RNA–Protein interactions for RNA: ENST00000519148.5

TOP1MT-208, Transcript of DNA topoisomerase I mitochondrial, human

TSL 2 BASIC

Gene TOP1MT, Length 1,868 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOP1MT-208	ENST00000519148	GPRASP1	Q5JY77	1395 aa		34.18	■■■■□ 3.06
TOP1MT-208	ENST00000519148	USP47	Q96K76	1375 aa		34.18	■■■■□ 3.06
TOP1MT-208	ENST00000519148	ZMYM3	Q14202	1370 aa		34.17	■■■■□ 3.06
TOP1MT-208	ENST00000519148	CARD11	Q9BXL7	1154 aa		34.16	■■■■□ 3.06
TOP1MT-208	ENST00000519148	KIAA1210	Q9ULL0	1709 aa		34.16	■■■■□ 3.06
TOP1MT-208	ENST00000519148	IDI1	Q13907	227 aa		34.16	■■■■□ 3.06
TOP1MT-208	ENST00000519148	TMEM131L	A2VDJ0	1609 aa		34.15	■■■■□ 3.06
TOP1MT-208	ENST00000519148	CHGA	P10645	457 aa	Known RBP	34.15	■■■■□ 3.06
TOP1MT-208	ENST00000519148	MYO5B	Q9ULV0	1848 aa		34.15	■■■■□ 3.06
TOP1MT-208	ENST00000519148	C11orf95	C9JLR9	678 aa	Predicted RBP	34.14	■■■■□ 3.06
TOP1MT-208	ENST00000519148	NRXN1	Q9ULB1	1477 aa		34.13	■■■■□ 3.05
TOP1MT-208	ENST00000519148	RPGRIP1L	Q68CZ1	1315 aa		34.12	■■■■□ 3.05
TOP1MT-208	ENST00000519148	FER1L4	A9Z1Z3	1794 aa		34.12	■■■■□ 3.05
TOP1MT-208	ENST00000519148	NBPF1	Q3BBV0	1214 aa		34.09	■■■■□ 3.05
TOP1MT-208	ENST00000519148	KIF7	Q2M1P5	1343 aa		34.08	■■■■□ 3.05
TOP1MT-208	ENST00000519148	NEXMIF	Q5QGS0	1516 aa		34.08	■■■■□ 3.05
TOP1MT-208	ENST00000519148	ADGRF5	Q8IZF2	1346 aa		34.05	■■■■□ 3.04
TOP1MT-208	ENST00000519148	C3	P01024	1663 aa		34.01	■■■■□ 3.04
TOP1MT-208	ENST00000519148	IQGAP1	P46940	1657 aa		34.01	■■■■□ 3.04
TOP1MT-208	ENST00000519148	PIK3C2G	O75747	1445 aa		33.99	■■■■□ 3.03
TOP1MT-208	ENST00000519148	ZFYVE9	O95405	1425 aa		33.97	■■■■□ 3.03
TOP1MT-208	ENST00000519148	TNR	Q92752	1358 aa		33.96	■■■■□ 3.03
TOP1MT-208	ENST00000519148	KDM5A	P29375	1690 aa	Known RBP	33.95	■■■■□ 3.02
TOP1MT-208	ENST00000519148	A2ML1	A8K2U0	1454 aa		33.94	■■■■□ 3.02
TOP1MT-208	ENST00000519148	SETBP1	Q9Y6X0	1596 aa		33.93	■■■■□ 3.02
TOP1MT-208	ENST00000519148	ST20-MTHFS	A0A0A6YYL1	179 aa		33.93	■■■■□ 3.02
TOP1MT-208	ENST00000519148	VGF	O15240	615 aa	Predicted RBP	33.93	■■■■□ 3.02
TOP1MT-208	ENST00000519148	SCAF11	Q99590	1463 aa	Known RBP	33.9	■■■■□ 3.02
TOP1MT-208	ENST00000519148	CFAP70	Q5T0N1	1121 aa		33.9	■■■■□ 3.02
TOP1MT-208	ENST00000519148	STAG3	Q9UJ98	1225 aa		33.9	■■■■□ 3.02
TOP1MT-208	ENST00000519148	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.88	■■■■□ 3.01
TOP1MT-208	ENST00000519148	ADAMTSL3	P82987	1691 aa		33.87	■■■■□ 3.01
TOP1MT-208	ENST00000519148	UBR1	Q8IWV7	1749 aa		33.85	■■■■□ 3.01
TOP1MT-208	ENST00000519148	C14orf93	Q9H972	538 aa	Known RBP	33.85	■■■■□ 3.01
TOP1MT-208	ENST00000519148	RIMS1	Q86UR5	1692 aa	Known RBP	33.85	■■■■□ 3.01
TOP1MT-208	ENST00000519148	NLRP1	Q9C000	1473 aa		33.85	■■■■□ 3.01
TOP1MT-208	ENST00000519148	CEBPA	P49715	358 aa	Predicted RBP	33.83	■■■■□ 3.01
TOP1MT-208	ENST00000519148	ADGRB1	O14514	1584 aa		33.83	■■■■□ 3.01
TOP1MT-208	ENST00000519148	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.82	■■■■□ 3
TOP1MT-208	ENST00000519148	RIMS2	Q9UQ26	1411 aa		33.79	■■■■□ 3
TOP1MT-208	ENST00000519148	EIF3A	Q14152	1382 aa	Known RBP	33.78	■■■■□ 3
TOP1MT-208	ENST00000519148	TESK2	Q96S53	571 aa		33.77	■■■■□ 3
TOP1MT-208	ENST00000519148	MYO3A	Q8NEV4	1616 aa		33.75	■■■□□ 2.99
TOP1MT-208	ENST00000519148	POLR3GL	Q9BT43	218 aa		33.72	■■■□□ 2.99
TOP1MT-208	ENST00000519148	SUPT16H	Q9Y5B9	1047 aa	Known RBP	33.71	■■■□□ 2.99
TOP1MT-208	ENST00000519148	ASXL1	Q8IXJ9	1541 aa		33.69	■■■□□ 2.98
TOP1MT-208	ENST00000519148	ALK	Q9UM73	1620 aa		33.68	■■■□□ 2.98
TOP1MT-208	ENST00000519148	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.68	■■■□□ 2.98
TOP1MT-208	ENST00000519148	TMEM2	Q9UHN6	1383 aa		33.67	■■■□□ 2.98
TOP1MT-208	ENST00000519148	DISP3	Q9P2K9	1392 aa		33.66	■■■□□ 2.98
TOP1MT-208	ENST00000519148	SETD1A	O15047	1707 aa	Known RBP	33.65	■■■□□ 2.98
TOP1MT-208	ENST00000519148	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.65	■■■□□ 2.98
TOP1MT-208	ENST00000519148	CCDC184	Q52MB2	194 aa		33.65	■■■□□ 2.98
TOP1MT-208	ENST00000519148	MRS2	Q9HD23	443 aa		33.65	■■■□□ 2.98
TOP1MT-208	ENST00000519148	TMEM132E	Q6IEE7	984 aa		33.64	■■■□□ 2.98
TOP1MT-208	ENST00000519148	PLPPR3	Q6T4P5	718 aa		33.64	■■■□□ 2.98
TOP1MT-208	ENST00000519148	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.64	■■■□□ 2.98
TOP1MT-208	ENST00000519148	NRXN3	Q9Y4C0	1643 aa		33.63	■■■□□ 2.97
TOP1MT-208	ENST00000519148	TMF1	P82094	1093 aa		33.63	■■■□□ 2.97
TOP1MT-208	ENST00000519148	HDGF	P51858	240 aa	Known RBP	33.63	■■■□□ 2.97
TOP1MT-208	ENST00000519148	SBNO2	Q9Y2G9	1366 aa		33.6	■■■□□ 2.97
TOP1MT-208	ENST00000519148	SLIT1	O75093	1534 aa		33.59	■■■□□ 2.97
TOP1MT-208	ENST00000519148	QRICH2	Q9H0J4	1663 aa		33.59	■■■□□ 2.97
TOP1MT-208	ENST00000519148	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.58	■■■□□ 2.97
TOP1MT-208	ENST00000519148	PTPRM	P28827	1452 aa		33.57	■■■□□ 2.96
TOP1MT-208	ENST00000519148	ARHGAP23	Q9P227	1491 aa		33.57	■■■□□ 2.96
TOP1MT-208	ENST00000519148	SLC24A1	O60721	1099 aa		33.56	■■■□□ 2.96
TOP1MT-208	ENST00000519148	TRAK1	Q9UPV9	953 aa		33.56	■■■□□ 2.96
TOP1MT-208	ENST00000519148	ZNF142	P52746	1687 aa	Predicted RBP	33.56	■■■□□ 2.96
TOP1MT-208	ENST00000519148	SETD1B	Q9UPS6	1966 aa	Known RBP	33.56	■■■□□ 2.96
TOP1MT-208	ENST00000519148	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.55	■■■□□ 2.96
TOP1MT-208	ENST00000519148	SENP3	Q9H4L4	574 aa	Predicted RBP	33.53	■■■□□ 2.96
TOP1MT-208	ENST00000519148	KTN1	Q86UP2	1357 aa	Known RBP	33.53	■■■□□ 2.96
TOP1MT-208	ENST00000519148	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.52	■■■□□ 2.96
TOP1MT-208	ENST00000519148	CDCA8	Q53HL2	280 aa		33.5	■■■□□ 2.95
TOP1MT-208	ENST00000519148	PELP1	Q8IZL8	1130 aa	Known RBP	33.5	■■■□□ 2.95
TOP1MT-208	ENST00000519148	FAM9B	Q8IZU0	186 aa		33.5	■■■□□ 2.95
TOP1MT-208	ENST00000519148	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.5	■■■□□ 2.95
TOP1MT-208	ENST00000519148	PLEKHG1	Q9ULL1	1385 aa		33.48	■■■□□ 2.95
TOP1MT-208	ENST00000519148	LTK	P29376	864 aa		33.46	■■■□□ 2.95
TOP1MT-208	ENST00000519148	NEFL	P07196	543 aa		33.45	■■■□□ 2.95
TOP1MT-208	ENST00000519148	MYOM1	P52179	1685 aa		33.44	■■■□□ 2.94
TOP1MT-208	ENST00000519148	EID1	Q9Y6B2	187 aa		33.44	■■■□□ 2.94
TOP1MT-208	ENST00000519148	DLC1	Q96QB1	1528 aa		33.43	■■■□□ 2.94
TOP1MT-208	ENST00000519148	TXNDC2	Q86VQ3	553 aa		33.43	■■■□□ 2.94
TOP1MT-208	ENST00000519148	LRPPRC	P42704	1394 aa	Known RBP	33.43	■■■□□ 2.94
TOP1MT-208	ENST00000519148	STK26	Q9P289	416 aa		33.42	■■■□□ 2.94
TOP1MT-208	ENST00000519148	ADAMTS13	Q76LX8	1427 aa		33.41	■■■□□ 2.94
TOP1MT-208	ENST00000519148	RALBP1	Q15311	655 aa		33.41	■■■□□ 2.94
TOP1MT-208	ENST00000519148	KNDC1	Q76NI1	1749 aa		33.41	■■■□□ 2.94
TOP1MT-208	ENST00000519148	ZBED9	Q6R2W3	1325 aa		33.4	■■■□□ 2.94
TOP1MT-208	ENST00000519148	FKBP8	Q14318	412 aa		33.39	■■■□□ 2.94
TOP1MT-208	ENST00000519148	MET	P08581	1390 aa		33.39	■■■□□ 2.94
TOP1MT-208	ENST00000519148	MED14	O60244	1454 aa		33.37	■■■□□ 2.93
TOP1MT-208	ENST00000519148	ABCC11	Q96J66	1382 aa		33.37	■■■□□ 2.93
TOP1MT-208	ENST00000519148	CNGB1	Q14028	1251 aa	Predicted RBP	33.35	■■■□□ 2.93
TOP1MT-208	ENST00000519148	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.35	■■■□□ 2.93
TOP1MT-208	ENST00000519148	BCAN	Q96GW7	911 aa		33.35	■■■□□ 2.93
TOP1MT-208	ENST00000519148	TULP4	Q9NRJ4	1543 aa		33.34	■■■□□ 2.93
TOP1MT-208	ENST00000519148	DIP2A	Q14689	1571 aa		33.33	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms