65□□□□□ -1.18
TRAPPC2-208ENST00000519885 GOPCQ9HD26 462 aa7.65□□□□□ -1.18
TRAPPC2-208ENST00000519885 ZNF608Q9ULD9 1512 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC2-208ENST00000519885 AQRO60306 1485 aaKnown RBP eCLIP7.64□□□□□ -1.19
TRAPPC2-208ENST00000519885 GNPATO15228 680 aa7.64□□□□□ -1.19
TRAPPC2-208ENST00000519885 FCHSD2O94868 740 aa7.64□□□□□ -1.19
TRAPPC2-208ENST00000519885 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
TRAPPC2-208ENST00000519885 KIAA0586Q9BVV6 1533 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 PLEKHG3A1L390 1219 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 PSDA5PKW4 1024 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 SLC34A2O95436 690 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 OSBPP22059 807 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 PARP9Q8IXQ6 854 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 OXER1Q8TDS5 423 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 DDX12PQ92771 950 aa7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 KHSRPQ92945 711 aaKnown RBP eCLIP7.63□□□□□ -1.19
TRAPPC2-208ENST00000519885 NUP160Q12769 1436 aa7.62□□□□□ -1.19
TRAPPC2-208ENST00000519885 NUDT7P0C024 238 aa7.62□□□□□ -1.19
TRAPPC2-208ENST00000519885 CHMP7Q8WUX9 453 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC2-208ENST00000519885 FMN1Q68DA7 1419 aa7.61□□□□□ -1.19
TRAPPC2-208ENST00000519885 UGGT2Q9NYU1 1516 aa7.61□□□□□ -1.19
TRAPPC2-208ENST00000519885 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
TRAPPC2-208ENST00000519885 VPS8Q8N3P4 1428 aa7.61□□□□□ -1.19
TRAPPC2-208ENST00000519885 PCDHGA4Q9Y5G9 962 aa7.6□□□□□ -1.19
TRAPPC2-208ENST00000519885 SAMD9Q5K651 1589 aa7.59□□□□□ -1.19
TRAPPC2-208ENST00000519885 TBC1D12O60347 775 aa7.59□□□□□ -1.19
TRAPPC2-208ENST00000519885 EVI5O60447 810 aa7.59□□□□□ -1.19
TRAPPC2-208ENST00000519885 FECHP22830 423 aa7.59□□□□□ -1.19
TRAPPC2-208ENST00000519885 TTLL12Q14166 644 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC2-208ENST00000519885 LHX6Q9UPM6 363 aa7.59□□□□□ -1.19
TRAPPC2-208ENST00000519885 PRIM1P49642 420 aaKnown RBP7.58□□□□□ -1.2
TRAPPC2-208ENST00000519885 HCSTQ9UBK5 93 aa7.58□□□□□ -1.2
TRAPPC2-208ENST00000519885 FYCO1Q9BQS8 1478 aa7.57□□□□□ -1.2
TRAPPC2-208ENST00000519885 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC2-208ENST00000519885 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
TRAPPC2-208ENST00000519885 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
TRAPPC2-208ENST00000519885 LOC105371045A0A1W2PR82 267 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 A6NJR5 290 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 ARID3AQ99856 593 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 C1orf115Q9H7X2 142 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 KIAA0556O60303 1618 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 CHD1O14646 1710 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 CCDC18Q5T9S5 1454 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 ARHGAP35Q9NRY4 1499 aa7.55□□□□□ -1.2
TRAPPC2-208ENST00000519885 CEP170Q5SW79 1584 aa7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 HECW1Q76N89 1606 aa7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 APBB1O00213 710 aa7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 ONECUT3O60422 494 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 RANGAP1P46060 587 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 GIGYF2Q6Y7W6 1299 aaKnown RBP7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 AXIN2Q9Y2T1 843 aa7.54□□□□□ -1.2
TRAPPC2-208ENST00000519885 SHROOM2Q13796 1616 aa7.53□□□□□ -1.2
TRAPPC2-208ENST00000519885 PTGDRQ13258 359 aa7.53□□□□□ -1.2
TRAPPC2-208ENST00000519885 ADGRD1Q6QNK2 874 aa7.53□□□□□ -1.2
TRAPPC2-208ENST00000519885 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
TRAPPC2-208ENST00000519885 STAC3Q96MF2 364 aa7.53□□□□□ -1.2
TRAPPC2-208ENST00000519885 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
TRAPPC2-208ENST00000519885 ARAP1Q96P48 1450 aa7.52□□□□□ -1.21
TRAPPC2-208ENST00000519885 TK2O00142 265 aa7.52□□□□□ -1.21
TRAPPC2-208ENST00000519885 ANO8Q9HCE9 1232 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC2-208ENST00000519885 CLASP1Q7Z460 1538 aa7.52□□□□□ -1.21
TRAPPC2-208ENST00000519885 CASKIN1Q8WXD9 1431 aa7.52□□□□□ -1.21
TRAPPC2-208ENST00000519885 CLCN1P35523 988 aa7.51□□□□□ -1.21
TRAPPC2-208ENST00000519885 TRIM26Q12899 539 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC2-208ENST00000519885 SH3D19Q5HYK7 790 aa7.51□□□□□ -1.21
TRAPPC2-208ENST00000519885 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
TRAPPC2-208ENST00000519885 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
TRAPPC2-208ENST00000519885 POTEEQ6S8J3 1075 aa7.5□□□□□ -1.21
TRAPPC2-208ENST00000519885 TRAK2O60296 914 aa7.49□□□□□ -1.21
TRAPPC2-208ENST00000519885 MS4A1P11836 297 aa7.49□□□□□ -1.21
TRAPPC2-208ENST00000519885 RBM33Q96EV2 1170 aaKnown RBP7.49□□□□□ -1.21
TRAPPC2-208ENST00000519885 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
TRAPPC2-208ENST00000519885 DISP1Q96F81 1524 aa7.48□□□□□ -1.21
TRAPPC2-208ENST00000519885 CFAP43Q8NDM7 1665 aa7.48□□□□□ -1.21
TRAPPC2-208ENST00000519885 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC2-208ENST00000519885 CDK11AQ9UQ88 783 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC2-208ENST00000519885 PCF11O94913 1555 aaKnown RBP7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 FHOD3Q2V2M9 1422 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 MAP3K7O43318 606 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 MCM6Q14566 821 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 JPH4Q96JJ6 628 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 EPAS1Q99814 870 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 GPCPD1Q9NPB8 672 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 EHBP1L1Q8N3D4 1523 aa7.47□□□□□ -1.21
TRAPPC2-208ENST00000519885 TIAM1Q13009 1591 aa7.46□□□□□ -1.21
TRAPPC2-208ENST00000519885 PRG4Q92954 1404 aaPredicted RBP7.46□□□□□ -1.21
TRAPPC2-208ENST00000519885 PHF14O94880 888 aa7.46□□□□□ -1.22
TRAPPC2-208ENST00000519885 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
TRAPPC2-208ENST00000519885 EN1Q05925 392 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC2-208ENST00000519885 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
TRAPPC2-208ENST00000519885 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms