RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 COPS2P61201 443 aa12.47□□□□□ -0.41
VPS37A-205ENST00000519515 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
VPS37A-205ENST00000519515 GNPATO15228 680 aa12.45□□□□□ -0.42
VPS37A-205ENST00000519515 FECHP22830 423 aa12.45□□□□□ -0.42
VPS37A-205ENST00000519515 PXYLP1Q8TE99 480 aa12.45□□□□□ -0.42
VPS37A-205ENST00000519515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
VPS37A-205ENST00000519515 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
VPS37A-205ENST00000519515 NKX2-3Q8TAU0 364 aa12.43□□□□□ -0.42
VPS37A-205ENST00000519515 GPR37O15354 613 aa12.42□□□□□ -0.42
VPS37A-205ENST00000519515 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
VPS37A-205ENST00000519515 PCDHB3Q9Y5E6 796 aa12.42□□□□□ -0.42
VPS37A-205ENST00000519515 METTL3Q86U44 580 aaKnown RBP12.41□□□□□ -0.42
VPS37A-205ENST00000519515 ZPR1O75312 459 aa12.39□□□□□ -0.43
VPS37A-205ENST00000519515 SLC10A3P09131 477 aa12.39□□□□□ -0.43
VPS37A-205ENST00000519515 CFHP08603 1231 aa12.38□□□□□ -0.43
VPS37A-205ENST00000519515 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
VPS37A-205ENST00000519515 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
VPS37A-205ENST00000519515 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
VPS37A-205ENST00000519515 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
VPS37A-205ENST00000519515 ACTN4O43707 911 aaKnown RBP12.36□□□□□ -0.43
VPS37A-205ENST00000519515 PRKD2Q9BZL6 878 aa12.34□□□□□ -0.43
VPS37A-205ENST00000519515 GGCXP38435 758 aa12.32□□□□□ -0.44
VPS37A-205ENST00000519515 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
VPS37A-205ENST00000519515 NLRP7Q8WX94 980 aa12.32□□□□□ -0.44
VPS37A-205ENST00000519515 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
VPS37A-205ENST00000519515 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
VPS37A-205ENST00000519515 PHOX2BQ99453 314 aa12.29□□□□□ -0.44
VPS37A-205ENST00000519515 TLL1O43897 1013 aa12.28□□□□□ -0.44
VPS37A-205ENST00000519515 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
VPS37A-205ENST00000519515 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
VPS37A-205ENST00000519515 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
VPS37A-205ENST00000519515 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
VPS37A-205ENST00000519515 NR1I2O75469 434 aa12.25□□□□□ -0.45
VPS37A-205ENST00000519515 PUS10Q3MIT2 529 aaKnown RBP12.25□□□□□ -0.45
VPS37A-205ENST00000519515 RNF223E7ERA6 249 aa12.23□□□□□ -0.45
VPS37A-205ENST00000519515 GFRA3O60609 400 aa12.23□□□□□ -0.45
VPS37A-205ENST00000519515 SCUBE3Q8IX30 993 aa12.23□□□□□ -0.45
VPS37A-205ENST00000519515 Q6ZNB5 142 aa12.22□□□□□ -0.45
VPS37A-205ENST00000519515 PPEF1O14829 653 aaPredicted RBP12.2□□□□□ -0.46
VPS37A-205ENST00000519515 S1PR4O95977 384 aa12.2□□□□□ -0.46
VPS37A-205ENST00000519515 ADH1BP00325 375 aa12.2□□□□□ -0.46
VPS37A-205ENST00000519515 MAP2K5Q13163 448 aa12.2□□□□□ -0.46
VPS37A-205ENST00000519515 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
VPS37A-205ENST00000519515 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
VPS37A-205ENST00000519515 IRF6O14896 467 aa12.18□□□□□ -0.46
VPS37A-205ENST00000519515 GCGRP47871 477 aa12.18□□□□□ -0.46
VPS37A-205ENST00000519515 FUT2Q10981 343 aa12.18□□□□□ -0.46
VPS37A-205ENST00000519515 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
VPS37A-205ENST00000519515 MORN1Q5T089 497 aa12.16□□□□□ -0.46
VPS37A-205ENST00000519515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS37A-205ENST00000519515 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
VPS37A-205ENST00000519515 SLC6A16Q9GZN6 736 aa12.16□□□□□ -0.46
VPS37A-205ENST00000519515 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
VPS37A-205ENST00000519515 SLC19A1P41440 591 aa12.15□□□□□ -0.46
VPS37A-205ENST00000519515 SPSB2Q99619 263 aa12.15□□□□□ -0.46
VPS37A-205ENST00000519515 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
VPS37A-205ENST00000519515 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
VPS37A-205ENST00000519515 SLC27A5Q9Y2P5 690 aa12.12□□□□□ -0.47
VPS37A-205ENST00000519515 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
VPS37A-205ENST00000519515 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
VPS37A-205ENST00000519515 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
VPS37A-205ENST00000519515 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
VPS37A-205ENST00000519515 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
VPS37A-205ENST00000519515 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
VPS37A-205ENST00000519515 CD46P15529 392 aa12.08□□□□□ -0.48
VPS37A-205ENST00000519515 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
VPS37A-205ENST00000519515 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
VPS37A-205ENST00000519515 GRIPAP1Q4V328 841 aa12.07□□□□□ -0.48
VPS37A-205ENST00000519515 TRAF7Q6Q0C0 670 aa12.07□□□□□ -0.48
VPS37A-205ENST00000519515 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
VPS37A-205ENST00000519515 ZNF598Q86UK7 904 aaKnown RBP12.06□□□□□ -0.48
VPS37A-205ENST00000519515 LCE2BO14633 110 aa12.05□□□□□ -0.48
VPS37A-205ENST00000519515 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
VPS37A-205ENST00000519515 FAM160A2Q8N612 972 aaPredicted RBP12.05□□□□□ -0.48
VPS37A-205ENST00000519515 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
VPS37A-205ENST00000519515 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
VPS37A-205ENST00000519515 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
VPS37A-205ENST00000519515 KDM4AO75164 1064 aa12.02□□□□□ -0.49
VPS37A-205ENST00000519515 ZNF697Q5TEC3 545 aa12.02□□□□□ -0.49
VPS37A-205ENST00000519515 RNF19BQ6ZMZ0 732 aa12.02□□□□□ -0.49
VPS37A-205ENST00000519515 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
VPS37A-205ENST00000519515 CLCN1P35523 988 aa12□□□□□ -0.49
VPS37A-205ENST00000519515 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
VPS37A-205ENST00000519515 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
VPS37A-205ENST00000519515 Q3C1V9 767 aa11.98□□□□□ -0.49
VPS37A-205ENST00000519515 BARGINQ6ZT62 677 aa11.98□□□□□ -0.49
VPS37A-205ENST00000519515 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
VPS37A-205ENST00000519515 ZC3H15Q8WU90 426 aaKnown RBP11.97□□□□□ -0.49
VPS37A-205ENST00000519515 ZMYND10O75800 440 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 PRR20EP86478 221 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 PRR20CP86479 221 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 PRR20DP86480 221 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 PRR20BP86481 221 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 PRR20AP86496 221 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 MSS51Q4VC12 460 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 HLA-CQ95604 372 aa11.96□□□□□ -0.49
VPS37A-205ENST00000519515 TNFRSF10AO00220 468 aa11.95□□□□□ -0.5
VPS37A-205ENST00000519515 GDF9O60383 454 aa11.95□□□□□ -0.5
VPS37A-205ENST00000519515 USP46P62068 366 aa11.95□□□□□ -0.5
VPS37A-205ENST00000519515 REPIN1Q9BWE0 567 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms